RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 SYNE3Q6ZMZ3 975 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 NOS1P29475 1434 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 NLRP6P59044 892 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 GPS2Q13227 327 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 ANKRD36BQ8N2N9 1353 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 PLEKHH1Q9ULM0 1364 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 CCDC192P0DO97 292 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 CYP46A1Q9Y6A2 500 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 RASSF8Q8NHQ8 419 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 HOMER1Q86YM7 354 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 TRIM5Q9C035 493 aa13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 C14orf93Q9H972 538 aaKnown RBP13.08□□□□□ -0.32
CDC42EP3-206ENST00000611976 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 RIC3Q7Z5B4 369 aa13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 PSME1Q06323 249 aa13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 TRDNQ13061 729 aa13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 TPD52L1Q16890 204 aaPredicted RBP13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 TXNDC2Q86VQ3 553 aa13.07□□□□□ -0.32
CDC42EP3-206ENST00000611976 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
CDC42EP3-206ENST00000611976 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
CDC42EP3-206ENST00000611976 ARGLU1Q9NWB6 273 aaPredicted RBP13.06□□□□□ -0.32
CDC42EP3-206ENST00000611976 FAM69CQ0P6D2 419 aa13.06□□□□□ -0.32
CDC42EP3-206ENST00000611976 TEX35Q5T0J7 233 aa13.06□□□□□ -0.32
CDC42EP3-206ENST00000611976 PCDHB15Q9Y5E8 787 aa13.06□□□□□ -0.32
CDC42EP3-206ENST00000611976 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 UQCRHP07919 91 aa13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 KRT85P78386 507 aa13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 SSFA2P28290 1259 aa13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 NUCB1Q02818 461 aa13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 RBM10P98175 930 aaKnown RBP13.05□□□□□ -0.32
CDC42EP3-206ENST00000611976 RRS1Q15050 365 aaKnown RBP13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 CYB5RLQ6IPT4 315 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 TBC1D9Q6ZT07 1266 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 KDM5BQ9UGL1 1544 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 KDM2BQ8NHM5 1336 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 THUMPD2Q9BTF0 503 aaKnown RBP13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 SYCE3A1L190 88 aa13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 CCAR2Q8N163 923 aaKnown RBP13.04□□□□□ -0.32
CDC42EP3-206ENST00000611976 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 PLCH2O75038 1416 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 MX1P20591 662 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 DHX8Q14562 1220 aaKnown RBP13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 SNX21Q969T3 373 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 ZNF396Q96N95 335 aaPredicted RBP13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 KLHL40Q2TBA0 621 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 RAPGEF4Q8WZA2 1011 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 CCDC61Q9Y6R9 512 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 FANCAO15360 1455 aa13.03□□□□□ -0.32
CDC42EP3-206ENST00000611976 MNS1Q8NEH6 495 aa13.02□□□□□ -0.32
CDC42EP3-206ENST00000611976 PTPRCP08575 1304 aa13.02□□□□□ -0.32
CDC42EP3-206ENST00000611976 A0A0U1RQG5 324 aaPredicted RBP13.02□□□□□ -0.32
CDC42EP3-206ENST00000611976 ANKRD20A12PQ8NF67 263 aa13.02□□□□□ -0.33
CDC42EP3-206ENST00000611976 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
CDC42EP3-206ENST00000611976 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 NUDT16Q96DE0 195 aaKnown RBP13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 PDRG1Q9NUG6 133 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 CCP110O43303 1012 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 RAB11FIP3O75154 756 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 FOSBP53539 338 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 SRGAP3O43295 1099 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 BAG4O95429 457 aaKnown RBP13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 APPP05067 770 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 A2MP01023 1474 aa13.01□□□□□ -0.33
CDC42EP3-206ENST00000611976 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
CDC42EP3-206ENST00000611976 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 OLFM4Q6UX06 510 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 EXOC6BQ9Y2D4 811 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 MCM5P33992 734 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 CLCN1P35523 988 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 SPC24Q8NBT2 197 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13□□□□□ -0.33
CDC42EP3-206ENST00000611976 RAPGEF3O95398 923 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 CCDC70Q6NSX1 233 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 NFXL1Q6ZNB6 911 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 PUS7Q96PZ0 661 aaKnown RBP13□□□□□ -0.33
CDC42EP3-206ENST00000611976 TTC22Q5TAA0 569 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 FBXW7Q969H0 707 aa13□□□□□ -0.33
CDC42EP3-206ENST00000611976 SMARCA5O60264 1052 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms