RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 ZC3H13Q5T200 1668 aaKnown RBP10.82□□□□□ -0.68
MALAT1-208ENST00000616527 SEMA3EO15041 775 aa10.82□□□□□ -0.68
MALAT1-208ENST00000616527 FAM98CQ17RN3 349 aaKnown RBP10.82□□□□□ -0.68
MALAT1-208ENST00000616527 PRKRIP1Q9H875 184 aaPredicted RBP10.82□□□□□ -0.68
MALAT1-208ENST00000616527 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
MALAT1-208ENST00000616527 RBM27Q9P2N5 1060 aaKnown RBP10.82□□□□□ -0.68
MALAT1-208ENST00000616527 YEATS2Q9ULM3 1422 aa10.82□□□□□ -0.68
MALAT1-208ENST00000616527 KIAA1210Q9ULL0 1709 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 MADDQ8WXG6 1647 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 ADGRB3O60242 1522 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 NBPF1Q3BBV0 1214 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 TESK2Q96S53 571 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 SLC52A1Q9NWF4 448 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 FAM198AQ9UFP1 575 aa10.81□□□□□ -0.68
MALAT1-208ENST00000616527 GGT6Q6P531 493 aa10.8□□□□□ -0.68
MALAT1-208ENST00000616527 SCAF11Q99590 1463 aaKnown RBP10.8□□□□□ -0.68
MALAT1-208ENST00000616527 ZFYVE9O95405 1425 aa10.79□□□□□ -0.68
MALAT1-208ENST00000616527 SOWAHBA6NEL2 793 aa10.79□□□□□ -0.68
MALAT1-208ENST00000616527 YTHDC1Q96MU7 727 aaKnown RBP10.79□□□□□ -0.68
MALAT1-208ENST00000616527 COL17A1Q9UMD9 1497 aaPredicted RBP10.79□□□□□ -0.68
MALAT1-208ENST00000616527 CDCA8Q53HL2 280 aa10.78□□□□□ -0.68
MALAT1-208ENST00000616527 PLA2G2EQ9NZK7 142 aa10.78□□□□□ -0.68
MALAT1-208ENST00000616527 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.68
MALAT1-208ENST00000616527 CAMSAP1Q5T5Y3 1602 aa10.77□□□□□ -0.68
MALAT1-208ENST00000616527 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
MALAT1-208ENST00000616527 TMF1P82094 1093 aa10.77□□□□□ -0.69
MALAT1-208ENST00000616527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.77□□□□□ -0.69
MALAT1-208ENST00000616527 TTC13Q8NBP0 860 aa10.77□□□□□ -0.69
MALAT1-208ENST00000616527 TATDN2Q93075 761 aa10.77□□□□□ -0.69
MALAT1-208ENST00000616527 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.69
MALAT1-208ENST00000616527 PIK3C2BO00750 1634 aa10.76□□□□□ -0.69
MALAT1-208ENST00000616527 BCAMP50895 628 aa10.76□□□□□ -0.69
MALAT1-208ENST00000616527 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
MALAT1-208ENST00000616527 SETBP1Q9Y6X0 1596 aa10.76□□□□□ -0.69
MALAT1-208ENST00000616527 KIF1BO60333 1816 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
MALAT1-208ENST00000616527 C3orf80F5H4A9 247 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 SMAPO00193 183 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 RALBP1Q15311 655 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 PADI6Q6TGC4 694 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 C14orf93Q9H972 538 aaKnown RBP10.75□□□□□ -0.69
MALAT1-208ENST00000616527 PNMA3Q9UL41 463 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
MALAT1-208ENST00000616527 IQGAP1P46940 1657 aa10.74□□□□□ -0.69
MALAT1-208ENST00000616527 PTGDRQ13258 359 aa10.74□□□□□ -0.69
MALAT1-208ENST00000616527 IFT172Q9UG01 1749 aa10.74□□□□□ -0.69
MALAT1-208ENST00000616527 UGGT1Q9NYU2 1555 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 PER1O15534 1290 aaPredicted RBP10.73□□□□□ -0.69
MALAT1-208ENST00000616527 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 NUDT18Q6ZVK8 323 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 PUS7Q96PZ0 661 aaKnown RBP10.73□□□□□ -0.69
MALAT1-208ENST00000616527 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.73□□□□□ -0.69
MALAT1-208ENST00000616527 ADGRF5Q8IZF2 1346 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 ARHGEF40Q8TER5 1519 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 SYNMO15061 1565 aa10.73□□□□□ -0.69
MALAT1-208ENST00000616527 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
MALAT1-208ENST00000616527 ERVK-7P63135 1459 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 IDI1Q13907 227 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 KIF13AQ9H1H9 1805 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 DISP3Q9P2K9 1392 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 NPC1L1Q9UHC9 1359 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 GTF3C3Q9Y5Q9 886 aa10.71□□□□□ -0.69
MALAT1-208ENST00000616527 BRD4O60885 1362 aaPredicted RBP10.7□□□□□ -0.7
MALAT1-208ENST00000616527 INSRP06213 1382 aa10.7□□□□□ -0.7
MALAT1-208ENST00000616527 CFAP70Q5T0N1 1121 aa10.7□□□□□ -0.7
MALAT1-208ENST00000616527 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
MALAT1-208ENST00000616527 PARD3Q8TEW0 1356 aa10.69□□□□□ -0.7
MALAT1-208ENST00000616527 WBP1LQ9NX94 342 aa10.69□□□□□ -0.7
MALAT1-208ENST00000616527 SIGLEC1Q9BZZ2 1709 aa10.69□□□□□ -0.7
MALAT1-208ENST00000616527 MYO3AQ8NEV4 1616 aa10.69□□□□□ -0.7
MALAT1-208ENST00000616527 ADGRB1O14514 1584 aa10.69□□□□□ -0.7
MALAT1-208ENST00000616527 SPATA31D1Q6ZQQ2 1576 aa10.69□□□□□ -0.7
MALAT1-208ENST00000616527 NEXMIFQ5QGS0 1516 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 PPLO60437 1756 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 MYBBP1AQ9BQG0 1328 aaKnown RBP10.68□□□□□ -0.7
MALAT1-208ENST00000616527 FCHSD2O94868 740 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 SAMD7Q7Z3H4 446 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 MRS2Q9HD23 443 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 HPS5Q9UPZ3 1129 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 MROH2AA6NES4 1674 aa10.68□□□□□ -0.7
MALAT1-208ENST00000616527 HDGFP51858 240 aaKnown RBP10.67□□□□□ -0.7
MALAT1-208ENST00000616527 PREX1Q8TCU6 1659 aa10.66□□□□□ -0.7
MALAT1-208ENST00000616527 RBM26Q5T8P6 1007 aaKnown RBP10.66□□□□□ -0.7
MALAT1-208ENST00000616527 IFFO2Q5TF58 517 aa10.66□□□□□ -0.7
MALAT1-208ENST00000616527 EYA1Q99502 592 aa10.66□□□□□ -0.7
MALAT1-208ENST00000616527 TMEM131LA2VDJ0 1609 aa10.66□□□□□ -0.7
MALAT1-208ENST00000616527 PPP4CP60510 307 aa10.65□□□□□ -0.7
MALAT1-208ENST00000616527 NLRP13Q86W25 1043 aa10.65□□□□□ -0.7
MALAT1-208ENST00000616527 PANK3Q9H999 370 aa10.65□□□□□ -0.7
MALAT1-208ENST00000616527 TSPOAP1O95153 1857 aa10.65□□□□□ -0.7
MALAT1-208ENST00000616527 ZBED9Q6R2W3 1325 aa10.64□□□□□ -0.71
MALAT1-208ENST00000616527 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
MALAT1-208ENST00000616527 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
MALAT1-208ENST00000616527 PNISRQ8TF01 805 aaKnown RBP10.64□□□□□ -0.71
MALAT1-208ENST00000616527 POLR3GLQ9BT43 218 aa10.64□□□□□ -0.71
MALAT1-208ENST00000616527 LRPPRCP42704 1394 aaKnown RBP10.64□□□□□ -0.71
MALAT1-208ENST00000616527 ZMYM3Q14202 1370 aa10.63□□□□□ -0.71
MALAT1-208ENST00000616527 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms