RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 AEBP1Q8IUX7 1158 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 NBPF8Q3BBV2 869 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ANO2Q9NQ90 1003 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ZRANB2O95218 330 aaKnown RBP eCLIP12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ATP2B3Q16720 1220 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 OLFM4Q6UX06 510 aa12.78□□□□□ -0.36
CNTNAP3B-211ENST00000612828 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.36
CNTNAP3B-211ENST00000612828 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.36
CNTNAP3B-211ENST00000612828 LMAN1P49257 510 aa12.77□□□□□ -0.36
CNTNAP3B-211ENST00000612828 IPO4Q8TEX9 1081 aaKnown RBP12.77□□□□□ -0.36
CNTNAP3B-211ENST00000612828 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.36
CNTNAP3B-211ENST00000612828 FAM180AQ6UWF9 173 aa12.77□□□□□ -0.37
CNTNAP3B-211ENST00000612828 TRAK1Q9UPV9 953 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 USP8P40818 1118 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 BRMS1Q9HCU9 246 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ANKFY1Q9P2R3 1169 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SASS6Q6UVJ0 657 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 LCA5Q86VQ0 697 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SMARCE1Q969G3 411 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 NFKBIBQ15653 356 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 RPUSD2Q8IZ73 545 aaKnown RBP12.76□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SAFBQ15424 915 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PIBF1Q8WXW3 757 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SMC2O95347 1197 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SSBP05455 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 FGD6Q6ZV73 1430 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 BRPF3Q9ULD4 1205 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 AKNAQ7Z591 1439 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 TERF1P54274 439 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 MIPOL1Q8TD10 442 aa12.75□□□□□ -0.37
CNTNAP3B-211ENST00000612828 NDC80O14777 642 aa12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 C16orf71Q8IYS4 520 aaPredicted RBP12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 EPSTI1Q96J88 318 aa12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 KIF5CO60282 957 aa12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PFDN4Q9NQP4 134 aa12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 SMARCA2P51531 1590 aa12.74□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ST18O60284 1047 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 GON4LQ3T8J9 2241 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 CCDC66A2RUB6 948 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 AMPHP49418 695 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 IFNLR1Q8IU57 520 aaPredicted RBP12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PDE1CQ14123 709 aaPredicted RBP12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 NAA25Q14CX7 972 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 FERMT2Q96AC1 680 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 GSTTP1A0A1W2PQM5 241 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ZNF76P36508 570 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PDCD7Q8N8D1 485 aaKnown RBP12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
CNTNAP3B-211ENST00000612828 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
CNTNAP3B-211ENST00000612828 RUFY2Q8WXA3 655 aa12.72□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PRC1O43663 620 aa12.72□□□□□ -0.37
CNTNAP3B-211ENST00000612828 UACAQ9BZF9 1416 aa12.72□□□□□ -0.37
CNTNAP3B-211ENST00000612828 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ITM2BQ9Y287 266 aa12.71□□□□□ -0.37
CNTNAP3B-211ENST00000612828 RRBP1Q9P2E9 1410 aaKnown RBP12.71□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ERICH4A6NGS2 130 aa12.71□□□□□ -0.37
CNTNAP3B-211ENST00000612828 CTNNA2P26232 953 aa12.71□□□□□ -0.37
CNTNAP3B-211ENST00000612828 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
CNTNAP3B-211ENST00000612828 DNA2P51530 1060 aa12.71□□□□□ -0.38
CNTNAP3B-211ENST00000612828 KANK1Q14678 1352 aa12.71□□□□□ -0.38
CNTNAP3B-211ENST00000612828 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 LRRC43Q8N309 656 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 NGDNQ8NEJ9 315 aaKnown RBP12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 VPS37CA5D8V6 355 aaPredicted RBP12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 PANK1Q8TE04 598 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 WASHC4Q2M389 1173 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CUL4BQ13620 913 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 C1orf141Q5JVX7 400 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 ERLIN1O75477 346 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TSNARE1Q96NA8 513 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 HAUS7Q99871 368 aa12.7□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TMEM259Q4ZIN3 620 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CEP135Q66GS9 1140 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 SMC1BQ8NDV3 1235 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TRIM5Q9C035 493 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 C11orf95C9JLR9 678 aaPredicted RBP12.69□□□□□ -0.38
CNTNAP3B-211ENST00000612828 CHMP2AO43633 222 aa12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 TTC30BQ8N4P2 665 aa12.68□□□□□ -0.38
CNTNAP3B-211ENST00000612828 HOOK3Q86VS8 718 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms