RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 NUCB1Q02818 461 aa16.46■□□□□ 0.23
PCDHA11-202ENST00000616325 CDK19Q9BWU1 502 aa16.46■□□□□ 0.23
PCDHA11-202ENST00000616325 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.22
PCDHA11-202ENST00000616325 PLEKHF1Q96S99 279 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 ZKSCAN5Q9Y2L8 839 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 SLC4A10Q6U841 1118 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 ATP7AQ04656 1500 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 ZFYVE16Q7Z3T8 1539 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 CEP152O94986 1710 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
PCDHA11-202ENST00000616325 C17orf53Q8N3J3 647 aaPredicted RBP16.44■□□□□ 0.22
PCDHA11-202ENST00000616325 DYNC1I1O14576 645 aa16.44■□□□□ 0.22
PCDHA11-202ENST00000616325 DDIT3P35638 169 aa16.44■□□□□ 0.22
PCDHA11-202ENST00000616325 OTUD7AQ8TE49 926 aaPredicted RBP16.44■□□□□ 0.22
PCDHA11-202ENST00000616325 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
PCDHA11-202ENST00000616325 SASS6Q6UVJ0 657 aa16.43■□□□□ 0.22
PCDHA11-202ENST00000616325 SMAP1Q8IYB5 467 aaPredicted RBP16.43■□□□□ 0.22
PCDHA11-202ENST00000616325 TWISTNBQ3B726 338 aaPredicted RBP16.43■□□□□ 0.22
PCDHA11-202ENST00000616325 TSHZ3Q63HK5 1081 aa16.43■□□□□ 0.22
PCDHA11-202ENST00000616325 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
PCDHA11-202ENST00000616325 ZGPATQ8N5A5 531 aaKnown RBP16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 KIF2CQ99661 725 aa16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 ZCCHC11Q5TAX3 1644 aaKnown RBP16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 MAP3K4Q9Y6R4 1608 aa16.42■□□□□ 0.22
PCDHA11-202ENST00000616325 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 CCDC39Q9UFE4 941 aa16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 NME9Q86XW9 330 aa16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 NPATQ14207 1427 aa16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 AK9Q5TCS8 1911 aa16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
PCDHA11-202ENST00000616325 RTEL1-TNFRSF6BF6WH68 1400 aa16.4■□□□□ 0.22
PCDHA11-202ENST00000616325 LMBRD1Q9NUN5 540 aa16.4■□□□□ 0.22
PCDHA11-202ENST00000616325 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
PCDHA11-202ENST00000616325 MTERF4Q7Z6M4 381 aaKnown RBP16.4■□□□□ 0.22
PCDHA11-202ENST00000616325 NUCB2P80303 420 aa16.39■□□□□ 0.22
PCDHA11-202ENST00000616325 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.22
PCDHA11-202ENST00000616325 NSFL1CQ9UNZ2 370 aaKnown RBP16.39■□□□□ 0.22
PCDHA11-202ENST00000616325 ZBTB7BO15156 539 aaPredicted RBP16.39■□□□□ 0.21
PCDHA11-202ENST00000616325 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
PCDHA11-202ENST00000616325 CCDC94Q9BW85 323 aaPredicted RBP16.39■□□□□ 0.21
PCDHA11-202ENST00000616325 SIRT2Q8IXJ6 389 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 VAMP4O75379 141 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 BMP2KLQ5H9B9 411 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 GPT2Q8TD30 523 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 TERF1P54274 439 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 ZNF445P59923 1031 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 FGD1P98174 961 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 GDPD2Q9HCC8 539 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 TMEM63CQ9P1W3 806 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 IQSEC2Q5JU85 1478 aa16.38■□□□□ 0.21
PCDHA11-202ENST00000616325 DTNBO60941 627 aa16.37■□□□□ 0.21
PCDHA11-202ENST00000616325 MCM10Q7L590 875 aa16.37■□□□□ 0.21
PCDHA11-202ENST00000616325 CDC45O75419 566 aa16.36■□□□□ 0.21
PCDHA11-202ENST00000616325 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
PCDHA11-202ENST00000616325 TTC12Q9H892 705 aaPredicted RBP16.36■□□□□ 0.21
PCDHA11-202ENST00000616325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
PCDHA11-202ENST00000616325 FCHSD2O94868 740 aa16.35■□□□□ 0.21
PCDHA11-202ENST00000616325 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
PCDHA11-202ENST00000616325 MRPL50Q8N5N7 158 aaKnown RBP16.35■□□□□ 0.21
PCDHA11-202ENST00000616325 TET3O43151 1660 aa16.35■□□□□ 0.21
PCDHA11-202ENST00000616325 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
PCDHA11-202ENST00000616325 AEBP1Q8IUX7 1158 aa16.35■□□□□ 0.21
PCDHA11-202ENST00000616325 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 PPIP5K1Q6PFW1 1433 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 ABCC11Q96J66 1382 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 HS1BP3Q53T59 392 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 MYOM2P54296 1465 aa16.34■□□□□ 0.21
PCDHA11-202ENST00000616325 F6X3S4 739 aa16.33■□□□□ 0.21
PCDHA11-202ENST00000616325 GNAI1P63096 354 aa16.33■□□□□ 0.21
PCDHA11-202ENST00000616325 ASXL2Q76L83 1435 aa16.33■□□□□ 0.21
PCDHA11-202ENST00000616325 KIF1BO60333 1816 aa16.33■□□□□ 0.21
PCDHA11-202ENST00000616325 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.2
PCDHA11-202ENST00000616325 MROH2AA6NES4 1674 aa16.33■□□□□ 0.2
PCDHA11-202ENST00000616325 ZSCAN20P17040 1043 aaPredicted RBP16.33■□□□□ 0.2
PCDHA11-202ENST00000616325 DMTNQ08495 405 aa16.33■□□□□ 0.2
PCDHA11-202ENST00000616325 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
PCDHA11-202ENST00000616325 ZNF428Q96B54 188 aa16.32■□□□□ 0.2
PCDHA11-202ENST00000616325 SHPRHQ149N8 1683 aa16.32■□□□□ 0.2
PCDHA11-202ENST00000616325 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
PCDHA11-202ENST00000616325 ST18O60284 1047 aa16.32■□□□□ 0.2
PCDHA11-202ENST00000616325 ZNF771Q7L3S4 317 aaPredicted RBP16.32■□□□□ 0.2
PCDHA11-202ENST00000616325 RILPL2Q969X0 211 aa16.32■□□□□ 0.2
PCDHA11-202ENST00000616325 RABEP1Q15276 862 aa16.31■□□□□ 0.2
PCDHA11-202ENST00000616325 ALDH1L2Q3SY69 923 aa16.31■□□□□ 0.2
PCDHA11-202ENST00000616325 PDLIM2Q96JY6 352 aa16.31■□□□□ 0.2
PCDHA11-202ENST00000616325 TRIM6-TRIM34B2RNG4 842 aa16.31■□□□□ 0.2
PCDHA11-202ENST00000616325 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
PCDHA11-202ENST00000616325 NCOA3Q9Y6Q9 1424 aa16.31■□□□□ 0.2
PCDHA11-202ENST00000616325 VGLL3A8MV65 326 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms