RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
SYNRG-217ENST00000612223 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
SYNRG-217ENST00000612223 IFT57Q9NWB7 429 aa17.13■□□□□ 0.33
SYNRG-217ENST00000612223 SYNJ2O15056 1496 aa17.13■□□□□ 0.33
SYNRG-217ENST00000612223 NUCB2P80303 420 aa17.13■□□□□ 0.33
SYNRG-217ENST00000612223 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
SYNRG-217ENST00000612223 MNS1Q8NEH6 495 aa17.12■□□□□ 0.33
SYNRG-217ENST00000612223 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
SYNRG-217ENST00000612223 MPRIPQ6WCQ1 1025 aa17.12■□□□□ 0.33
SYNRG-217ENST00000612223 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
SYNRG-217ENST00000612223 STK38Q15208 465 aa17.12■□□□□ 0.33
SYNRG-217ENST00000612223 FILIP1LQ4L180 1135 aa17.12■□□□□ 0.33
SYNRG-217ENST00000612223 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
SYNRG-217ENST00000612223 SMC2O95347 1197 aa17.12■□□□□ 0.33
SYNRG-217ENST00000612223 CCDC97Q96F63 343 aaPredicted RBP17.12■□□□□ 0.33
SYNRG-217ENST00000612223 CEP126Q9P2H0 1117 aa17.11■□□□□ 0.33
SYNRG-217ENST00000612223 IDH1O75874 414 aaKnown RBP17.11■□□□□ 0.33
SYNRG-217ENST00000612223 POLR3DP05423 398 aaPredicted RBP17.11■□□□□ 0.33
SYNRG-217ENST00000612223 AACSQ86V21 672 aa17.11■□□□□ 0.33
SYNRG-217ENST00000612223 RPGRQ92834 1020 aaKnown RBP17.11■□□□□ 0.33
SYNRG-217ENST00000612223 UBAC1Q9BSL1 405 aa17.1■□□□□ 0.33
SYNRG-217ENST00000612223 SEPT11Q9NVA2 429 aaKnown RBP17.1■□□□□ 0.33
SYNRG-217ENST00000612223 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
SYNRG-217ENST00000612223 IGF1RP08069 1367 aa17.1■□□□□ 0.33
SYNRG-217ENST00000612223 ZNF396Q96N95 335 aaPredicted RBP17.09■□□□□ 0.33
SYNRG-217ENST00000612223 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
SYNRG-217ENST00000612223 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
SYNRG-217ENST00000612223 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
SYNRG-217ENST00000612223 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.33
SYNRG-217ENST00000612223 MYO6Q9UM54 1294 aa17.08■□□□□ 0.32
SYNRG-217ENST00000612223 NEFHP12036 1026 aa17.08■□□□□ 0.32
SYNRG-217ENST00000612223 NEK4P51957 841 aa17.08■□□□□ 0.32
SYNRG-217ENST00000612223 CCT4P50991 539 aaKnown RBP17.08■□□□□ 0.32
SYNRG-217ENST00000612223 SMARCE1Q969G3 411 aa17.08■□□□□ 0.32
SYNRG-217ENST00000612223 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
SYNRG-217ENST00000612223 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
SYNRG-217ENST00000612223 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
SYNRG-217ENST00000612223 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
SYNRG-217ENST00000612223 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
SYNRG-217ENST00000612223 NOL7Q9UMY1 257 aaKnown RBP17.06■□□□□ 0.32
SYNRG-217ENST00000612223 ANKRD62A6NC57 917 aa17.06■□□□□ 0.32
SYNRG-217ENST00000612223 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.324e-6■■□□□ 13.5
SYNRG-217ENST00000612223 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
SYNRG-217ENST00000612223 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
SYNRG-217ENST00000612223 NBPF1Q3BBV0 1214 aa17.05■□□□□ 0.32
SYNRG-217ENST00000612223 CUX1P39880 1505 aa17.05■□□□□ 0.32
SYNRG-217ENST00000612223 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
SYNRG-217ENST00000612223 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
SYNRG-217ENST00000612223 MIS18AQ9NYP9 233 aa17.05■□□□□ 0.32
SYNRG-217ENST00000612223 STIM1Q13586 685 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 BMP2KQ9NSY1 1161 aaPredicted RBP17.04■□□□□ 0.32
SYNRG-217ENST00000612223 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 TNIP1Q15025 636 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 DZIP1Q86YF9 867 aaKnown RBP17.04■□□□□ 0.32
SYNRG-217ENST00000612223 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
SYNRG-217ENST00000612223 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 BCAR3O75815 825 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 DEF6Q9H4E7 631 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
SYNRG-217ENST00000612223 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
SYNRG-217ENST00000612223 EXOC5O00471 708 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
SYNRG-217ENST00000612223 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 MINDY4BA8MYZ0 360 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 TEX35Q5T0J7 233 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 DESP17661 470 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 ACBD3Q9H3P7 528 aa17.03■□□□□ 0.32
SYNRG-217ENST00000612223 ZNHIT6Q9NWK9 470 aaKnown RBP17.02■□□□□ 0.32
SYNRG-217ENST00000612223 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
SYNRG-217ENST00000612223 CCDC7Q96M83 1385 aa17.02■□□□□ 0.32
SYNRG-217ENST00000612223 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
SYNRG-217ENST00000612223 PPP4R3AQ6IN85 833 aa17.02■□□□□ 0.31
SYNRG-217ENST00000612223 TRIM5Q9C035 493 aa17.02■□□□□ 0.31
SYNRG-217ENST00000612223 SSR1P43307 286 aaKnown RBP17.02■□□□□ 0.31
SYNRG-217ENST00000612223 CEBPAP49715 358 aaPredicted RBP17.02■□□□□ 0.31
SYNRG-217ENST00000612223 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 MYD88Q99836 296 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 FOXO3O43524 673 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 CA8P35219 290 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 ERBINQ96RT1 1412 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 WAPLQ7Z5K2 1190 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 FIBPO43427 364 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 SEC63Q9UGP8 760 aaKnown RBP17.01■□□□□ 0.31
SYNRG-217ENST00000612223 TSHZ2Q9NRE2 1034 aa17.01■□□□□ 0.31
SYNRG-217ENST00000612223 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
SYNRG-217ENST00000612223 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
SYNRG-217ENST00000612223 FAM13BQ9NYF5 915 aa17■□□□□ 0.31
SYNRG-217ENST00000612223 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
SYNRG-217ENST00000612223 UBAP1LF5GYI3 381 aa17■□□□□ 0.31
SYNRG-217ENST00000612223 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
SYNRG-217ENST00000612223 PDCP20941 246 aa17■□□□□ 0.31
SYNRG-217ENST00000612223 SERPINC1P01008 464 aa16.99■□□□□ 0.31
SYNRG-217ENST00000612223 ME1P48163 572 aa16.99■□□□□ 0.31
SYNRG-217ENST00000612223 NOM1Q5C9Z4 860 aaKnown RBP16.99■□□□□ 0.31
SYNRG-217ENST00000612223 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
SYNRG-217ENST00000612223 ARGLU1Q9NWB6 273 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms