RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
CCDC144B-208ENST00000618081 NEBLO76041 1014 aa13.21□□□□□ -0.29
CCDC144B-208ENST00000618081 TANGO6Q9C0B7 1094 aa13.21□□□□□ -0.3
CCDC144B-208ENST00000618081 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.3
CCDC144B-208ENST00000618081 ANKRD50Q9ULJ7 1429 aa13.21□□□□□ -0.3
CCDC144B-208ENST00000618081 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 ERICH3Q5RHP9 1530 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 MTHFSP49914 203 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 MRE11P49959 708 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 NEK4P51957 841 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
CCDC144B-208ENST00000618081 CCDC192P0DO97 292 aa13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 WDHD1O75717 1129 aaPredicted RBP13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 LRRCC1Q9C099 1032 aa13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 HDGFL1Q5TGJ6 251 aa13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 ZNF76P36508 570 aa13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 CAVIN1Q6NZI2 390 aaKnown RBP13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 TSPYL1Q9H0U9 437 aa13.19□□□□□ -0.3
CCDC144B-208ENST00000618081 FANCIQ9NVI1 1328 aa13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 CBFA2T2O43439 604 aa13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 ME1P48163 572 aa13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 CEBPZQ03701 1054 aaKnown RBP13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 TNIP1Q15025 636 aa13.18□□□□□ -0.3
CCDC144B-208ENST00000618081 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 PPP1R12BO60237 982 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 TDO2P48775 406 aa13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 KIAA0754O94854 1291 aa13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 CCDC97Q96F63 343 aaPredicted RBP13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
CCDC144B-208ENST00000618081 WASF1Q92558 559 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 TMOD2Q9NZR1 351 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 NUP133Q8WUM0 1156 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 SEPT11Q9NVA2 429 aaKnown RBP13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 ZNF652Q9Y2D9 606 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 PDIA4P13667 645 aaKnown RBP13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 MYL6BP14649 208 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 LRRC9Q6ZRR7 1453 aa13.16□□□□□ -0.3
CCDC144B-208ENST00000618081 FIBPO43427 364 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 RNF214Q8ND24 703 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 ZNF397Q8NF99 534 aaPredicted RBP13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 CEP131Q9UPN4 1083 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 EIF3JO75822 258 aaKnown RBP13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 KRT85P78386 507 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 PPP4R3AQ6IN85 833 aa13.15□□□□□ -0.3
CCDC144B-208ENST00000618081 NUTM2BA6NNL0 878 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 NUTM2EB1AL46 878 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 NUTM2AQ8IVF1 878 aaPredicted RBP13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 IGHMBP2P38935 993 aaKnown RBP13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 SIL1Q9H173 461 aa13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 ERLIN1O75477 346 aa13.14□□□□□ -0.31
CCDC144B-208ENST00000618081 CETN2P41208 172 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 KRT32Q14532 448 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 TRAK2O60296 914 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 NOB1Q9ULX3 412 aaKnown RBP13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 STARD3NLO95772 234 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 NCOA2Q15596 1464 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 EFCAB5A4FU69 1503 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 INCENPQ9NQS7 918 aa13.13□□□□□ -0.31
CCDC144B-208ENST00000618081 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 TCP11L2Q8N4U5 519 aa13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 CCDC91Q7Z6B0 441 aa13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 STK3Q13188 491 aa13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 EPRSP07814 1512 aaKnown RBP13.12□□□□□ -0.31
CCDC144B-208ENST00000618081 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
CCDC144B-208ENST00000618081 SSBP05455 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms