RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 ACEP12821 1306 aa6.85□□□□□ -1.31
SYCP1-209ENST00000613524 NLRP6P59044 892 aa6.85□□□□□ -1.31
SYCP1-209ENST00000613524 LRRC59Q96AG4 307 aaKnown RBP6.85□□□□□ -1.31
SYCP1-209ENST00000613524 KAT6BQ8WYB5 2073 aa6.85□□□□□ -1.31
SYCP1-209ENST00000613524 C1orf167Q5SNV9 1468 aa6.85□□□□□ -1.31
SYCP1-209ENST00000613524 SENP3-EIF4A1A0A087X0R7 540 aa6.84□□□□□ -1.31
SYCP1-209ENST00000613524 NPHP3Q7Z494 1330 aa6.84□□□□□ -1.31
SYCP1-209ENST00000613524 HSPA5P11021 654 aaKnown RBP6.84□□□□□ -1.31
SYCP1-209ENST00000613524 XIRP1Q702N8 1843 aaKnown RBP6.84□□□□□ -1.31
SYCP1-209ENST00000613524 ABCC11Q96J66 1382 aa6.84□□□□□ -1.31
SYCP1-209ENST00000613524 MST1RQ04912 1400 aa6.84□□□□□ -1.31
SYCP1-209ENST00000613524 POTEAQ6S8J7 498 aa6.84□□□□□ -1.32
SYCP1-209ENST00000613524 NKTRP30414 1462 aaKnown RBP6.83□□□□□ -1.32
SYCP1-209ENST00000613524 SETBP1Q9Y6X0 1596 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 AFF2P51816 1311 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 PRDM11Q9NQV5 511 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 CCDC61Q9Y6R9 512 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 USP47Q96K76 1375 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 EVC2Q86UK5 1308 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 PARP9Q8IXQ6 854 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 FBXO22Q8NEZ5 403 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 NLRP7Q8WX94 980 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 GPRASP1Q5JY77 1395 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 PIK3R4Q99570 1358 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 NALCNQ8IZF0 1738 aa6.83□□□□□ -1.32
SYCP1-209ENST00000613524 RGPD8O14715 1765 aaPredicted RBP6.82□□□□□ -1.32
SYCP1-209ENST00000613524 ONECUT3O60422 494 aaPredicted RBP6.82□□□□□ -1.32
SYCP1-209ENST00000613524 CSB-PGBD3P0DP91 1061 aa6.82□□□□□ -1.32
SYCP1-209ENST00000613524 NME9Q86XW9 330 aa6.82□□□□□ -1.32
SYCP1-209ENST00000613524 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
SYCP1-209ENST00000613524 DPYSL4O14531 572 aa6.82□□□□□ -1.32
SYCP1-209ENST00000613524 USP21Q9UK80 565 aa6.82□□□□□ -1.32
SYCP1-209ENST00000613524 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
SYCP1-209ENST00000613524 EVA1CP58658 441 aa6.82□□□□□ -1.32
SYCP1-209ENST00000613524 QTRT2Q9H974 415 aaKnown RBP6.82□□□□□ -1.32
SYCP1-209ENST00000613524 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
SYCP1-209ENST00000613524 REPIN1Q9BWE0 567 aaKnown RBP6.81□□□□□ -1.32
SYCP1-209ENST00000613524 BTG4Q9NY30 223 aa6.81□□□□□ -1.32
SYCP1-209ENST00000613524 PPIP5K1Q6PFW1 1433 aa6.81□□□□□ -1.32
SYCP1-209ENST00000613524 JCADQ9P266 1359 aa6.81□□□□□ -1.32
SYCP1-209ENST00000613524 PHLPP1O60346 1717 aa6.81□□□□□ -1.32
SYCP1-209ENST00000613524 CENPBP07199 599 aaPredicted RBP6.81□□□□□ -1.32
SYCP1-209ENST00000613524 DIP2AQ14689 1571 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 MS4A4AQ96JQ5 239 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 MYOM2P54296 1465 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 PRR29P0C7W0 189 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 TMF1P82094 1093 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 FAM98CQ17RN3 349 aaKnown RBP6.8□□□□□ -1.32
SYCP1-209ENST00000613524 CC2D1BQ5T0F9 858 aaKnown RBP6.8□□□□□ -1.32
SYCP1-209ENST00000613524 RYDENQ9NUL5 291 aaKnown RBP6.8□□□□□ -1.32
SYCP1-209ENST00000613524 RGS17Q9UGC6 210 aaPredicted RBP6.8□□□□□ -1.32
SYCP1-209ENST00000613524 PTCH1Q13635 1447 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 FAM135BQ49AJ0 1406 aa6.8□□□□□ -1.32
SYCP1-209ENST00000613524 C11orf95C9JLR9 678 aaPredicted RBP6.79□□□□□ -1.32
SYCP1-209ENST00000613524 RRS1Q15050 365 aaKnown RBP6.79□□□□□ -1.32
SYCP1-209ENST00000613524 EIF3AQ14152 1382 aaKnown RBP6.79□□□□□ -1.32
SYCP1-209ENST00000613524 KDM5AP29375 1690 aaKnown RBP6.79□□□□□ -1.32
SYCP1-209ENST00000613524 GPR37O15354 613 aa6.79□□□□□ -1.32
SYCP1-209ENST00000613524 IRF5Q13568 498 aa6.79□□□□□ -1.32
SYCP1-209ENST00000613524 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
SYCP1-209ENST00000613524 RETREG2Q8NC44 543 aa6.79□□□□□ -1.32
SYCP1-209ENST00000613524 ADGRB1O14514 1584 aa6.79□□□□□ -1.32
SYCP1-209ENST00000613524 PSEN1P49768 467 aa6.79□□□□□ -1.32
SYCP1-209ENST00000613524 CCDC102AQ96A19 550 aa6.79□□□□□ -1.32
SYCP1-209ENST00000613524 XRN1Q8IZH2 1706 aaKnown RBP6.79□□□□□ -1.32
SYCP1-209ENST00000613524 KTN1Q86UP2 1357 aaKnown RBP6.78□□□□□ -1.32
SYCP1-209ENST00000613524 IFT172Q9UG01 1749 aa6.78□□□□□ -1.32
SYCP1-209ENST00000613524 FAM83GA6ND36 823 aa6.78□□□□□ -1.32
SYCP1-209ENST00000613524 EMILIN3Q9NT22 766 aa6.78□□□□□ -1.32
SYCP1-209ENST00000613524 PCDH10Q9P2E7 1040 aa6.78□□□□□ -1.32
SYCP1-209ENST00000613524 USHBP1Q8N6Y0 703 aa6.78□□□□□ -1.32
SYCP1-209ENST00000613524 SGIP1Q9BQI5 828 aa6.78□□□□□ -1.32
SYCP1-209ENST00000613524 CHRM1P11229 460 aaPredicted RBP6.77□□□□□ -1.33
SYCP1-209ENST00000613524 IFNL1Q8IU54 200 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 SPATA31A3Q5VYP0 1347 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 NWD1Q149M9 1564 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 LRP6O75581 1613 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 SETD1AO15047 1707 aaKnown RBP6.77□□□□□ -1.33
SYCP1-209ENST00000613524 PNPLA6Q8IY17 1366 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 KIAA0232Q92628 1395 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 RXRBP28702 533 aa6.77□□□□□ -1.33
SYCP1-209ENST00000613524 SOS2Q07890 1332 aaPredicted RBP6.77□□□□□ -1.33
SYCP1-209ENST00000613524 TOM1L2Q6ZVM7 507 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 DDX27Q96GQ7 796 aaKnown RBP6.76□□□□□ -1.33
SYCP1-209ENST00000613524 NLRP2Q9NX02 1062 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 TRAK2O60296 914 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 MS4A1P11836 297 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 DDX10Q13206 875 aaKnown RBP6.76□□□□□ -1.33
SYCP1-209ENST00000613524 TESK2Q96S53 571 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 GZF1Q9H116 711 aaPredicted RBP6.76□□□□□ -1.33
SYCP1-209ENST00000613524 PANK3Q9H999 370 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 NRXN1Q9ULB1 1477 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 GRXCR2A6NFK2 248 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 GCP02774 474 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 TTLL12Q14166 644 aaPredicted RBP6.76□□□□□ -1.33
SYCP1-209ENST00000613524 LARP1Q6PKG0 1096 aaKnown RBP6.76□□□□□ -1.33
SYCP1-209ENST00000613524 TERF2IPQ9NYB0 399 aa6.76□□□□□ -1.33
SYCP1-209ENST00000613524 MED1Q15648 1581 aaPredicted RBP6.75□□□□□ -1.33
SYCP1-209ENST00000613524 AMPHP49418 695 aa6.75□□□□□ -1.33
SYCP1-209ENST00000613524 PDAP1Q13442 181 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms