RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 CGNL1Q0VF96 1302 aa11.11□□□□□ -0.63
CHD2-209ENST00000627185 SLAIN1Q8ND83 568 aa11.11□□□□□ -0.63
CHD2-209ENST00000627185 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
CHD2-209ENST00000627185 PCDHGA4Q9Y5G9 962 aa11.11□□□□□ -0.63
CHD2-209ENST00000627185 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
CHD2-209ENST00000627185 EVC2Q86UK5 1308 aa11.1□□□□□ -0.63
CHD2-209ENST00000627185 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
CHD2-209ENST00000627185 QRICH2Q9H0J4 1663 aa11.1□□□□□ -0.63
CHD2-209ENST00000627185 DLC1Q96QB1 1528 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 ZMYM3Q14202 1370 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 ATAD2Q6PL18 1390 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 ZMYND10O75800 440 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 OSBPP22059 807 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 EXOC6Q8TAG9 804 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 KDM2BQ8NHM5 1336 aa11.09□□□□□ -0.63
CHD2-209ENST00000627185 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
CHD2-209ENST00000627185 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
CHD2-209ENST00000627185 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
CHD2-209ENST00000627185 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
CHD2-209ENST00000627185 GPIHBP1Q8IV16 184 aa11.08□□□□□ -0.64
CHD2-209ENST00000627185 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
CHD2-209ENST00000627185 ARHGEF28Q8N1W1 1705 aaKnown RBP11.08□□□□□ -0.64
CHD2-209ENST00000627185 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
CHD2-209ENST00000627185 CLTCQ00610 1675 aaKnown RBP11.08□□□□□ -0.64
CHD2-209ENST00000627185 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
CHD2-209ENST00000627185 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
CHD2-209ENST00000627185 DOK7Q18PE1 504 aa11.07□□□□□ -0.64
CHD2-209ENST00000627185 GGT6Q6P531 493 aa11.07□□□□□ -0.64
CHD2-209ENST00000627185 CENPQQ7L2Z9 268 aaPredicted RBP11.07□□□□□ -0.64
CHD2-209ENST00000627185 DDX12PQ92771 950 aa11.07□□□□□ -0.64
CHD2-209ENST00000627185 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
CHD2-209ENST00000627185 IDI1Q13907 227 aa11.06□□□□□ -0.64
CHD2-209ENST00000627185 SIRT1Q96EB6 747 aa11.06□□□□□ -0.64
CHD2-209ENST00000627185 PREX1Q8TCU6 1659 aa11.05□□□□□ -0.64
CHD2-209ENST00000627185 SPATA31D1Q6ZQQ2 1576 aa11.05□□□□□ -0.64
CHD2-209ENST00000627185 RUNDC1Q96C34 613 aa11.05□□□□□ -0.64
CHD2-209ENST00000627185 IPO9Q96P70 1041 aaKnown RBP11.05□□□□□ -0.64
CHD2-209ENST00000627185 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
CHD2-209ENST00000627185 PTPRMP28827 1452 aa11.05□□□□□ -0.64
CHD2-209ENST00000627185 SHPRHQ149N8 1683 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 DIP2BQ9P265 1576 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 YEATS2Q9ULM3 1422 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 BARGINQ6ZT62 677 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 ZSWIM6Q9HCJ5 1215 aa11.04□□□□□ -0.64
CHD2-209ENST00000627185 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
CHD2-209ENST00000627185 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
CHD2-209ENST00000627185 GPR37O15354 613 aa11.03□□□□□ -0.64
CHD2-209ENST00000627185 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
CHD2-209ENST00000627185 CNGB1Q14028 1251 aaPredicted RBP11.03□□□□□ -0.64
CHD2-209ENST00000627185 MORC1Q86VD1 984 aa11.03□□□□□ -0.64
CHD2-209ENST00000627185 WWC1Q8IX03 1113 aa11.03□□□□□ -0.64
CHD2-209ENST00000627185 TRAK1Q9UPV9 953 aa11.03□□□□□ -0.64
CHD2-209ENST00000627185 YTHDC2Q9H6S0 1430 aaKnown RBP11.02□□□□□ -0.64
CHD2-209ENST00000627185 NLRP1Q9C000 1473 aa11.02□□□□□ -0.65
CHD2-209ENST00000627185 APAF1O14727 1248 aa11.02□□□□□ -0.65
CHD2-209ENST00000627185 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
CHD2-209ENST00000627185 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.65
CHD2-209ENST00000627185 ARHGEF40Q8TER5 1519 aa11.02□□□□□ -0.65
CHD2-209ENST00000627185 PHF14O94880 888 aa11.01□□□□□ -0.65
CHD2-209ENST00000627185 PRIM1P49642 420 aaKnown RBP11.01□□□□□ -0.65
CHD2-209ENST00000627185 CRBNQ96SW2 442 aa11.01□□□□□ -0.65
CHD2-209ENST00000627185 EPAS1Q99814 870 aa11.01□□□□□ -0.65
CHD2-209ENST00000627185 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
CHD2-209ENST00000627185 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
CHD2-209ENST00000627185 IL16Q14005 1332 aa11.01□□□□□ -0.65
CHD2-209ENST00000627185 GPR153Q6NV75 609 aa11□□□□□ -0.65
CHD2-209ENST00000627185 TERF2IPQ9NYB0 399 aa11□□□□□ -0.65
CHD2-209ENST00000627185 TECPR2O15040 1411 aa11□□□□□ -0.65
CHD2-209ENST00000627185 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
CHD2-209ENST00000627185 ATP7BP35670 1465 aa11□□□□□ -0.65
CHD2-209ENST00000627185 ALKQ9UM73 1620 aa10.99□□□□□ -0.65
CHD2-209ENST00000627185 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
CHD2-209ENST00000627185 SLC24A3Q9HC58 644 aa10.99□□□□□ -0.65
CHD2-209ENST00000627185 A2ML1A8K2U0 1454 aa10.99□□□□□ -0.65
CHD2-209ENST00000627185 CD163L1Q9NR16 1453 aa10.99□□□□□ -0.65
CHD2-209ENST00000627185 NUTM2FA1L443 756 aa10.98□□□□□ -0.65
CHD2-209ENST00000627185 ARSIQ5FYB1 569 aa10.98□□□□□ -0.65
CHD2-209ENST00000627185 OTUD5Q96G74 571 aa10.98□□□□□ -0.65
CHD2-209ENST00000627185 PCDHGA10Q9Y5H3 936 aa10.98□□□□□ -0.65
CHD2-209ENST00000627185 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
CHD2-209ENST00000627185 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
CHD2-209ENST00000627185 TMEM132EQ6IEE7 984 aa10.97□□□□□ -0.65
CHD2-209ENST00000627185 ERICH6Q7L0X2 663 aa10.97□□□□□ -0.65
CHD2-209ENST00000627185 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.97□□□□□ -0.65
CHD2-209ENST00000627185 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
CHD2-209ENST00000627185 A0A1W2PP64 1363 aa10.97□□□□□ -0.65
CHD2-209ENST00000627185 SNPHO15079 494 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 NUDT7P0C024 238 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 MTHFSP49914 203 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
CHD2-209ENST00000627185 ZNF710Q8N1W2 664 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 TCP11L2Q8N4U5 519 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 KHSRPQ92945 711 aaKnown RBP eCLIP10.96□□□□□ -0.65
CHD2-209ENST00000627185 ZNF428Q96B54 188 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 MYH16Q9H6N6 1097 aa10.96□□□□□ -0.65
CHD2-209ENST00000627185 FOSBP53539 338 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms