RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
ERCC6-212ENST00000623788 MCCD1P59942 119 aaPredicted RBP8.31□□□□□ -1.08
ERCC6-212ENST00000623788 ZNF511Q8NB15 262 aa8.31□□□□□ -1.08
ERCC6-212ENST00000623788 ZNF592Q92610 1267 aa8.31□□□□□ -1.08
ERCC6-212ENST00000623788 WNT7AO00755 349 aa8.3□□□□□ -1.08
ERCC6-212ENST00000623788 UCN2Q96RP3 112 aa8.3□□□□□ -1.08
ERCC6-212ENST00000623788 C1QTNF2Q9BXJ5 285 aa8.3□□□□□ -1.08
ERCC6-212ENST00000623788 BAP1Q92560 729 aa8.29□□□□□ -1.08
ERCC6-212ENST00000623788 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
ERCC6-212ENST00000623788 BPHLQ86WA6 291 aaPredicted RBP8.28□□□□□ -1.08
ERCC6-212ENST00000623788 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
ERCC6-212ENST00000623788 ADAM32Q8TC27 787 aa8.28□□□□□ -1.08
ERCC6-212ENST00000623788 KIFC2Q96AC6 838 aa8.28□□□□□ -1.08
ERCC6-212ENST00000623788 ARHGAP9Q9BRR9 750 aa8.28□□□□□ -1.08
ERCC6-212ENST00000623788 ATP13A2Q9NQ11 1180 aa8.28□□□□□ -1.08
ERCC6-212ENST00000623788 FAM181BA6NEQ2 426 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 TERTO14746 1132 aaKnown RBP8.27□□□□□ -1.09
ERCC6-212ENST00000623788 WNT7BP56706 349 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 SH3BP2P78314 561 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 TRIM32Q13049 653 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 CFAP70Q5T0N1 1121 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 TRMT44Q8IYL2 757 aaKnown RBP8.27□□□□□ -1.09
ERCC6-212ENST00000623788 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 ARID3AQ99856 593 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
ERCC6-212ENST00000623788 SMPD1P17405 629 aa8.26□□□□□ -1.09
ERCC6-212ENST00000623788 TRIM47Q96LD4 638 aa8.26□□□□□ -1.09
ERCC6-212ENST00000623788 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
ERCC6-212ENST00000623788 ERFEQ4G0M1 354 aa8.25□□□□□ -1.09
ERCC6-212ENST00000623788 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
ERCC6-212ENST00000623788 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
ERCC6-212ENST00000623788 PALM3A6NDB9 673 aaPredicted RBP8.24□□□□□ -1.09
ERCC6-212ENST00000623788 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
ERCC6-212ENST00000623788 SRPK2P78362 688 aaKnown RBP8.24□□□□□ -1.09
ERCC6-212ENST00000623788 SKOR1P84550 965 aa8.24□□□□□ -1.09
ERCC6-212ENST00000623788 PHTF2Q8N3S3 785 aa8.24□□□□□ -1.09
ERCC6-212ENST00000623788 SLC16A10Q8TF71 515 aa8.24□□□□□ -1.09
ERCC6-212ENST00000623788 CEP126Q9P2H0 1117 aa8.24□□□□□ -1.09
ERCC6-212ENST00000623788 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
ERCC6-212ENST00000623788 ZBTB33Q86T24 672 aa8.23□□□□□ -1.09
ERCC6-212ENST00000623788 MRGPRX2Q96LB1 330 aa8.23□□□□□ -1.09
ERCC6-212ENST00000623788 ATP9BO43861 1147 aa8.22□□□□□ -1.09
ERCC6-212ENST00000623788 PCDHB9Q9Y5E1 797 aa8.22□□□□□ -1.09
ERCC6-212ENST00000623788 MAFBQ9Y5Q3 323 aaPredicted RBP8.22□□□□□ -1.09
ERCC6-212ENST00000623788 ESPNB1AK53 854 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 J3QL48 77 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 VARSP26640 1264 aaKnown RBP8.21□□□□□ -1.1
ERCC6-212ENST00000623788 TBC1D9Q6ZT07 1266 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 PLEKHM2Q8IWE5 1019 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 MPNDQ8N594 471 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 TFIP11Q9UBB9 837 aaKnown RBP8.21□□□□□ -1.1
ERCC6-212ENST00000623788 CDV3Q9UKY7 258 aaKnown RBP8.21□□□□□ -1.1
ERCC6-212ENST00000623788 MAP4K5Q9Y4K4 846 aa8.21□□□□□ -1.1
ERCC6-212ENST00000623788 MAGEB6P1A0A0J9YX57 407 aa8.2□□□□□ -1.1
ERCC6-212ENST00000623788 PIK3CDO00329 1044 aa8.2□□□□□ -1.1
ERCC6-212ENST00000623788 PBXIP1Q96AQ6 731 aa8.2□□□□□ -1.1
ERCC6-212ENST00000623788 CARD14Q9BXL6 1004 aa8.2□□□□□ -1.1
ERCC6-212ENST00000623788 DZIP3Q86Y13 1208 aaKnown RBP8.19□□□□□ -1.1
ERCC6-212ENST00000623788 SLC10A4Q96EP9 437 aa8.19□□□□□ -1.1
ERCC6-212ENST00000623788 LZTS3O60299 673 aaPredicted RBP8.18□□□□□ -1.1
ERCC6-212ENST00000623788 AGERQ15109 404 aa8.18□□□□□ -1.1
ERCC6-212ENST00000623788 RC3H1Q5TC82 1133 aaKnown RBP8.18□□□□□ -1.1
ERCC6-212ENST00000623788 CCDC125Q86Z20 511 aa8.18□□□□□ -1.1
ERCC6-212ENST00000623788 SEPT12Q8IYM1 358 aa8.18□□□□□ -1.1
ERCC6-212ENST00000623788 HPS1Q92902 700 aa8.18□□□□□ -1.1
ERCC6-212ENST00000623788 NBPF20Q3BBV1 942 aa8.17□□□□□ -1.1
ERCC6-212ENST00000623788 SLFNL1Q499Z3 407 aa8.17□□□□□ -1.1
ERCC6-212ENST00000623788 CDK15Q96Q40 435 aa8.17□□□□□ -1.1
ERCC6-212ENST00000623788 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 USP17L5A8MUK1 530 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 SIAH2O43255 324 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 LMOD1P29536 600 aaPredicted RBP8.16□□□□□ -1.1
ERCC6-212ENST00000623788 MAP7D1Q3KQU3 841 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 USP17L2Q6R6M4 530 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 RNF135Q8IUD6 432 aa8.16□□□□□ -1.1
ERCC6-212ENST00000623788 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
ERCC6-212ENST00000623788 KANK4Q5T7N3 995 aaPredicted RBP8.15□□□□□ -1.1
ERCC6-212ENST00000623788 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
ERCC6-212ENST00000623788 NPAS3Q8IXF0 933 aa8.15□□□□□ -1.1
ERCC6-212ENST00000623788 PLPP7Q8NBV4 271 aa8.15□□□□□ -1.1
ERCC6-212ENST00000623788 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.14□□□□□ -1.11
ERCC6-212ENST00000623788 GIGYF1O75420 1035 aaPredicted RBP8.14□□□□□ -1.11
ERCC6-212ENST00000623788 ATG7O95352 703 aa8.14□□□□□ -1.11
ERCC6-212ENST00000623788 ALDH1A1P00352 501 aa8.14□□□□□ -1.11
ERCC6-212ENST00000623788 SKIP12755 728 aa8.14□□□□□ -1.11
ERCC6-212ENST00000623788 EHBP1Q8NDI1 1231 aa8.14□□□□□ -1.11
ERCC6-212ENST00000623788 IRF7Q92985 503 aa8.14□□□□□ -1.11
ERCC6-212ENST00000623788 CCDC85AQ96PX6 553 aaPredicted RBP8.14□□□□□ -1.11
ERCC6-212ENST00000623788 ELOAQ14241 798 aaKnown RBP8.12□□□□□ -1.11
ERCC6-212ENST00000623788 ZSCAN1Q8NBB4 408 aa8.12□□□□□ -1.11
ERCC6-212ENST00000623788 KCTD15Q96SI1 283 aaPredicted RBP8.12□□□□□ -1.11
ERCC6-212ENST00000623788 RFX1P22670 979 aa8.11□□□□□ -1.11
ERCC6-212ENST00000623788 NCOA4Q13772 614 aa8.11□□□□□ -1.11
ERCC6-212ENST00000623788 INTS6LQ5JSJ4 861 aaKnown RBP8.11□□□□□ -1.11
ERCC6-212ENST00000623788 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
ERCC6-212ENST00000623788 WASF2Q9Y6W5 498 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms