RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
CFDP1-211ENST00000612761 ZIC2O95409 532 aaPredicted RBP9.25□□□□□ -0.93
CFDP1-211ENST00000612761 TIMP2P16035 220 aa9.25□□□□□ -0.93
CFDP1-211ENST00000612761 FLIIQ13045 1269 aa9.25□□□□□ -0.93
CFDP1-211ENST00000612761 CCDC116Q8IYX3 515 aa9.25□□□□□ -0.93
CFDP1-211ENST00000612761 KLF16Q9BXK1 252 aaPredicted RBP9.25□□□□□ -0.93
CFDP1-211ENST00000612761 ATP13A2Q9NQ11 1180 aa9.25□□□□□ -0.93
CFDP1-211ENST00000612761 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
CFDP1-211ENST00000612761 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
CFDP1-211ENST00000612761 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
CFDP1-211ENST00000612761 ZNF592Q92610 1267 aa9.24□□□□□ -0.93
CFDP1-211ENST00000612761 MCCD1P59942 119 aaPredicted RBP9.23□□□□□ -0.93
CFDP1-211ENST00000612761 DHX9Q08211 1270 aaKnown RBP9.23□□□□□ -0.93
CFDP1-211ENST00000612761 ITPKCQ96DU7 683 aa9.23□□□□□ -0.93
CFDP1-211ENST00000612761 GDPD2Q9HCC8 539 aa9.23□□□□□ -0.93
CFDP1-211ENST00000612761 INTS6LQ5JSJ4 861 aaKnown RBP9.22□□□□□ -0.93
CFDP1-211ENST00000612761 ZFAND3Q9H8U3 227 aa9.22□□□□□ -0.93
CFDP1-211ENST00000612761 PGPEP1Q9NXJ5 209 aa9.22□□□□□ -0.93
CFDP1-211ENST00000612761 ABL2P42684 1182 aa9.21□□□□□ -0.94
CFDP1-211ENST00000612761 IRF5Q13568 498 aa9.21□□□□□ -0.94
CFDP1-211ENST00000612761 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.94
CFDP1-211ENST00000612761 SENP2Q9HC62 589 aa9.21□□□□□ -0.94
CFDP1-211ENST00000612761 GMPR2Q9P2T1 348 aaKnown RBP9.21□□□□□ -0.94
CFDP1-211ENST00000612761 ESPNB1AK53 854 aa9.2□□□□□ -0.94
CFDP1-211ENST00000612761 POTECB2RU33 542 aa9.2□□□□□ -0.94
CFDP1-211ENST00000612761 BMP1P13497 986 aa9.2□□□□□ -0.94
CFDP1-211ENST00000612761 RAB15P59190 212 aa9.19□□□□□ -0.94
CFDP1-211ENST00000612761 SEPT12Q8IYM1 358 aa9.19□□□□□ -0.94
CFDP1-211ENST00000612761 COG6Q9Y2V7 657 aa9.19□□□□□ -0.94
CFDP1-211ENST00000612761 C11orf95C9JLR9 678 aaPredicted RBP9.18□□□□□ -0.94
CFDP1-211ENST00000612761 RAD21O60216 631 aa9.18□□□□□ -0.94
CFDP1-211ENST00000612761 GIGYF1O75420 1035 aaPredicted RBP9.18□□□□□ -0.94
CFDP1-211ENST00000612761 UBTFP17480 764 aaKnown RBP9.18□□□□□ -0.94
CFDP1-211ENST00000612761 EIF4G2P78344 907 aaKnown RBP eCLIP9.18□□□□□ -0.94
CFDP1-211ENST00000612761 WASHC4Q2M389 1173 aa9.18□□□□□ -0.94
CFDP1-211ENST00000612761 MRPL14Q6P1L8 145 aaKnown RBP9.18□□□□□ -0.94
CFDP1-211ENST00000612761 TRIM46Q7Z4K8 759 aa9.18□□□□□ -0.94
CFDP1-211ENST00000612761 KIFC2Q96AC6 838 aa9.18□□□□□ -0.94
CFDP1-211ENST00000612761 SCARF1Q14162 830 aa9.17□□□□□ -0.94
CFDP1-211ENST00000612761 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
CFDP1-211ENST00000612761 CCDC125Q86Z20 511 aa9.17□□□□□ -0.94
CFDP1-211ENST00000612761 TRIM52Q96A61 297 aa9.17□□□□□ -0.94
CFDP1-211ENST00000612761 ERVH48-1M5A8F1 160 aa9.16□□□□□ -0.94
CFDP1-211ENST00000612761 UPP2O95045 317 aa9.16□□□□□ -0.94
CFDP1-211ENST00000612761 VAC14Q08AM6 782 aa9.16□□□□□ -0.94
CFDP1-211ENST00000612761 WWC1Q8IX03 1113 aa9.16□□□□□ -0.94
CFDP1-211ENST00000612761 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
CFDP1-211ENST00000612761 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
CFDP1-211ENST00000612761 TMPRSS4Q9NRS4 437 aa9.15□□□□□ -0.94
CFDP1-211ENST00000612761 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
CFDP1-211ENST00000612761 POM121Q96HA1 1249 aa9.14□□□□□ -0.95
CFDP1-211ENST00000612761 ZFP42Q96MM3 310 aa9.14□□□□□ -0.95
CFDP1-211ENST00000612761 PURBQ96QR8 312 aaKnown RBP9.14□□□□□ -0.95
CFDP1-211ENST00000612761 TSEN34Q9BSV6 310 aaKnown RBP9.14□□□□□ -0.95
CFDP1-211ENST00000612761 CBLBQ13191 982 aa9.13□□□□□ -0.95
CFDP1-211ENST00000612761 Q6ZVU0 165 aa9.13□□□□□ -0.95
CFDP1-211ENST00000612761 LINC00528Q8N1L1 170 aa9.13□□□□□ -0.95
CFDP1-211ENST00000612761 CEP126Q9P2H0 1117 aa9.13□□□□□ -0.95
CFDP1-211ENST00000612761 BMP2P12643 396 aa9.12□□□□□ -0.95
CFDP1-211ENST00000612761 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
CFDP1-211ENST00000612761 C6orf118Q5T5N4 469 aa9.12□□□□□ -0.95
CFDP1-211ENST00000612761 SOX11P35716 441 aa9.11□□□□□ -0.95
CFDP1-211ENST00000612761 LILRA1O75019 489 aa9.1□□□□□ -0.95
CFDP1-211ENST00000612761 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
CFDP1-211ENST00000612761 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
CFDP1-211ENST00000612761 PCDHB11Q9Y5F2 797 aa9.09□□□□□ -0.95
CFDP1-211ENST00000612761 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
CFDP1-211ENST00000612761 SLFNL1Q499Z3 407 aa9.08□□□□□ -0.96
CFDP1-211ENST00000612761 ADH1AP07327 375 aa9.07□□□□□ -0.96
CFDP1-211ENST00000612761 RELBQ01201 579 aa9.07□□□□□ -0.96
CFDP1-211ENST00000612761 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
CFDP1-211ENST00000612761 AGBL1Q96MI9 1066 aa9.07□□□□□ -0.96
CFDP1-211ENST00000612761 SPINT1O43278 529 aa9.06□□□□□ -0.96
CFDP1-211ENST00000612761 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
CFDP1-211ENST00000612761 CLUAP1Q96AJ1 413 aa9.06□□□□□ -0.96
CFDP1-211ENST00000612761 ZNF775Q96BV0 537 aaPredicted RBP9.06□□□□□ -0.96
CFDP1-211ENST00000612761 ESF1Q9H501 851 aaKnown RBP9.06□□□□□ -0.96
CFDP1-211ENST00000612761 RNF135Q8IUD6 432 aa9.05□□□□□ -0.96
CFDP1-211ENST00000612761 PHTF2Q8N3S3 785 aa9.05□□□□□ -0.96
CFDP1-211ENST00000612761 CCDC85AQ96PX6 553 aaPredicted RBP9.05□□□□□ -0.96
CFDP1-211ENST00000612761 MAN1A2O60476 641 aa9.04□□□□□ -0.96
CFDP1-211ENST00000612761 PTGIRP43119 386 aa9.04□□□□□ -0.96
CFDP1-211ENST00000612761 SOS2Q07890 1332 aaPredicted RBP9.04□□□□□ -0.96
CFDP1-211ENST00000612761 ATP5J2-PTCD1G3V325 749 aa9.03□□□□□ -0.96
CFDP1-211ENST00000612761 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-211ENST00000612761 SCTRP47872 440 aa9.03□□□□□ -0.96
CFDP1-211ENST00000612761 PROSER2Q86WR7 435 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-211ENST00000612761 ALG2Q9H553 416 aa9.03□□□□□ -0.96
CFDP1-211ENST00000612761 ZNF395Q9H8N7 513 aaPredicted RBP9.03□□□□□ -0.96
CFDP1-211ENST00000612761 DOLKQ9UPQ8 538 aa9.03□□□□□ -0.96
CFDP1-211ENST00000612761 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
CFDP1-211ENST00000612761 CYP2U1Q7Z449 544 aa9.02□□□□□ -0.97
CFDP1-211ENST00000612761 KDF1Q8NAX2 398 aaPredicted RBP9.02□□□□□ -0.97
CFDP1-211ENST00000612761 SOBPA7XYQ1 873 aa9.01□□□□□ -0.97
CFDP1-211ENST00000612761 POM121CA8CG34 1229 aa9.01□□□□□ -0.97
CFDP1-211ENST00000612761 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-211ENST00000612761 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-211ENST00000612761 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
CFDP1-211ENST00000612761 DNMT3LQ9UJW3 386 aa9.01□□□□□ -0.97
CFDP1-211ENST00000612761 CHIC2Q9UKJ5 165 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms