RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 POGZQ7Z3K3 1410 aa9.25□□□□□ -0.93
TRIM49B-202ENST00000622138 CAMSAP1Q5T5Y3 1602 aa9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 KLHL40Q2TBA0 621 aa9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 GOLGA6L22H0YM25 854 aa9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 RAB3GAP1Q15042 981 aa9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 ZNF771Q7L3S4 317 aaPredicted RBP9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 TNPO1Q92973 898 aaKnown RBP9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 FEZ1Q99689 392 aa9.24□□□□□ -0.93
TRIM49B-202ENST00000622138 NEXMIFQ5QGS0 1516 aa9.23□□□□□ -0.93
TRIM49B-202ENST00000622138 GGT6Q6P531 493 aa9.23□□□□□ -0.93
TRIM49B-202ENST00000622138 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
TRIM49B-202ENST00000622138 CHMP4AQ9BY43 222 aa9.23□□□□□ -0.93
TRIM49B-202ENST00000622138 KIAA2012Q0VF49 1180 aa9.23□□□□□ -0.93
TRIM49B-202ENST00000622138 PIK3C2BO00750 1634 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 ZBTB22O15209 634 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 WDR63Q8IWG1 891 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 SNX21Q969T3 373 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 CABP2Q9NPB3 220 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 PDZRN3Q9UPQ7 1066 aa9.22□□□□□ -0.93
TRIM49B-202ENST00000622138 ANKRD36BQ8N2N9 1353 aa9.21□□□□□ -0.93
TRIM49B-202ENST00000622138 COL3A1P02461 1466 aaPredicted RBP9.21□□□□□ -0.93
TRIM49B-202ENST00000622138 MLH3Q9UHC1 1453 aa9.21□□□□□ -0.93
TRIM49B-202ENST00000622138 CD109Q6YHK3 1445 aa9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 TULP2O00295 520 aa9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 CLGNO14967 610 aa9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 KCNJ4P48050 445 aa9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 FAM193AP78312 1265 aa9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 SAFB2Q14151 953 aaKnown RBP eCLIP9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 AXDND1Q5T1B0 1012 aaPredicted RBP9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 PDCL2Q8N4E4 241 aa9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 TSR2Q969E8 191 aaKnown RBP9.21□□□□□ -0.94
TRIM49B-202ENST00000622138 U2AF1L5P0DN76 240 aaPredicted RBP9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 U2AF1Q01081 240 aaKnown RBP eCLIP9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 CCDC27Q2M243 656 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 DHX37Q8IY37 1157 aaKnown RBP9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 OGFRQ9NZT2 677 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 CREBRFQ8IUR6 639 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 C22orf23Q9BZE7 217 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 GEMIN8Q9NWZ8 242 aaKnown RBP9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 CALCOCO1Q9P1Z2 691 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 A0A1W2PP64 1363 aa9.2□□□□□ -0.94
TRIM49B-202ENST00000622138 PMFBP1Q8TBY8 1022 aa9.19□□□□□ -0.94
TRIM49B-202ENST00000622138 CFAP53Q96M91 514 aa9.19□□□□□ -0.94
TRIM49B-202ENST00000622138 RPGRIP1LQ68CZ1 1315 aa9.19□□□□□ -0.94
TRIM49B-202ENST00000622138 EVC2Q86UK5 1308 aa9.19□□□□□ -0.94
TRIM49B-202ENST00000622138 NSD2O96028 1365 aa9.19□□□□□ -0.94
TRIM49B-202ENST00000622138 ANKRD7Q92527 254 aa9.19□□□□□ -0.94
TRIM49B-202ENST00000622138 CFAP74Q9C0B2 1584 aa9.18□□□□□ -0.94
TRIM49B-202ENST00000622138 MYO5BQ9ULV0 1848 aa9.18□□□□□ -0.94
TRIM49B-202ENST00000622138 MVPQ14764 893 aaKnown RBP9.18□□□□□ -0.94
TRIM49B-202ENST00000622138 BCL2L12Q9HB09 334 aa9.18□□□□□ -0.94
TRIM49B-202ENST00000622138 DIP2CQ9Y2E4 1556 aa9.18□□□□□ -0.94
TRIM49B-202ENST00000622138 ABCC11Q96J66 1382 aa9.18□□□□□ -0.94
TRIM49B-202ENST00000622138 ZNF622Q969S3 477 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 PLEKHF1Q96S99 279 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 GGNBP2Q9H3C7 697 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 CD163L1Q9NR16 1453 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 EXOSC9Q06265 439 aaKnown RBP9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 STK26Q9P289 416 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 TRIM35Q9UPQ4 493 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 DDX49Q9Y6V7 483 aaKnown RBP9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 PTPRMP28827 1452 aa9.17□□□□□ -0.94
TRIM49B-202ENST00000622138 YEATS2Q9ULM3 1422 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 RAPGEF3O95398 923 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 PIBF1Q8WXW3 757 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 ANKRD26Q9UPS8 1709 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 TRIM27P14373 513 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 PSEN1P49768 467 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 SYCP1Q15431 976 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 ZKSCAN2Q63HK3 967 aa9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 DZIP1LQ8IYY4 767 aaKnown RBP9.16□□□□□ -0.94
TRIM49B-202ENST00000622138 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 SLFN14P0C7P3 912 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 TMPOP42166 694 aaKnown RBP9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 ZSCAN23Q3MJ62 389 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 SSH1Q8WYL5 1049 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 PUS7Q96PZ0 661 aaKnown RBP9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 RBSNQ9H1K0 784 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 RWDD1Q9H446 243 aaPredicted RBP9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 SMC4Q9NTJ3 1288 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 HDAC5Q9UQL6 1122 aa9.15□□□□□ -0.94
TRIM49B-202ENST00000622138 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 IDI1Q13907 227 aa9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 SAMD1Q6SPF0 538 aaPredicted RBP9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 U2AF2P26368 475 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 CLTCQ00610 1675 aaKnown RBP9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
TRIM49B-202ENST00000622138 CAPN2P17655 700 aa9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
TRIM49B-202ENST00000622138 SRPK2P78362 688 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms