RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 C1QTNF2Q9BXJ5 285 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 FAM217BQ9NTX9 383 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
HMGB1P24-202ENST00000615653 SPDYE5A6NIY4 337 aa7.05□□□□□ -1.28
HMGB1P24-202ENST00000615653 BCRP11274 1271 aa7.05□□□□□ -1.28
HMGB1P24-202ENST00000615653 MAP2K5Q13163 448 aa7.05□□□□□ -1.28
HMGB1P24-202ENST00000615653 CCDC116Q8IYX3 515 aa7.05□□□□□ -1.28
HMGB1P24-202ENST00000615653 AGERQ15109 404 aa7.04□□□□□ -1.28
HMGB1P24-202ENST00000615653 F12P00748 615 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P24-202ENST00000615653 GPIHBP1Q8IV16 184 aa7.03□□□□□ -1.28
HMGB1P24-202ENST00000615653 GPCPD1Q9NPB8 672 aa7.03□□□□□ -1.28
HMGB1P24-202ENST00000615653 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
HMGB1P24-202ENST00000615653 MBIPQ9NS73 344 aa7.03□□□□□ -1.28
HMGB1P24-202ENST00000615653 CBLBQ13191 982 aa7.02□□□□□ -1.29
HMGB1P24-202ENST00000615653 MTMR2Q13614 643 aa7.02□□□□□ -1.29
HMGB1P24-202ENST00000615653 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P24-202ENST00000615653 ALYREFQ86V81 257 aaKnown RBP7.02□□□□□ -1.29
HMGB1P24-202ENST00000615653 TRMT44Q8IYL2 757 aaKnown RBP7.02□□□□□ -1.29
HMGB1P24-202ENST00000615653 LRRC4BQ9NT99 713 aa7.02□□□□□ -1.29
HMGB1P24-202ENST00000615653 IGF1RP08069 1367 aa7.01□□□□□ -1.29
HMGB1P24-202ENST00000615653 IRF6O14896 467 aa7.01□□□□□ -1.29
HMGB1P24-202ENST00000615653 CTSOP43234 321 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P24-202ENST00000615653 CUEDC1Q9NWM3 386 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P24-202ENST00000615653 MAP10Q9P2G4 905 aa7.01□□□□□ -1.29
HMGB1P24-202ENST00000615653 NDUFV2P19404 249 aa7□□□□□ -1.29
HMGB1P24-202ENST00000615653 ITGB7P26010 798 aa7□□□□□ -1.29
HMGB1P24-202ENST00000615653 CLCN1P35523 988 aa7□□□□□ -1.29
HMGB1P24-202ENST00000615653 ACDQ96AP0 544 aa7□□□□□ -1.29
HMGB1P24-202ENST00000615653 PPP1R26Q5T8A7 1209 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P24-202ENST00000615653 RNF217Q8TC41 542 aa6.99□□□□□ -1.29
HMGB1P24-202ENST00000615653 SPIRE2Q8WWL2 714 aa6.99□□□□□ -1.29
HMGB1P24-202ENST00000615653 PGPEP1Q9NXJ5 209 aa6.99□□□□□ -1.29
HMGB1P24-202ENST00000615653 MOXD2PA6NHM9 499 aa6.98□□□□□ -1.29
HMGB1P24-202ENST00000615653 INSM2Q96T92 566 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P24-202ENST00000615653 COL8A1P27658 744 aa6.96□□□□□ -1.3
HMGB1P24-202ENST00000615653 KRTAP19-1Q8IUB9 90 aa6.96□□□□□ -1.3
HMGB1P24-202ENST00000615653 GMCL1Q96IK5 515 aa6.96□□□□□ -1.3
HMGB1P24-202ENST00000615653 MINK1Q8N4C8 1332 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P24-202ENST00000615653 SNRPNP63162 240 aaKnown RBP6.95□□□□□ -1.3
HMGB1P24-202ENST00000615653 ZMYM1Q5SVZ6 1142 aa6.95□□□□□ -1.3
HMGB1P24-202ENST00000615653 POLMQ9NP87 494 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P24-202ENST00000615653 OIP5O43482 229 aa6.94□□□□□ -1.3
HMGB1P24-202ENST00000615653 PLCB2Q00722 1185 aa6.94□□□□□ -1.3
HMGB1P24-202ENST00000615653 ZNF837Q96EG3 531 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P24-202ENST00000615653 AGBL1Q96MI9 1066 aa6.94□□□□□ -1.3
HMGB1P24-202ENST00000615653 CFAP99D6REC4 459 aa6.93□□□□□ -1.3
HMGB1P24-202ENST00000615653 RELBQ01201 579 aa6.93□□□□□ -1.3
HMGB1P24-202ENST00000615653 SH3BP5LQ7L8J4 393 aa6.93□□□□□ -1.3
HMGB1P24-202ENST00000615653 TRIM22Q8IYM9 498 aa6.93□□□□□ -1.3
HMGB1P24-202ENST00000615653 ARMC2Q8NEN0 867 aa6.93□□□□□ -1.3
HMGB1P24-202ENST00000615653 MKL2Q9ULH7 1088 aa6.93□□□□□ -1.3
HMGB1P24-202ENST00000615653 GPR25O00155 361 aa6.92□□□□□ -1.3
HMGB1P24-202ENST00000615653 FOXR1Q6PIV2 292 aa6.92□□□□□ -1.3
HMGB1P24-202ENST00000615653 GJA5P36382 358 aa6.91□□□□□ -1.3
HMGB1P24-202ENST00000615653 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P24-202ENST00000615653 CCDC102AQ96A19 550 aa6.91□□□□□ -1.3
HMGB1P24-202ENST00000615653 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
HMGB1P24-202ENST00000615653 NBPF14Q5TI25 921 aa6.9□□□□□ -1.3
HMGB1P24-202ENST00000615653 SEMA6BQ9H3T3 888 aa6.9□□□□□ -1.3
HMGB1P24-202ENST00000615653 MAGEB6P1A0A0J9YX57 407 aa6.89□□□□□ -1.31
HMGB1P24-202ENST00000615653 SSTR3P32745 418 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P24-202ENST00000615653 DHX9Q08211 1270 aaKnown RBP6.89□□□□□ -1.31
HMGB1P24-202ENST00000615653 DBN1Q16643 649 aa6.89□□□□□ -1.31
HMGB1P24-202ENST00000615653 ZNF395Q9H8N7 513 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P24-202ENST00000615653 ERFEQ4G0M1 354 aa6.88□□□□□ -1.31
HMGB1P24-202ENST00000615653 LYSMD3Q7Z3D4 306 aa6.88□□□□□ -1.31
HMGB1P24-202ENST00000615653 CD163Q86VB7 1156 aa6.88□□□□□ -1.31
HMGB1P24-202ENST00000615653 GOLGA2P5Q9HBQ8 144 aa6.88□□□□□ -1.31
HMGB1P24-202ENST00000615653 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P24-202ENST00000615653 PRPF38BQ5VTL8 546 aaKnown RBP6.87□□□□□ -1.31
HMGB1P24-202ENST00000615653 KRI1Q8N9T8 703 aaKnown RBP6.87□□□□□ -1.31
HMGB1P24-202ENST00000615653 NSFL1CQ9UNZ2 370 aaKnown RBP6.87□□□□□ -1.31
HMGB1P24-202ENST00000615653 SHISA8B8ZZ34 492 aa6.86□□□□□ -1.31
HMGB1P24-202ENST00000615653 MX2P20592 715 aa6.86□□□□□ -1.31
HMGB1P24-202ENST00000615653 HRCP23327 699 aa6.86□□□□□ -1.31
HMGB1P24-202ENST00000615653 PCDHB15Q9Y5E8 787 aa6.86□□□□□ -1.31
HMGB1P24-202ENST00000615653 GRIN2CQ14957 1233 aa6.85□□□□□ -1.31
HMGB1P24-202ENST00000615653 RSBN1LQ6PCB5 846 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P24-202ENST00000615653 GTPBP3Q969Y2 492 aaKnown RBP6.85□□□□□ -1.31
HMGB1P24-202ENST00000615653 KCTD15Q96SI1 283 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P24-202ENST00000615653 OXCT2Q9BYC2 517 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P24-202ENST00000615653 CDV3Q9UKY7 258 aaKnown RBP6.85□□□□□ -1.31
HMGB1P24-202ENST00000615653 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 LINC00114Q6XXX2 140 aa6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 GPKOWQ92917 476 aaPredicted RBP eCLIP6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 TRERF1Q96PN7 1200 aa6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 CARD14Q9BXL6 1004 aa6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 SUV39H2Q9H5I1 410 aa6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 ZBTB3Q9H5J0 574 aa6.84□□□□□ -1.31
HMGB1P24-202ENST00000615653 SCO2A0A1W2PP80 73 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 H7C1W4 665 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 ADH1AP07327 375 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 RHOQP17081 205 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 HOXB4P17483 251 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 PTGIRP43119 386 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 CHRNA4P43681 627 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 MAP2K3P46734 347 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 DOC2BQ14184 412 aa6.83□□□□□ -1.32
HMGB1P24-202ENST00000615653 INTS6LQ5JSJ4 861 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms