RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
CHD1-212ENST00000614616 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
CHD1-212ENST00000614616 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
CHD1-212ENST00000614616 SPATA32Q96LK8 384 aa16.19■□□□□ 0.18
CHD1-212ENST00000614616 A0A1B0GUL7 405 aa16.19■□□□□ 0.18
CHD1-212ENST00000614616 ARFGAP3Q9NP61 516 aa16.19■□□□□ 0.18
CHD1-212ENST00000614616 TAX1BP1Q86VP1 789 aa16.18■□□□□ 0.18
CHD1-212ENST00000614616 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
CHD1-212ENST00000614616 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
CHD1-212ENST00000614616 TERF1P54274 439 aa16.18■□□□□ 0.18
CHD1-212ENST00000614616 ME1P48163 572 aa16.17■□□□□ 0.18
CHD1-212ENST00000614616 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
CHD1-212ENST00000614616 SCAPERQ9BY12 1400 aa16.17■□□□□ 0.18
CHD1-212ENST00000614616 URI1O94763 535 aaPredicted RBP16.17■□□□□ 0.18
CHD1-212ENST00000614616 LIG1P18858 919 aa16.17■□□□□ 0.18
CHD1-212ENST00000614616 SNW1Q13573 536 aaKnown RBP16.17■□□□□ 0.18
CHD1-212ENST00000614616 KLHL40Q2TBA0 621 aa16.17■□□□□ 0.18
CHD1-212ENST00000614616 ZKSCAN5Q9Y2L8 839 aa16.17■□□□□ 0.18
CHD1-212ENST00000614616 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
CHD1-212ENST00000614616 HDGFP51858 240 aaKnown RBP16.16■□□□□ 0.18
CHD1-212ENST00000614616 ZSCAN23Q3MJ62 389 aa16.16■□□□□ 0.18
CHD1-212ENST00000614616 GBP6Q6ZN66 633 aa16.16■□□□□ 0.18
CHD1-212ENST00000614616 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHD1-212ENST00000614616 HSPA4P34932 840 aa16.16■□□□□ 0.18
CHD1-212ENST00000614616 TXLNAP40222 546 aa16.16■□□□□ 0.18
CHD1-212ENST00000614616 PAIP2Q9BPZ3 127 aaKnown RBP16.16■□□□□ 0.18
CHD1-212ENST00000614616 STIM1Q13586 685 aa16.16■□□□□ 0.18
CHD1-212ENST00000614616 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
CHD1-212ENST00000614616 GIGYF2Q6Y7W6 1299 aaKnown RBP16.15■□□□□ 0.18
CHD1-212ENST00000614616 TBC1D2Q9BYX2 928 aa16.15■□□□□ 0.18
CHD1-212ENST00000614616 RIPK4P57078 832 aa16.15■□□□□ 0.18
CHD1-212ENST00000614616 CHD1LQ86WJ1 897 aa16.15■□□□□ 0.18
CHD1-212ENST00000614616 STK38Q15208 465 aa16.15■□□□□ 0.18
CHD1-212ENST00000614616 RALYLQ86SE5 291 aaKnown RBP16.15■□□□□ 0.18
CHD1-212ENST00000614616 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
CHD1-212ENST00000614616 CDCA7LQ96GN5 454 aa16.15■□□□□ 0.18
CHD1-212ENST00000614616 IMMTQ16891 758 aaKnown RBP16.15■□□□□ 0.18
CHD1-212ENST00000614616 NKTRP30414 1462 aaKnown RBP16.14■□□□□ 0.18
CHD1-212ENST00000614616 CYP46A1Q9Y6A2 500 aa16.14■□□□□ 0.18
CHD1-212ENST00000614616 LARP1BQ659C4 914 aaKnown RBP16.14■□□□□ 0.17
CHD1-212ENST00000614616 LRSAM1Q6UWE0 723 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 MROH2BQ7Z745 1585 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 TUBB4BP68371 445 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 ZNF397Q8NF99 534 aaPredicted RBP16.14■□□□□ 0.17
CHD1-212ENST00000614616 CAVIN2O95810 425 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 CTAGE5O15320 804 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
CHD1-212ENST00000614616 C10orf67Q8IYJ2 551 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 SETSIPP0DME0 302 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 STK26Q9P289 416 aa16.14■□□□□ 0.17
CHD1-212ENST00000614616 IBSPP21815 317 aaPredicted RBP16.13■□□□□ 0.17
CHD1-212ENST00000614616 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
CHD1-212ENST00000614616 GABPB1Q06547 395 aaPredicted RBP16.13■□□□□ 0.17
CHD1-212ENST00000614616 MICALL1Q8N3F8 863 aa16.13■□□□□ 0.17
CHD1-212ENST00000614616 USP25Q9UHP3 1055 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 CCDC175P0C221 793 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 CFAP100Q494V2 611 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 VGLL3A8MV65 326 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 SPECC1LQ69YQ0 1117 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 SMARCA2P51531 1590 aa16.12■□□□□ 0.17
CHD1-212ENST00000614616 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
CHD1-212ENST00000614616 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHD1-212ENST00000614616 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
CHD1-212ENST00000614616 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
CHD1-212ENST00000614616 GNAI1P63096 354 aa16.11■□□□□ 0.17
CHD1-212ENST00000614616 RSPH14Q9UHP6 348 aa16.11■□□□□ 0.17
CHD1-212ENST00000614616 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
CHD1-212ENST00000614616 PPM1EQ8WY54 764 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 CAPN2P17655 700 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 GCOM1H8Y6P7 765 aaPredicted RBP16.1■□□□□ 0.17
CHD1-212ENST00000614616 KIF3BO15066 747 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 MYZAPP0CAP1 466 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 KRBA2Q6ZNG9 492 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 ANKS4BQ8N8V4 417 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 PNISRQ8TF01 805 aaKnown RBP16.1■□□□□ 0.17
CHD1-212ENST00000614616 ADAMTS8Q9UP79 889 aa16.1■□□□□ 0.17
CHD1-212ENST00000614616 CCDC150Q8NCX0 1101 aa16.09■□□□□ 0.17
CHD1-212ENST00000614616 DHX29Q7Z478 1369 aaKnown RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 MYCBPQ99417 103 aaPredicted RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 RRBP1Q9P2E9 1410 aaKnown RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 EVC2Q86UK5 1308 aa16.09■□□□□ 0.17
CHD1-212ENST00000614616 TUBB4AP04350 444 aa16.09■□□□□ 0.17
CHD1-212ENST00000614616 SRRTQ9BXP5 876 aaKnown RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
CHD1-212ENST00000614616 KIF4BQ2VIQ3 1234 aa16.09■□□□□ 0.17
CHD1-212ENST00000614616 CCAR1Q8IX12 1150 aaKnown RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 ZSCAN31Q96LW9 406 aaPredicted RBP16.09■□□□□ 0.17
CHD1-212ENST00000614616 MSL1Q68DK7 614 aa16.08■□□□□ 0.17
CHD1-212ENST00000614616 TRMT1Q9NXH9 659 aaKnown RBP16.08■□□□□ 0.17
CHD1-212ENST00000614616 CAMK4Q16566 473 aa16.08■□□□□ 0.16
CHD1-212ENST00000614616 AMOTL1Q8IY63 956 aa16.08■□□□□ 0.16
CHD1-212ENST00000614616 EBAG9O00559 213 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms