RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 MYT1Q01538 1121 aa17.69■□□□□ 0.42
CSTF1-208ENST00000613138 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
CSTF1-208ENST00000613138 SPATA31A1Q5TZJ5 1347 aa17.69■□□□□ 0.42
CSTF1-208ENST00000613138 EVA1CP58658 441 aa17.68■□□□□ 0.42
CSTF1-208ENST00000613138 FAM182BQ5T319 152 aa17.68■□□□□ 0.42
CSTF1-208ENST00000613138 CARD14Q9BXL6 1004 aa17.68■□□□□ 0.42
CSTF1-208ENST00000613138 AATKQ6ZMQ8 1374 aa17.67■□□□□ 0.42
CSTF1-208ENST00000613138 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
CSTF1-208ENST00000613138 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
CSTF1-208ENST00000613138 SLC24A1O60721 1099 aa17.65■□□□□ 0.42
CSTF1-208ENST00000613138 NSD3Q9BZ95 1437 aa17.64■□□□□ 0.42
CSTF1-208ENST00000613138 KCNH5Q8NCM2 988 aa17.64■□□□□ 0.41
CSTF1-208ENST00000613138 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
CSTF1-208ENST00000613138 FYB1O15117 783 aa17.63■□□□□ 0.41
CSTF1-208ENST00000613138 CDCA8Q53HL2 280 aa17.63■□□□□ 0.41
CSTF1-208ENST00000613138 RGPD2P0DJD1 1756 aa17.63■□□□□ 0.41
CSTF1-208ENST00000613138 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
CSTF1-208ENST00000613138 COG3Q96JB2 828 aa17.6■□□□□ 0.41
CSTF1-208ENST00000613138 CRB1P82279 1406 aa17.6■□□□□ 0.41
CSTF1-208ENST00000613138 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
CSTF1-208ENST00000613138 RRS1Q15050 365 aaKnown RBP17.59■□□□□ 0.41
CSTF1-208ENST00000613138 TOM1L2Q6ZVM7 507 aa17.59■□□□□ 0.41
CSTF1-208ENST00000613138 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
CSTF1-208ENST00000613138 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.41
CSTF1-208ENST00000613138 MAP3K19Q56UN5 1328 aa17.58■□□□□ 0.4
CSTF1-208ENST00000613138 WDR17Q8IZU2 1322 aa17.58■□□□□ 0.4
CSTF1-208ENST00000613138 CSB-PGBD3P0DP91 1061 aa17.58■□□□□ 0.4
CSTF1-208ENST00000613138 LRRC37A3O60309 1634 aa17.58■□□□□ 0.4
CSTF1-208ENST00000613138 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
CSTF1-208ENST00000613138 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
CSTF1-208ENST00000613138 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
CSTF1-208ENST00000613138 PANK3Q9H999 370 aa17.56■□□□□ 0.4
CSTF1-208ENST00000613138 ABCC6O95255 1503 aa17.56■□□□□ 0.4
CSTF1-208ENST00000613138 MAP2P11137 1827 aaKnown RBP17.56■□□□□ 0.4
CSTF1-208ENST00000613138 ANKRD24Q8TF21 1146 aa17.55■□□□□ 0.4
CSTF1-208ENST00000613138 ANKRD26Q9UPS8 1709 aa17.55■□□□□ 0.4
CSTF1-208ENST00000613138 ERBB3P21860 1342 aa17.54■□□□□ 0.4
CSTF1-208ENST00000613138 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
CSTF1-208ENST00000613138 TNS1Q9HBL0 1735 aaKnown RBP17.53■□□□□ 0.4
CSTF1-208ENST00000613138 HOXC9P31274 260 aa17.53■□□□□ 0.4
CSTF1-208ENST00000613138 IP6K1Q92551 441 aa17.53■□□□□ 0.4
CSTF1-208ENST00000613138 CARD10Q9BWT7 1032 aa17.52■□□□□ 0.4
CSTF1-208ENST00000613138 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
CSTF1-208ENST00000613138 DISP2A7MBM2 1401 aa17.52■□□□□ 0.4
CSTF1-208ENST00000613138 AMPHP49418 695 aa17.51■□□□□ 0.39
CSTF1-208ENST00000613138 THRAP3Q9Y2W1 955 aaKnown RBP17.51■□□□□ 0.39
CSTF1-208ENST00000613138 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
CSTF1-208ENST00000613138 SBF2Q86WG5 1849 aa17.51■□□□□ 0.39
CSTF1-208ENST00000613138 BLMP54132 1417 aaPredicted RBP17.5■□□□□ 0.39
CSTF1-208ENST00000613138 TNNT2P45379 298 aaPredicted RBP17.5■□□□□ 0.39
CSTF1-208ENST00000613138 FAM208AQ9UK61 1670 aaKnown RBP17.5■□□□□ 0.39
CSTF1-208ENST00000613138 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
CSTF1-208ENST00000613138 PDE3BQ13370 1112 aa17.49■□□□□ 0.39
CSTF1-208ENST00000613138 KAT6BQ8WYB5 2073 aa17.49■□□□□ 0.39
CSTF1-208ENST00000613138 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
CSTF1-208ENST00000613138 WASHC2AQ641Q2 1341 aa17.48■□□□□ 0.39
CSTF1-208ENST00000613138 TRIM37O94972 964 aa17.48■□□□□ 0.39
CSTF1-208ENST00000613138 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
CSTF1-208ENST00000613138 USHBP1Q8N6Y0 703 aa17.48■□□□□ 0.39
CSTF1-208ENST00000613138 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
CSTF1-208ENST00000613138 CCDC7Q96M83 1385 aa17.46■□□□□ 0.39
CSTF1-208ENST00000613138 DDB1Q16531 1140 aa17.46■□□□□ 0.39
CSTF1-208ENST00000613138 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.39
CSTF1-208ENST00000613138 PPM1GO15355 546 aaPredicted RBP17.45■□□□□ 0.38
CSTF1-208ENST00000613138 SHANK3Q9BYB0 1731 aa17.44■□□□□ 0.38
CSTF1-208ENST00000613138 RTL1A6NKG5 1358 aa17.44■□□□□ 0.38
CSTF1-208ENST00000613138 EN1Q05925 392 aaPredicted RBP17.44■□□□□ 0.38
CSTF1-208ENST00000613138 CNGB1Q14028 1251 aaPredicted RBP17.44■□□□□ 0.38
CSTF1-208ENST00000613138 NBPF6Q5VWK0 638 aa17.44■□□□□ 0.38
CSTF1-208ENST00000613138 NBPF4Q96M43 638 aa17.44■□□□□ 0.38
CSTF1-208ENST00000613138 FAM196AQ6ZSG2 479 aa17.43■□□□□ 0.38
CSTF1-208ENST00000613138 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
CSTF1-208ENST00000613138 POLKQ9UBT6 870 aa17.43■□□□□ 0.38
CSTF1-208ENST00000613138 MEGF6O75095 1541 aa17.42■□□□□ 0.38
CSTF1-208ENST00000613138 FLT4P35916 1363 aa17.42■□□□□ 0.38
CSTF1-208ENST00000613138 TNS2Q63HR2 1409 aa17.42■□□□□ 0.38
CSTF1-208ENST00000613138 IL2RBP14784 551 aa17.41■□□□□ 0.38
CSTF1-208ENST00000613138 SF3B2Q13435 895 aaKnown RBP17.41■□□□□ 0.38
CSTF1-208ENST00000613138 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
CSTF1-208ENST00000613138 INSRP06213 1382 aa17.4■□□□□ 0.38
CSTF1-208ENST00000613138 OVOS2A0A0G2JMS6 1433 aa17.4■□□□□ 0.38
CSTF1-208ENST00000613138 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
CSTF1-208ENST00000613138 EXOC5O00471 708 aa17.39■□□□□ 0.37
CSTF1-208ENST00000613138 PER1O15534 1290 aaPredicted RBP17.39■□□□□ 0.37
CSTF1-208ENST00000613138 EZH2Q15910 746 aaKnown RBP17.39■□□□□ 0.37
CSTF1-208ENST00000613138 APBA3O96018 575 aa17.38■□□□□ 0.37
CSTF1-208ENST00000613138 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
CSTF1-208ENST00000613138 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
CSTF1-208ENST00000613138 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
CSTF1-208ENST00000613138 BAG6P46379 1132 aa17.37■□□□□ 0.37
CSTF1-208ENST00000613138 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
CSTF1-208ENST00000613138 KCNQ2O43526 872 aa17.36■□□□□ 0.37
CSTF1-208ENST00000613138 RREB1Q92766 1687 aa17.36■□□□□ 0.37
CSTF1-208ENST00000613138 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
CSTF1-208ENST00000613138 CAMKK2Q96RR4 588 aa17.35■□□□□ 0.37
CSTF1-208ENST00000613138 NSD2O96028 1365 aa17.35■□□□□ 0.37
CSTF1-208ENST00000613138 SMG6Q86US8 1419 aaKnown RBP17.35■□□□□ 0.37
CSTF1-208ENST00000613138 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
CSTF1-208ENST00000613138 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
CSTF1-208ENST00000613138 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms