RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 GNAT3A8MTJ3 354 aa22.22■■□□□ 1.15
AC008878.3-201ENST00000617428 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.22■■□□□ 1.15
AC008878.3-201ENST00000617428 ADGRL1O94910 1474 aa22.22■■□□□ 1.15
AC008878.3-201ENST00000617428 ATP2B2Q01814 1243 aa22.21■■□□□ 1.15
AC008878.3-201ENST00000617428 ZNF592Q92610 1267 aa22.21■■□□□ 1.15
AC008878.3-201ENST00000617428 STK11IPQ8N1F8 1099 aa22.21■■□□□ 1.15
AC008878.3-201ENST00000617428 CEP126Q9P2H0 1117 aa22.21■■□□□ 1.15
AC008878.3-201ENST00000617428 IQGAP2Q13576 1575 aa22.21■■□□□ 1.15
AC008878.3-201ENST00000617428 NME9Q86XW9 330 aa22.21■■□□□ 1.15
AC008878.3-201ENST00000617428 MCM10Q7L590 875 aa22.2■■□□□ 1.15
AC008878.3-201ENST00000617428 PHF8Q9UPP1 1060 aa22.2■■□□□ 1.15
AC008878.3-201ENST00000617428 FKBP4Q02790 459 aaKnown RBP eCLIP22.2■■□□□ 1.14
AC008878.3-201ENST00000617428 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
AC008878.3-201ENST00000617428 SUPT6HQ7KZ85 1726 aaKnown RBP22.19■■□□□ 1.14
AC008878.3-201ENST00000617428 MAP4K4O95819 1239 aaPredicted RBP22.19■■□□□ 1.14
AC008878.3-201ENST00000617428 MVPQ14764 893 aaKnown RBP22.19■■□□□ 1.14
AC008878.3-201ENST00000617428 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 FANCIQ9NVI1 1328 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 IL1RAPL2Q9NP60 686 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 AACSQ86V21 672 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 NACAP1Q9BZK3 213 aa22.18■■□□□ 1.14
AC008878.3-201ENST00000617428 STARD3NLO95772 234 aa22.17■■□□□ 1.14
AC008878.3-201ENST00000617428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.143e-6■■■□□ 18.6
AC008878.3-201ENST00000617428 HOMER1Q86YM7 354 aa22.16■■□□□ 1.14
AC008878.3-201ENST00000617428 CCAR1Q8IX12 1150 aaKnown RBP22.16■■□□□ 1.14
AC008878.3-201ENST00000617428 PDCP20941 246 aa22.16■■□□□ 1.14
AC008878.3-201ENST00000617428 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
AC008878.3-201ENST00000617428 AKNAQ7Z591 1439 aa22.15■■□□□ 1.14
AC008878.3-201ENST00000617428 R3HCC1Q9Y3T6 440 aaKnown RBP22.15■■□□□ 1.14
AC008878.3-201ENST00000617428 DUSP27Q5VZP5 1158 aa22.15■■□□□ 1.14
AC008878.3-201ENST00000617428 RBM5P52756 815 aaKnown RBP eCLIP22.15■■□□□ 1.14
AC008878.3-201ENST00000617428 RABEP1Q15276 862 aa22.14■■□□□ 1.14
AC008878.3-201ENST00000617428 CNKSR2Q8WXI2 1034 aa22.14■■□□□ 1.14
AC008878.3-201ENST00000617428 EMILIN1Q9Y6C2 1016 aa22.14■■□□□ 1.14
AC008878.3-201ENST00000617428 MCM2P49736 904 aa22.14■■□□□ 1.13
AC008878.3-201ENST00000617428 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
AC008878.3-201ENST00000617428 LAMC3Q9Y6N6 1575 aa22.13■■□□□ 1.13
AC008878.3-201ENST00000617428 ABCC5O15440 1437 aa22.13■■□□□ 1.13
AC008878.3-201ENST00000617428 TMOD3Q9NYL9 352 aa22.13■■□□□ 1.13
AC008878.3-201ENST00000617428 CCDC70Q6NSX1 233 aa22.13■■□□□ 1.13
AC008878.3-201ENST00000617428 CAMSAP2Q08AD1 1489 aa22.12■■□□□ 1.13
AC008878.3-201ENST00000617428 CYP46A1Q9Y6A2 500 aa22.12■■□□□ 1.13
AC008878.3-201ENST00000617428 STK3Q13188 491 aa22.11■■□□□ 1.13
AC008878.3-201ENST00000617428 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
AC008878.3-201ENST00000617428 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
AC008878.3-201ENST00000617428 CEBPZQ03701 1054 aaKnown RBP22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 CHD1LQ86WJ1 897 aa22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 SPINK5Q9NQ38 1064 aaPredicted RBP22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 IGHMBP2P38935 993 aaKnown RBP22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 RPAP2Q8IXW5 612 aaPredicted RBP22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 RNF214Q8ND24 703 aa22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 RAI14Q9P0K7 980 aa22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
AC008878.3-201ENST00000617428 OFD1O75665 1012 aa22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 TMEM57Q8N5G2 664 aa22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 NGLY1Q96IV0 654 aa22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 FIBPO43427 364 aa22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 ZSCAN25Q6NSZ9 544 aa22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 KINO60870 393 aaKnown RBP22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 ZSCAN29Q8IWY8 852 aaPredicted RBP22.09■■□□□ 1.13
AC008878.3-201ENST00000617428 LRP2BPQ9P2M1 347 aa22.08■■□□□ 1.13
AC008878.3-201ENST00000617428 NAP1L1P55209 391 aaKnown RBP22.08■■□□□ 1.13
AC008878.3-201ENST00000617428 SLFN5Q08AF3 891 aa22.08■■□□□ 1.13
AC008878.3-201ENST00000617428 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
AC008878.3-201ENST00000617428 IDH1O75874 414 aaKnown RBP22.08■■□□□ 1.12
AC008878.3-201ENST00000617428 STK38Q15208 465 aa22.08■■□□□ 1.12
AC008878.3-201ENST00000617428 AMOTQ4VCS5 1084 aa22.08■■□□□ 1.12
AC008878.3-201ENST00000617428 NUP133Q8WUM0 1156 aa22.08■■□□□ 1.12
AC008878.3-201ENST00000617428 ABCF2Q9UG63 623 aa22.08■■□□□ 1.12
AC008878.3-201ENST00000617428 NFKBIBQ15653 356 aa22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 TRIM22Q8IYM9 498 aa22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 NAT10Q9H0A0 1025 aaKnown RBP22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 CT47A1Q5JQC4 288 aaPredicted RBP22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 CDK5RAP3Q96JB5 506 aa22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 FMNL2Q96PY5 1086 aa22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 EPS15P42566 896 aa22.07■■□□□ 1.12
AC008878.3-201ENST00000617428 CWC27Q6UX04 472 aaKnown RBP22.06■■□□□ 1.12
AC008878.3-201ENST00000617428 TDO2P48775 406 aa22.06■■□□□ 1.12
AC008878.3-201ENST00000617428 C11orf95C9JLR9 678 aaPredicted RBP22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 DENND4BO75064 1496 aaPredicted RBP22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 LARP1Q6PKG0 1096 aaKnown RBP22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 TXLNAP40222 546 aa22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 METTL24Q5JXM2 366 aa22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 PPP6R1Q9UPN7 881 aa22.05■■□□□ 1.12
AC008878.3-201ENST00000617428 NCOA1Q15788 1441 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 PRPF40AO75400 957 aaKnown RBP22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 BLOC1S2Q6QNY1 142 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 KRT28Q7Z3Y7 464 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 CCDC69A6NI79 296 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 ZPR1O75312 459 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 NUTM1Q86Y26 1132 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
AC008878.3-201ENST00000617428 CAVIN1Q6NZI2 390 aaKnown RBP22.03■■□□□ 1.12
AC008878.3-201ENST00000617428 PDILTQ8N807 584 aa22.03■■□□□ 1.12
AC008878.3-201ENST00000617428 SSH1Q8WYL5 1049 aa22.03■■□□□ 1.12
AC008878.3-201ENST00000617428 ANKRD1Q15327 319 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms