RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 ITPKCQ96DU7 683 aa8.43□□□□□ -1.06
CDKL5-207ENST00000624700 ZFAND3Q9H8U3 227 aa8.43□□□□□ -1.06
CDKL5-207ENST00000624700 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
CDKL5-207ENST00000624700 NBPF14Q5TI25 921 aa8.42□□□□□ -1.06
CDKL5-207ENST00000624700 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
CDKL5-207ENST00000624700 A6NJR5 290 aa8.41□□□□□ -1.06
CDKL5-207ENST00000624700 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
CDKL5-207ENST00000624700 C1QTNF2Q9BXJ5 285 aa8.41□□□□□ -1.06
CDKL5-207ENST00000624700 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 MAN1A2O60476 641 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 USP17L8P0C7I0 530 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
CDKL5-207ENST00000624700 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 C6orf118Q5T5N4 469 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.06
CDKL5-207ENST00000624700 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
CDKL5-207ENST00000624700 UPP2O95045 317 aa8.39□□□□□ -1.07
CDKL5-207ENST00000624700 SH3BP5LQ7L8J4 393 aa8.39□□□□□ -1.07
CDKL5-207ENST00000624700 SNRKQ9NRH2 765 aa8.39□□□□□ -1.07
CDKL5-207ENST00000624700 MAP4K5Q9Y4K4 846 aa8.39□□□□□ -1.07
CDKL5-207ENST00000624700 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
CDKL5-207ENST00000624700 BMP2P12643 396 aa8.38□□□□□ -1.07
CDKL5-207ENST00000624700 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
CDKL5-207ENST00000624700 FSHRP23945 695 aa8.37□□□□□ -1.07
CDKL5-207ENST00000624700 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-207ENST00000624700 LINC00528Q8N1L1 170 aa8.37□□□□□ -1.07
CDKL5-207ENST00000624700 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
CDKL5-207ENST00000624700 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
CDKL5-207ENST00000624700 MAGEB6P1A0A0J9YX57 407 aa8.36□□□□□ -1.07
CDKL5-207ENST00000624700 MTMR14Q8NCE2 650 aa8.36□□□□□ -1.07
CDKL5-207ENST00000624700 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
CDKL5-207ENST00000624700 CCDC116Q8IYX3 515 aa8.34□□□□□ -1.07
CDKL5-207ENST00000624700 TSEN34Q9BSV6 310 aaKnown RBP8.34□□□□□ -1.07
CDKL5-207ENST00000624700 NDUFB9Q9Y6M9 179 aa8.34□□□□□ -1.07
CDKL5-207ENST00000624700 SOS2Q07890 1332 aaPredicted RBP8.33□□□□□ -1.08
CDKL5-207ENST00000624700 PPFIA3O75145 1194 aa8.33□□□□□ -1.08
CDKL5-207ENST00000624700 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
CDKL5-207ENST00000624700 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
CDKL5-207ENST00000624700 LRRN4Q8WUT4 740 aa8.32□□□□□ -1.08
CDKL5-207ENST00000624700 COG6Q9Y2V7 657 aa8.32□□□□□ -1.08
CDKL5-207ENST00000624700 WASHC4Q2M389 1173 aa8.31□□□□□ -1.08
CDKL5-207ENST00000624700 PDXDC2PQ6P474 469 aa8.31□□□□□ -1.08
CDKL5-207ENST00000624700 GJD4Q96KN9 370 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-207ENST00000624700 DNMT3LQ9UJW3 386 aa8.31□□□□□ -1.08
CDKL5-207ENST00000624700 TRAK2O60296 914 aa8.3□□□□□ -1.08
CDKL5-207ENST00000624700 PROSER2Q86WR7 435 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-207ENST00000624700 CLUAP1Q96AJ1 413 aa8.3□□□□□ -1.08
CDKL5-207ENST00000624700 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
CDKL5-207ENST00000624700 PGPEP1Q9NXJ5 209 aa8.3□□□□□ -1.08
CDKL5-207ENST00000624700 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
CDKL5-207ENST00000624700 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
CDKL5-207ENST00000624700 TTLL8A6PVC2 850 aa8.29□□□□□ -1.08
CDKL5-207ENST00000624700 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.08
CDKL5-207ENST00000624700 PPP1R26Q5T8A7 1209 aaPredicted RBP8.29□□□□□ -1.08
CDKL5-207ENST00000624700 GDPD2Q9HCC8 539 aa8.29□□□□□ -1.08
CDKL5-207ENST00000624700 CDV3Q9UKY7 258 aaKnown RBP8.29□□□□□ -1.08
CDKL5-207ENST00000624700 TRIM34Q9BYJ4 488 aa8.28□□□□□ -1.08
CDKL5-207ENST00000624700 NR6A1Q15406 480 aa8.27□□□□□ -1.09
CDKL5-207ENST00000624700 Q6ZVU0 165 aa8.27□□□□□ -1.09
CDKL5-207ENST00000624700 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-207ENST00000624700 SLC10A4Q96EP9 437 aa8.27□□□□□ -1.09
CDKL5-207ENST00000624700 KCTD15Q96SI1 283 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-207ENST00000624700 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-207ENST00000624700 ZNF330Q9Y3S2 320 aaPredicted RBP8.27□□□□□ -1.09
CDKL5-207ENST00000624700 ABL2P42684 1182 aa8.26□□□□□ -1.09
CDKL5-207ENST00000624700 DHX9Q08211 1270 aaKnown RBP8.26□□□□□ -1.09
CDKL5-207ENST00000624700 CBLBQ13191 982 aa8.26□□□□□ -1.09
CDKL5-207ENST00000624700 ZBTB33Q86T24 672 aa8.26□□□□□ -1.09
CDKL5-207ENST00000624700 ZNF592Q92610 1267 aa8.26□□□□□ -1.09
CDKL5-207ENST00000624700 POM121Q96HA1 1249 aa8.26□□□□□ -1.09
CDKL5-207ENST00000624700 TBC1D2BQ9UPU7 963 aa8.26□□□□□ -1.09
CDKL5-207ENST00000624700 SPINT1O43278 529 aa8.25□□□□□ -1.09
CDKL5-207ENST00000624700 PTSQ03393 145 aa8.25□□□□□ -1.09
CDKL5-207ENST00000624700 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
CDKL5-207ENST00000624700 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
CDKL5-207ENST00000624700 PTK2Q05397 1052 aa8.24□□□□□ -1.09
CDKL5-207ENST00000624700 SOX11P35716 441 aa8.23□□□□□ -1.09
CDKL5-207ENST00000624700 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-207ENST00000624700 SUPT5HO00267 1087 aaKnown RBP8.22□□□□□ -1.09
CDKL5-207ENST00000624700 INTS6LQ5JSJ4 861 aaKnown RBP8.22□□□□□ -1.09
CDKL5-207ENST00000624700 CCDC155Q8N6L0 562 aa8.21□□□□□ -1.1
CDKL5-207ENST00000624700 GPR161Q8N6U8 529 aaKnown RBP8.21□□□□□ -1.1
CDKL5-207ENST00000624700 EPS8L1Q8TE68 723 aa8.21□□□□□ -1.1
CDKL5-207ENST00000624700 NANOS1Q8WY41 292 aaKnown RBP8.21□□□□□ -1.1
CDKL5-207ENST00000624700 OCSTAMPQ9BR26 566 aa8.21□□□□□ -1.1
CDKL5-207ENST00000624700 ZBBXA8MT70 800 aa8.2□□□□□ -1.1
CDKL5-207ENST00000624700 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
CDKL5-207ENST00000624700 KRT76Q01546 638 aa8.2□□□□□ -1.1
CDKL5-207ENST00000624700 IRF5Q13568 498 aa8.2□□□□□ -1.1
CDKL5-207ENST00000624700 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
CDKL5-207ENST00000624700 AGBL1Q96MI9 1066 aa8.2□□□□□ -1.1
CDKL5-207ENST00000624700 RELBQ01201 579 aa8.19□□□□□ -1.1
CDKL5-207ENST00000624700 NR1H3Q13133 447 aa8.19□□□□□ -1.1
CDKL5-207ENST00000624700 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
CDKL5-207ENST00000624700 CNTNAP3BQ96NU0 1288 aa8.19□□□□□ -1.1
CDKL5-207ENST00000624700 CNTNAP3Q9BZ76 1288 aa8.19□□□□□ -1.1
CDKL5-207ENST00000624700 ZNF777Q9ULD5 760 aaPredicted RBP8.19□□□□□ -1.1
CDKL5-207ENST00000624700 SLC35F4A4IF30 521 aa8.18□□□□□ -1.1
CDKL5-207ENST00000624700 CTSOP43234 321 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms