RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 CCDC146Q8IYE0 955 aa17.63■□□□□ 0.41
NEAT1-204ENST00000612303 AHDC1Q5TGY3 1603 aaPredicted RBP17.62■□□□□ 0.41
NEAT1-204ENST00000612303 ROBO1Q9Y6N7 1651 aa17.62■□□□□ 0.41
NEAT1-204ENST00000612303 APAF1O14727 1248 aa17.62■□□□□ 0.41
NEAT1-204ENST00000612303 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
NEAT1-204ENST00000612303 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
NEAT1-204ENST00000612303 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
NEAT1-204ENST00000612303 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
NEAT1-204ENST00000612303 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
NEAT1-204ENST00000612303 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
NEAT1-204ENST00000612303 NEFMP07197 916 aa17.58■□□□□ 0.4
NEAT1-204ENST00000612303 ABCC6O95255 1503 aa17.57■□□□□ 0.4
NEAT1-204ENST00000612303 CPDO75976 1380 aa17.57■□□□□ 0.4
NEAT1-204ENST00000612303 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
NEAT1-204ENST00000612303 MAPK8IP3Q9UPT6 1336 aa17.57■□□□□ 0.4
NEAT1-204ENST00000612303 CCDC27Q2M243 656 aa17.57■□□□□ 0.4
NEAT1-204ENST00000612303 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
NEAT1-204ENST00000612303 PRKAR2BP31323 418 aa17.55■□□□□ 0.4
NEAT1-204ENST00000612303 CERKQ8TCT0 537 aa17.55■□□□□ 0.4
NEAT1-204ENST00000612303 PHF23Q9BUL5 403 aaPredicted RBP17.55■□□□□ 0.4
NEAT1-204ENST00000612303 SALL2Q9Y467 1007 aaPredicted RBP17.55■□□□□ 0.4
NEAT1-204ENST00000612303 KDRP35968 1356 aa17.54■□□□□ 0.4
NEAT1-204ENST00000612303 HMOX1P09601 288 aa17.54■□□□□ 0.4
NEAT1-204ENST00000612303 SULT6B1Q6IMI4 303 aa17.54■□□□□ 0.4
NEAT1-204ENST00000612303 EYA1Q99502 592 aa17.54■□□□□ 0.4
NEAT1-204ENST00000612303 COL18A1P39060 1754 aa17.53■□□□□ 0.4
NEAT1-204ENST00000612303 UBAP1LF5GYI3 381 aa17.53■□□□□ 0.4
NEAT1-204ENST00000612303 TMPOP42166 694 aaKnown RBP17.53■□□□□ 0.4
NEAT1-204ENST00000612303 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
NEAT1-204ENST00000612303 CABLES1Q8TDN4 633 aa17.53■□□□□ 0.4
NEAT1-204ENST00000612303 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
NEAT1-204ENST00000612303 GOLGA2Q08379 1002 aa17.52■□□□□ 0.4
NEAT1-204ENST00000612303 WWC1Q8IX03 1113 aa17.52■□□□□ 0.4
NEAT1-204ENST00000612303 PHLPP1O60346 1717 aa17.52■□□□□ 0.39
NEAT1-204ENST00000612303 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
NEAT1-204ENST00000612303 ZBTB7CA1YPR0 619 aa17.51■□□□□ 0.39
NEAT1-204ENST00000612303 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
NEAT1-204ENST00000612303 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
NEAT1-204ENST00000612303 ABCA3Q99758 1704 aa17.51■□□□□ 0.39
NEAT1-204ENST00000612303 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
NEAT1-204ENST00000612303 RGPD5Q99666 1765 aa17.5■□□□□ 0.39
NEAT1-204ENST00000612303 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
NEAT1-204ENST00000612303 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
NEAT1-204ENST00000612303 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
NEAT1-204ENST00000612303 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
NEAT1-204ENST00000612303 AXIN2Q9Y2T1 843 aa17.49■□□□□ 0.39
NEAT1-204ENST00000612303 COL16A1Q07092 1604 aaPredicted RBP17.49■□□□□ 0.39
NEAT1-204ENST00000612303 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
NEAT1-204ENST00000612303 RIPK4P57078 832 aa17.48■□□□□ 0.39
NEAT1-204ENST00000612303 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
NEAT1-204ENST00000612303 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
NEAT1-204ENST00000612303 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
NEAT1-204ENST00000612303 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
NEAT1-204ENST00000612303 NCAPD2Q15021 1401 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 E9PSI1 815 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 NBPF6Q5VWK0 638 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
NEAT1-204ENST00000612303 CDCA7LQ96GN5 454 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 NBPF4Q96M43 638 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 TRIM35Q9UPQ4 493 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 ERBB3P21860 1342 aa17.47■□□□□ 0.39
NEAT1-204ENST00000612303 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
NEAT1-204ENST00000612303 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
NEAT1-204ENST00000612303 IL16Q14005 1332 aa17.46■□□□□ 0.38
NEAT1-204ENST00000612303 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
NEAT1-204ENST00000612303 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
NEAT1-204ENST00000612303 DLG5Q8TDM6 1919 aa17.45■□□□□ 0.38
NEAT1-204ENST00000612303 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
NEAT1-204ENST00000612303 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
NEAT1-204ENST00000612303 CHRNA2Q15822 529 aa17.43■□□□□ 0.38
NEAT1-204ENST00000612303 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
NEAT1-204ENST00000612303 GAS2L2Q8NHY3 880 aa17.43■□□□□ 0.38
NEAT1-204ENST00000612303 PLEKHG2Q9H7P9 1386 aa17.42■□□□□ 0.38
NEAT1-204ENST00000612303 HTATSF1O43719 755 aaKnown RBP17.41■□□□□ 0.38
NEAT1-204ENST00000612303 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
NEAT1-204ENST00000612303 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
NEAT1-204ENST00000612303 MYH16Q9H6N6 1097 aa17.4■□□□□ 0.38
NEAT1-204ENST00000612303 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
NEAT1-204ENST00000612303 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
NEAT1-204ENST00000612303 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
NEAT1-204ENST00000612303 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.37
NEAT1-204ENST00000612303 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
NEAT1-204ENST00000612303 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
NEAT1-204ENST00000612303 WDR17Q8IZU2 1322 aa17.39■□□□□ 0.37
NEAT1-204ENST00000612303 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
NEAT1-204ENST00000612303 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
NEAT1-204ENST00000612303 JCADQ9P266 1359 aa17.37■□□□□ 0.37
NEAT1-204ENST00000612303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.37
NEAT1-204ENST00000612303 EVA1CP58658 441 aa17.35■□□□□ 0.37
NEAT1-204ENST00000612303 GNAI1P63096 354 aa17.35■□□□□ 0.37
NEAT1-204ENST00000612303 RAPGEF4Q8WZA2 1011 aa17.35■□□□□ 0.37
NEAT1-204ENST00000612303 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
NEAT1-204ENST00000612303 RCAN3Q9UKA8 241 aa17.35■□□□□ 0.37
NEAT1-204ENST00000612303 SUPT16HQ9Y5B9 1047 aaKnown RBP17.35■□□□□ 0.37
NEAT1-204ENST00000612303 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
NEAT1-204ENST00000612303 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
NEAT1-204ENST00000612303 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
NEAT1-204ENST00000612303 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms