RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MORC1Q86VD1 984 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 KIF2CQ99661 725 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 TRIM27P14373 513 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 AK9Q5TCS8 1911 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 ST18O60284 1047 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 MBD3O95983 291 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 IDI1Q13907 227 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 RABEP1Q15276 862 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 CCDC66A2RUB6 948 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
TNFAIP3-208ENST00000615468 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.397e-7■■■■□ 23.3
TNFAIP3-208ENST00000615468 EXOSC9Q06265 439 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 BMP2KLQ5H9B9 411 aa12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 SPC24Q8NBT2 197 aa12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 ZFYVE16Q7Z3T8 1539 aa12.61□□□□□ -0.39
TNFAIP3-208ENST00000615468 ADCY5O95622 1261 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 E9PCH4 1651 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 CDC45O75419 566 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 NUCB1Q02818 461 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 ATF7IPQ6VMQ6 1270 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 GDPD2Q9HCC8 539 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 NOS1P29475 1434 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 MAGI2Q86UL8 1455 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 APBB1O00213 710 aa12.6□□□□□ -0.39
TNFAIP3-208ENST00000615468 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 MINK1Q8N4C8 1332 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 ATP10AO60312 1499 aa12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 MAST1Q9Y2H9 1570 aa12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 PHF14O94880 888 aa12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 CWC22Q9HCG8 908 aaKnown RBP12.59□□□□□ -0.39
TNFAIP3-208ENST00000615468 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 CLEC17AQ6ZS10 378 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 WDR63Q8IWG1 891 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 CABP2Q9NPB3 220 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 IPO8O15397 1037 aaKnown RBP12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 OGFRQ9NZT2 677 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 TIGD1Q96MW7 591 aa12.58□□□□□ -0.4
TNFAIP3-208ENST00000615468 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
TNFAIP3-208ENST00000615468 ZNF592Q92610 1267 aa12.57□□□□□ -0.4
TNFAIP3-208ENST00000615468 FEZ1Q99689 392 aa12.57□□□□□ -0.4
TNFAIP3-208ENST00000615468 PIK3C2GO75747 1445 aa12.57□□□□□ -0.4
TNFAIP3-208ENST00000615468 HCLS1P14317 486 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-208ENST00000615468 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
TNFAIP3-208ENST00000615468 POGZQ7Z3K3 1410 aa12.56□□□□□ -0.4
TNFAIP3-208ENST00000615468 GTF2F1P35269 517 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFAIP3-208ENST00000615468 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
TNFAIP3-208ENST00000615468 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-208ENST00000615468 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
TNFAIP3-208ENST00000615468 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-208ENST00000615468 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
TNFAIP3-208ENST00000615468 GPRASP1Q5JY77 1395 aa12.55□□□□□ -0.4
TNFAIP3-208ENST00000615468 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-208ENST00000615468 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
TNFAIP3-208ENST00000615468 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
TNFAIP3-208ENST00000615468 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-208ENST00000615468 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-208ENST00000615468 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
TNFAIP3-208ENST00000615468 NEK4P51957 841 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 MTHFSP49914 203 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 GABPB1Q06547 395 aaPredicted RBP12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 ASXL1Q8IXJ9 1541 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 NPATQ14207 1427 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 GOLGA6L6A8MZA4 724 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 NPHP1O15259 732 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 FAM184AQ8NB25 1140 aa12.53□□□□□ -0.4
TNFAIP3-208ENST00000615468 ABCA9Q8IUA7 1624 aa12.52□□□□□ -0.4
TNFAIP3-208ENST00000615468 UNC13BO14795 1591 aa12.52□□□□□ -0.41
TNFAIP3-208ENST00000615468 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
TNFAIP3-208ENST00000615468 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
TNFAIP3-208ENST00000615468 NAA30Q147X3 362 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 ZBTB9Q96C00 473 aa12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 PRDM15P57071 1507 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 GCC1Q96CN9 775 aa12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
TNFAIP3-208ENST00000615468 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-208ENST00000615468 SOX12O15370 315 aa12.5□□□□□ -0.41
TNFAIP3-208ENST00000615468 INTS3Q68E01 1043 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms