RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
LINC01561-202ENST00000623529 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
LINC01561-202ENST00000623529 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
LINC01561-202ENST00000623529 USP19O94966 1318 aa13.38□□□□□ -0.27
LINC01561-202ENST00000623529 SHPRHQ149N8 1683 aa13.38□□□□□ -0.27
LINC01561-202ENST00000623529 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
LINC01561-202ENST00000623529 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01561-202ENST00000623529 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
LINC01561-202ENST00000623529 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
LINC01561-202ENST00000623529 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
LINC01561-202ENST00000623529 PEAK1Q9H792 1746 aa13.37□□□□□ -0.27
LINC01561-202ENST00000623529 AMPHP49418 695 aa13.37□□□□□ -0.27
LINC01561-202ENST00000623529 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
LINC01561-202ENST00000623529 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
LINC01561-202ENST00000623529 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
LINC01561-202ENST00000623529 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
LINC01561-202ENST00000623529 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
LINC01561-202ENST00000623529 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
LINC01561-202ENST00000623529 HOXC9P31274 260 aa13.36□□□□□ -0.27
LINC01561-202ENST00000623529 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
LINC01561-202ENST00000623529 JCADQ9P266 1359 aa13.36□□□□□ -0.27
LINC01561-202ENST00000623529 RXRBP28702 533 aa13.35□□□□□ -0.27
LINC01561-202ENST00000623529 AXIN2Q9Y2T1 843 aa13.35□□□□□ -0.27
LINC01561-202ENST00000623529 ROBO1Q9Y6N7 1651 aa13.35□□□□□ -0.27
LINC01561-202ENST00000623529 NFAT5O94916 1531 aa13.35□□□□□ -0.27
LINC01561-202ENST00000623529 ZBTB7CA1YPR0 619 aa13.35□□□□□ -0.27
LINC01561-202ENST00000623529 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
LINC01561-202ENST00000623529 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
LINC01561-202ENST00000623529 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
LINC01561-202ENST00000623529 APAF1O14727 1248 aa13.34□□□□□ -0.27
LINC01561-202ENST00000623529 HMOX1P09601 288 aa13.34□□□□□ -0.27
LINC01561-202ENST00000623529 IP6K1Q92551 441 aa13.34□□□□□ -0.27
LINC01561-202ENST00000623529 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
LINC01561-202ENST00000623529 SLIT3O75094 1523 aa13.34□□□□□ -0.27
LINC01561-202ENST00000623529 MEX3CQ5U5Q3 659 aaKnown RBP13.33□□□□□ -0.28
LINC01561-202ENST00000623529 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.28
LINC01561-202ENST00000623529 NHSL1Q5SYE7 1610 aa13.33□□□□□ -0.28
LINC01561-202ENST00000623529 FLT4P35916 1363 aa13.33□□□□□ -0.28
LINC01561-202ENST00000623529 LTV1Q96GA3 475 aaPredicted RBP13.32□□□□□ -0.28
LINC01561-202ENST00000623529 ARHGEF10O15013 1369 aa13.32□□□□□ -0.28
LINC01561-202ENST00000623529 SRCAPQ6ZRS2 3230 aa13.32□□□□□ -0.28
LINC01561-202ENST00000623529 AEBP1Q8IUX7 1158 aa13.32□□□□□ -0.28
LINC01561-202ENST00000623529 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
LINC01561-202ENST00000623529 EYA1Q99502 592 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 ZBED9Q6R2W3 1325 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
LINC01561-202ENST00000623529 FCHSD2O94868 740 aa13.3□□□□□ -0.28
LINC01561-202ENST00000623529 TCP11L2Q8N4U5 519 aa13.3□□□□□ -0.28
LINC01561-202ENST00000623529 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
LINC01561-202ENST00000623529 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
LINC01561-202ENST00000623529 KIF24Q5T7B8 1368 aa13.29□□□□□ -0.28
LINC01561-202ENST00000623529 PRKAR2BP31323 418 aa13.29□□□□□ -0.28
LINC01561-202ENST00000623529 NEUROD2Q15784 382 aa13.29□□□□□ -0.28
LINC01561-202ENST00000623529 ERICH6BQ5W0A0 696 aa13.29□□□□□ -0.28
LINC01561-202ENST00000623529 LTN1O94822 1766 aa13.29□□□□□ -0.28
LINC01561-202ENST00000623529 KIAA0232Q92628 1395 aa13.28□□□□□ -0.28
LINC01561-202ENST00000623529 SPATA31A6Q5VVP1 1343 aa13.28□□□□□ -0.28
LINC01561-202ENST00000623529 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
LINC01561-202ENST00000623529 NBPF6Q5VWK0 638 aa13.28□□□□□ -0.28
LINC01561-202ENST00000623529 NBPF4Q96M43 638 aa13.28□□□□□ -0.28
LINC01561-202ENST00000623529 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
LINC01561-202ENST00000623529 LRP6O75581 1613 aa13.27□□□□□ -0.28
LINC01561-202ENST00000623529 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.28
LINC01561-202ENST00000623529 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
LINC01561-202ENST00000623529 FAM83GA6ND36 823 aa13.27□□□□□ -0.29
LINC01561-202ENST00000623529 USHBP1Q8N6Y0 703 aa13.27□□□□□ -0.29
LINC01561-202ENST00000623529 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
LINC01561-202ENST00000623529 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
LINC01561-202ENST00000623529 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
LINC01561-202ENST00000623529 PHRF1Q9P1Y6 1649 aaKnown RBP13.26□□□□□ -0.29
LINC01561-202ENST00000623529 CPDO75976 1380 aa13.25□□□□□ -0.29
LINC01561-202ENST00000623529 ZNF521Q96K83 1311 aa13.25□□□□□ -0.29
LINC01561-202ENST00000623529 PHLPP1O60346 1717 aa13.25□□□□□ -0.29
LINC01561-202ENST00000623529 TMPOP42166 694 aaKnown RBP13.25□□□□□ -0.29
LINC01561-202ENST00000623529 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
LINC01561-202ENST00000623529 WWC1Q8IX03 1113 aa13.24□□□□□ -0.29
LINC01561-202ENST00000623529 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
LINC01561-202ENST00000623529 COL18A1P39060 1754 aa13.24□□□□□ -0.29
LINC01561-202ENST00000623529 RGPD5Q99666 1765 aa13.24□□□□□ -0.29
LINC01561-202ENST00000623529 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
LINC01561-202ENST00000623529 RGPD1P0DJD0 1748 aa13.24□□□□□ -0.29
LINC01561-202ENST00000623529 FKBP8Q14318 412 aa13.24□□□□□ -0.29
LINC01561-202ENST00000623529 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
LINC01561-202ENST00000623529 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
LINC01561-202ENST00000623529 ERBB3P21860 1342 aa13.23□□□□□ -0.29
LINC01561-202ENST00000623529 KDRP35968 1356 aa13.23□□□□□ -0.29
LINC01561-202ENST00000623529 RIPK4P57078 832 aa13.22□□□□□ -0.29
LINC01561-202ENST00000623529 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
LINC01561-202ENST00000623529 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
LINC01561-202ENST00000623529 NUTM2BA6NNL0 878 aaPredicted RBP13.21□□□□□ -0.29
LINC01561-202ENST00000623529 NUTM2EB1AL46 878 aaPredicted RBP13.21□□□□□ -0.29
LINC01561-202ENST00000623529 NUTM2AQ8IVF1 878 aaPredicted RBP13.21□□□□□ -0.29
LINC01561-202ENST00000623529 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.29
LINC01561-202ENST00000623529 RGPD2P0DJD1 1756 aa13.21□□□□□ -0.29
LINC01561-202ENST00000623529 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
LINC01561-202ENST00000623529 ABCA3Q99758 1704 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms