RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
SOX2-OT-244ENST00000627738 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 FYB1O15117 783 aa13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 GGNBP2Q9H3C7 697 aa13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 ANKARQ7Z5J8 1434 aa13.37□□□□□ -0.27
SOX2-OT-244ENST00000627738 ITSN1Q15811 1721 aa13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 IFNL1Q8IU54 200 aa13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 EDC4Q6P2E9 1401 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 ACEP12821 1306 aa13.36□□□□□ -0.27
SOX2-OT-244ENST00000627738 TNNT2P45379 298 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-244ENST00000627738 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
SOX2-OT-244ENST00000627738 MON2Q7Z3U7 1717 aa13.35□□□□□ -0.27
SOX2-OT-244ENST00000627738 STRCP1A6NGW2 1772 aa13.35□□□□□ -0.27
SOX2-OT-244ENST00000627738 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-244ENST00000627738 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
SOX2-OT-244ENST00000627738 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
SOX2-OT-244ENST00000627738 FAM163AQ96GL9 167 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-244ENST00000627738 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.28
SOX2-OT-244ENST00000627738 TMEM94Q12767 1356 aa13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 NME9Q86XW9 330 aa13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 NGDNQ8NEJ9 315 aaKnown RBP13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 ZFP91Q96JP5 570 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 POLR3AO14802 1390 aaPredicted RBP13.32□□□□□ -0.28
SOX2-OT-244ENST00000627738 USP6P35125 1406 aa13.31□□□□□ -0.28
SOX2-OT-244ENST00000627738 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-244ENST00000627738 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
SOX2-OT-244ENST00000627738 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
SOX2-OT-244ENST00000627738 TMEM106CQ9BVX2 250 aa13.3□□□□□ -0.28
SOX2-OT-244ENST00000627738 C19orf44Q9H6X5 657 aa13.3□□□□□ -0.28
SOX2-OT-244ENST00000627738 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
SOX2-OT-244ENST00000627738 MTHFSP49914 203 aa13.29□□□□□ -0.28
SOX2-OT-244ENST00000627738 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-244ENST00000627738 SSH2Q76I76 1423 aa13.29□□□□□ -0.28
SOX2-OT-244ENST00000627738 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
SOX2-OT-244ENST00000627738 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOX2-OT-244ENST00000627738 ESCO1Q5FWF5 840 aa13.28□□□□□ -0.28
SOX2-OT-244ENST00000627738 COG3Q96JB2 828 aa13.28□□□□□ -0.28
SOX2-OT-244ENST00000627738 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
SOX2-OT-244ENST00000627738 ZNF335Q9H4Z2 1342 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-244ENST00000627738 ATF3P18847 181 aa13.26□□□□□ -0.29
SOX2-OT-244ENST00000627738 TTC21AQ8NDW8 1320 aa13.26□□□□□ -0.29
SOX2-OT-244ENST00000627738 CFAP53Q96M91 514 aa13.26□□□□□ -0.29
SOX2-OT-244ENST00000627738 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
SOX2-OT-244ENST00000627738 LRRC7Q96NW7 1537 aa13.25□□□□□ -0.29
SOX2-OT-244ENST00000627738 C1orf167Q5SNV9 1468 aa13.25□□□□□ -0.29
SOX2-OT-244ENST00000627738 INSRP06213 1382 aa13.25□□□□□ -0.29
SOX2-OT-244ENST00000627738 FBLN1P23142 703 aa13.25□□□□□ -0.29
SOX2-OT-244ENST00000627738 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
SOX2-OT-244ENST00000627738 DCCP43146 1447 aa13.24□□□□□ -0.29
SOX2-OT-244ENST00000627738 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
SOX2-OT-244ENST00000627738 MSH6P52701 1360 aa13.24□□□□□ -0.29
SOX2-OT-244ENST00000627738 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
SOX2-OT-244ENST00000627738 SENP3-EIF4A1A0A087X0R7 540 aa13.24□□□□□ -0.29
SOX2-OT-244ENST00000627738 IER5LQ5T953 404 aa13.24□□□□□ -0.29
SOX2-OT-244ENST00000627738 OVOS2A0A0J9YW53 1432 aa13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 MST1RQ04912 1400 aa13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 OVOS2Q6IE36 1432 aa13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 XIRP1Q702N8 1843 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 CADPS2Q86UW7 1296 aa13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
SOX2-OT-244ENST00000627738 AATKQ6ZMQ8 1374 aa13.22□□□□□ -0.29
SOX2-OT-244ENST00000627738 SHPRHQ149N8 1683 aa13.22□□□□□ -0.29
SOX2-OT-244ENST00000627738 PSME1Q06323 249 aa13.22□□□□□ -0.29
SOX2-OT-244ENST00000627738 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
SOX2-OT-244ENST00000627738 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-244ENST00000627738 VSIG10Q8N0Z9 540 aa13.21□□□□□ -0.29
SOX2-OT-244ENST00000627738 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.3
SOX2-OT-244ENST00000627738 PIK3C2AO00443 1686 aa13.21□□□□□ -0.3
SOX2-OT-244ENST00000627738 MAP2P11137 1827 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 FOXO3O43524 673 aa13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 RRS1Q15050 365 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 EMILIN1Q9Y6C2 1016 aa13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 PNPLA6Q8IY17 1366 aa13.2□□□□□ -0.3
SOX2-OT-244ENST00000627738 NLRP6P59044 892 aa13.19□□□□□ -0.3
SOX2-OT-244ENST00000627738 NUTM2GQ5VZR2 741 aa13.19□□□□□ -0.3
SOX2-OT-244ENST00000627738 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
SOX2-OT-244ENST00000627738 TSHZ2Q9NRE2 1034 aa13.19□□□□□ -0.3
SOX2-OT-244ENST00000627738 SMG6Q86US8 1419 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-244ENST00000627738 SOX12O15370 315 aa13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 DIAPH1O60610 1272 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 PLCG2P16885 1265 aa13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 PSEN1P49768 467 aa13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 KRT28Q7Z3Y7 464 aa13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
SOX2-OT-244ENST00000627738 SALL2Q9Y467 1007 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms