RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 CCDC112Q8NEF3 446 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 TSPYL1Q9H0U9 437 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 ERLIN1O75477 346 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 TTLL5Q6EMB2 1281 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 FAM69CQ0P6D2 419 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 PPFIBP1Q86W92 1011 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 ATF7IPQ6VMQ6 1270 aa20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 NOL7Q9UMY1 257 aaKnown RBP20.62■□□□□ 0.89
HMGXB3-206ENST00000613459 EIF3JO75822 258 aaKnown RBP20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 RBM10P98175 930 aaKnown RBP20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 CFAP70Q5T0N1 1121 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 ZFYVE27Q5T4F4 411 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 ABTB2Q8N961 1025 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 FIBPO43427 364 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 TNMDQ9H2S6 317 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 CTNNA3Q9UI47 895 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
HMGXB3-206ENST00000613459 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 C9orf84Q5VXU9 1444 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 GOLGA6L10A6NI86 522 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 WWC2Q6AWC2 1192 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 TMEM132EQ6IEE7 984 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 ZRSR2Q15696 482 aaKnown RBP20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 IQCEQ6IPM2 695 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 CDCA7LQ96GN5 454 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 ERBINQ96RT1 1412 aa20.6■□□□□ 0.89
HMGXB3-206ENST00000613459 KIAA0754O94854 1291 aa20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 CFAP45Q9UL16 551 aa20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 SLC52A1Q9NWF4 448 aa20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 SERPINC1P01008 464 aa20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 IKQ13123 557 aaPredicted RBP20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 KRT18P05783 430 aaKnown RBP20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 RPAP2Q8IXW5 612 aaPredicted RBP20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 HMGB2P26583 209 aaKnown RBP20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
HMGXB3-206ENST00000613459 SLC4A2P04920 1241 aa20.58■□□□□ 0.89
HMGXB3-206ENST00000613459 UQCRHLA0A096LP55 91 aa20.58■□□□□ 0.89
HMGXB3-206ENST00000613459 UQCRHP07919 91 aa20.58■□□□□ 0.89
HMGXB3-206ENST00000613459 CNNM1Q9NRU3 951 aa20.58■□□□□ 0.89
HMGXB3-206ENST00000613459 SPC24Q8NBT2 197 aa20.58■□□□□ 0.88
HMGXB3-206ENST00000613459 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 CHD1LQ86WJ1 897 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 ANKRD18AQ8IVF6 992 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 WASF1Q92558 559 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 GOLGA6L7A0A1B0GV03 622 aa20.57■□□□□ 0.88
HMGXB3-206ENST00000613459 AKNAQ7Z591 1439 aa20.56■□□□□ 0.88
HMGXB3-206ENST00000613459 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
HMGXB3-206ENST00000613459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.56■□□□□ 0.88
HMGXB3-206ENST00000613459 CFTRP13569 1480 aa20.56■□□□□ 0.88
HMGXB3-206ENST00000613459 CCDC69A6NI79 296 aa20.56■□□□□ 0.88
HMGXB3-206ENST00000613459 TAF3Q5VWG9 929 aa20.56■□□□□ 0.88
HMGXB3-206ENST00000613459 CEP57L1Q8IYX8 460 aa20.55■□□□□ 0.88
HMGXB3-206ENST00000613459 PRAM1Q96QH2 718 aa20.55■□□□□ 0.88
HMGXB3-206ENST00000613459 BLOC1S2Q6QNY1 142 aa20.55■□□□□ 0.88
HMGXB3-206ENST00000613459 SMTNL1A8MU46 457 aa20.54■□□□□ 0.88
HMGXB3-206ENST00000613459 USP8P40818 1118 aa20.54■□□□□ 0.88
HMGXB3-206ENST00000613459 DAPK1P53355 1430 aa20.54■□□□□ 0.88
HMGXB3-206ENST00000613459 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
HMGXB3-206ENST00000613459 FCHSD2O94868 740 aa20.54■□□□□ 0.88
HMGXB3-206ENST00000613459 ME1P48163 572 aa20.54■□□□□ 0.88
HMGXB3-206ENST00000613459 SOGA3Q5TF21 947 aa20.53■□□□□ 0.88
HMGXB3-206ENST00000613459 FMNL2Q96PY5 1086 aa20.53■□□□□ 0.88
HMGXB3-206ENST00000613459 KIF2AO00139 706 aaPredicted RBP20.53■□□□□ 0.88
HMGXB3-206ENST00000613459 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
HMGXB3-206ENST00000613459 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
HMGXB3-206ENST00000613459 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
HMGXB3-206ENST00000613459 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
HMGXB3-206ENST00000613459 TROQ12816 1431 aaPredicted RBP20.52■□□□□ 0.88
HMGXB3-206ENST00000613459 TXNDC2Q86VQ3 553 aa20.52■□□□□ 0.88
HMGXB3-206ENST00000613459 ATP2B1P20020 1258 aa20.52■□□□□ 0.88
HMGXB3-206ENST00000613459 CCDC181Q5TID7 509 aa20.52■□□□□ 0.88
HMGXB3-206ENST00000613459 PDCL2Q8N4E4 241 aa20.52■□□□□ 0.87
HMGXB3-206ENST00000613459 PDRG1Q9NUG6 133 aa20.52■□□□□ 0.87
HMGXB3-206ENST00000613459 CDK19Q9BWU1 502 aa20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 RTEL1-TNFRSF6BF6WH68 1400 aa20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 DEF6Q9H4E7 631 aa20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 THEMISQ8N1K5 641 aaPredicted RBP20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 CABP4P57796 275 aa20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 BRPF1P55201 1214 aaPredicted RBP20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 SPATA32Q96LK8 384 aa20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 BMP2KQ9NSY1 1161 aaPredicted RBP20.51■□□□□ 0.87
HMGXB3-206ENST00000613459 NUP62CLQ9H1M0 184 aa20.5■□□□□ 0.87
HMGXB3-206ENST00000613459 ESCO1Q5FWF5 840 aa20.5■□□□□ 0.87
HMGXB3-206ENST00000613459 C1orf115Q9H7X2 142 aa20.5■□□□□ 0.87
HMGXB3-206ENST00000613459 SKIDA1Q1XH10 827 aa20.5■□□□□ 0.87
HMGXB3-206ENST00000613459 PLEKHH1Q9ULM0 1364 aa20.5■□□□□ 0.87
HMGXB3-206ENST00000613459 CEP131Q9UPN4 1083 aa20.5■□□□□ 0.87
HMGXB3-206ENST00000613459 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 KRI1Q8N9T8 703 aaKnown RBP20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 ABCC11Q96J66 1382 aa20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 BCAR3O75815 825 aa20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 NBPF1Q3BBV0 1214 aa20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 ZNF530Q6P9A1 599 aaPredicted RBP20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 TSR2Q969E8 191 aaKnown RBP20.49■□□□□ 0.87
HMGXB3-206ENST00000613459 TMEM132AQ24JP5 1023 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms