RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
C9orf72-206ENST00000619707 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 FANCAO15360 1455 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 ZBTB7BO15156 539 aaPredicted RBP10.73□□□□□ -0.69
C9orf72-206ENST00000619707 ZNF428Q96B54 188 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 MAP7D2Q96T17 732 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 GGNBP2Q9H3C7 697 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
C9orf72-206ENST00000619707 ARHGAP31Q2M1Z3 1444 aa10.72□□□□□ -0.69
C9orf72-206ENST00000619707 NOL7Q9UMY1 257 aaKnown RBP10.72□□□□□ -0.69
C9orf72-206ENST00000619707 CHD1O14646 1710 aa10.72□□□□□ -0.69
C9orf72-206ENST00000619707 FAM13BQ9NYF5 915 aa10.72□□□□□ -0.69
C9orf72-206ENST00000619707 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
C9orf72-206ENST00000619707 COL3A1P02461 1466 aaPredicted RBP10.71□□□□□ -0.69
C9orf72-206ENST00000619707 AK9Q5TCS8 1911 aa10.71□□□□□ -0.69
C9orf72-206ENST00000619707 REREQ9P2R6 1566 aa10.71□□□□□ -0.69
C9orf72-206ENST00000619707 TULP4Q9NRJ4 1543 aa10.71□□□□□ -0.69
C9orf72-206ENST00000619707 ZNF500O60304 480 aaPredicted RBP10.71□□□□□ -0.69
C9orf72-206ENST00000619707 DIAPH1O60610 1272 aaKnown RBP10.71□□□□□ -0.69
C9orf72-206ENST00000619707 LMBRD1Q9NUN5 540 aa10.71□□□□□ -0.69
C9orf72-206ENST00000619707 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.7
C9orf72-206ENST00000619707 RBSNQ9H1K0 784 aa10.71□□□□□ -0.7
C9orf72-206ENST00000619707 PPLO60437 1756 aa10.7□□□□□ -0.7
C9orf72-206ENST00000619707 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
C9orf72-206ENST00000619707 A0A1W2PP64 1363 aa10.7□□□□□ -0.7
C9orf72-206ENST00000619707 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
C9orf72-206ENST00000619707 ARHGAP45Q92619 1136 aa10.7□□□□□ -0.7
C9orf72-206ENST00000619707 PDLIM2Q96JY6 352 aa10.7□□□□□ -0.7
C9orf72-206ENST00000619707 XPCQ01831 940 aaPredicted RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
C9orf72-206ENST00000619707 CWC22Q9HCG8 908 aaKnown RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
C9orf72-206ENST00000619707 UQCRHP07919 91 aa10.69□□□□□ -0.7
C9orf72-206ENST00000619707 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 RPGRIP1LQ68CZ1 1315 aa10.69□□□□□ -0.7
C9orf72-206ENST00000619707 GLI2P10070 1586 aa10.69□□□□□ -0.7
C9orf72-206ENST00000619707 PRPF40AO75400 957 aaKnown RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 CYP2E1P05181 493 aaPredicted RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 SAFB2Q14151 953 aaKnown RBP eCLIP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 SIRT2Q8IXJ6 389 aa10.69□□□□□ -0.7
C9orf72-206ENST00000619707 MRPL50Q8N5N7 158 aaKnown RBP10.69□□□□□ -0.7
C9orf72-206ENST00000619707 PIK3R4Q99570 1358 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 PTCH1Q13635 1447 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 GSPT1P15170 499 aaKnown RBP10.68□□□□□ -0.7
C9orf72-206ENST00000619707 ZKSCAN5Q9Y2L8 839 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 UHRF1BP1LA0JNW5 1464 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 ST18O60284 1047 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 LMTK2Q8IWU2 1503 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 MCM5P33992 734 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 PKP1Q13835 747 aa10.68□□□□□ -0.7
C9orf72-206ENST00000619707 INTS3Q68E01 1043 aaKnown RBP10.68□□□□□ -0.7
C9orf72-206ENST00000619707 IGSF3O75054 1194 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 FCHSD2O94868 740 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 PLEKHM2Q8IWE5 1019 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 TERF2IPQ9NYB0 399 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 RBM27Q9P2N5 1060 aaKnown RBP10.67□□□□□ -0.7
C9orf72-206ENST00000619707 CCDC39Q9UFE4 941 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 ARHGEF28Q8N1W1 1705 aaKnown RBP10.67□□□□□ -0.7
C9orf72-206ENST00000619707 VAMP4O75379 141 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 CASC1Q6TDU7 716 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 MTERF4Q7Z6M4 381 aaKnown RBP10.67□□□□□ -0.7
C9orf72-206ENST00000619707 USP26Q9BXU7 913 aa10.67□□□□□ -0.7
C9orf72-206ENST00000619707 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
C9orf72-206ENST00000619707 FYB1O15117 783 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 PRKAR2BP31323 418 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 TTC22Q5TAA0 569 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 ABCC4O15439 1325 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 LRSAM1Q6UWE0 723 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 GPT2Q8TD30 523 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 DYNC1I1O14576 645 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 NUTM2DQ5VT03 806 aaPredicted RBP10.66□□□□□ -0.7
C9orf72-206ENST00000619707 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
C9orf72-206ENST00000619707 NAP1L2Q9ULW6 460 aaPredicted RBP10.66□□□□□ -0.7
C9orf72-206ENST00000619707 CFAP65Q6ZU64 1925 aaKnown RBP10.65□□□□□ -0.7
C9orf72-206ENST00000619707 ABCA9Q8IUA7 1624 aa10.65□□□□□ -0.7
C9orf72-206ENST00000619707 ELL2O00472 640 aaPredicted RBP10.65□□□□□ -0.7
C9orf72-206ENST00000619707 API5Q9BZZ5 524 aaKnown RBP10.65□□□□□ -0.7
C9orf72-206ENST00000619707 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
C9orf72-206ENST00000619707 SYCE3A1L190 88 aa10.65□□□□□ -0.7
C9orf72-206ENST00000619707 VGFO15240 615 aaPredicted RBP10.65□□□□□ -0.7
C9orf72-206ENST00000619707 GNAI1P63096 354 aa10.65□□□□□ -0.7
C9orf72-206ENST00000619707 ZGPATQ8N5A5 531 aaKnown RBP10.65□□□□□ -0.7
C9orf72-206ENST00000619707 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
C9orf72-206ENST00000619707 NPATQ14207 1427 aa10.65□□□□□ -0.71
C9orf72-206ENST00000619707 SASS6Q6UVJ0 657 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
C9orf72-206ENST00000619707 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 PNPLA6Q8IY17 1366 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 NFE2L2Q16236 605 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 TMEM63CQ9P1W3 806 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
C9orf72-206ENST00000619707 MBD3O95983 291 aa10.63□□□□□ -0.71
C9orf72-206ENST00000619707 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
C9orf72-206ENST00000619707 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
C9orf72-206ENST00000619707 STK26Q9P289 416 aa10.63□□□□□ -0.71
C9orf72-206ENST00000619707 FAM135BQ49AJ0 1406 aa10.63□□□□□ -0.71
C9orf72-206ENST00000619707 REC8O95072 547 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms