RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PLA2R1Q13018 1463 aa16.05■□□□□ 0.16
TCF3-220ENST00000611869 PHF8Q9UPP1 1060 aa16.05■□□□□ 0.16
TCF3-220ENST00000611869 AEBP1Q8IUX7 1158 aa16.05■□□□□ 0.16
TCF3-220ENST00000611869 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
TCF3-220ENST00000611869 CLASRPQ8N2M8 674 aaKnown RBP16.05■□□□□ 0.16
TCF3-220ENST00000611869 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
TCF3-220ENST00000611869 PPIP5K1Q6PFW1 1433 aa16.04■□□□□ 0.16
TCF3-220ENST00000611869 KDM5CP41229 1560 aa16.04■□□□□ 0.16
TCF3-220ENST00000611869 ZKSCAN1P17029 563 aaPredicted RBP16.04■□□□□ 0.16
TCF3-220ENST00000611869 CCDC27Q2M243 656 aa16.04■□□□□ 0.16
TCF3-220ENST00000611869 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
TCF3-220ENST00000611869 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
TCF3-220ENST00000611869 RPAP2Q8IXW5 612 aaPredicted RBP16.03■□□□□ 0.16
TCF3-220ENST00000611869 CHD1O14646 1710 aa16.03■□□□□ 0.16
TCF3-220ENST00000611869 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
TCF3-220ENST00000611869 GNL2Q13823 731 aaKnown RBP16.03■□□□□ 0.16
TCF3-220ENST00000611869 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
TCF3-220ENST00000611869 ERC2O15083 957 aa16.03■□□□□ 0.16
TCF3-220ENST00000611869 NEK4P51957 841 aa16.03■□□□□ 0.16
TCF3-220ENST00000611869 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
TCF3-220ENST00000611869 PREX2Q70Z35 1606 aa16.02■□□□□ 0.16
TCF3-220ENST00000611869 LRRCC1Q9C099 1032 aa16.02■□□□□ 0.16
TCF3-220ENST00000611869 IL16Q14005 1332 aa16.02■□□□□ 0.16
TCF3-220ENST00000611869 TATP17735 454 aaPredicted RBP16.02■□□□□ 0.16
TCF3-220ENST00000611869 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.15
TCF3-220ENST00000611869 SKOR2Q2VWA4 1001 aaPredicted RBP16.02■□□□□ 0.15
TCF3-220ENST00000611869 MAGI2Q86UL8 1455 aa16.02■□□□□ 0.15
TCF3-220ENST00000611869 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
TCF3-220ENST00000611869 CDC42BPAQ5VT25 1732 aa16.01■□□□□ 0.15
TCF3-220ENST00000611869 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
TCF3-220ENST00000611869 PTPRTO14522 1441 aa16.01■□□□□ 0.15
TCF3-220ENST00000611869 RNF123Q5XPI4 1314 aa16.01■□□□□ 0.15
TCF3-220ENST00000611869 MCTP1Q6DN14 999 aa16■□□□□ 0.15
TCF3-220ENST00000611869 DRC7Q8IY82 874 aa16■□□□□ 0.15
TCF3-220ENST00000611869 STRN4Q9NRL3 753 aa16■□□□□ 0.15
TCF3-220ENST00000611869 SRGAP3O43295 1099 aa16■□□□□ 0.15
TCF3-220ENST00000611869 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
TCF3-220ENST00000611869 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
TCF3-220ENST00000611869 ZMYM3Q14202 1370 aa16■□□□□ 0.15
TCF3-220ENST00000611869 ABCC1P33527 1531 aa16■□□□□ 0.15
TCF3-220ENST00000611869 MYL6BP14649 208 aa16■□□□□ 0.15
TCF3-220ENST00000611869 NUCB2P80303 420 aa16■□□□□ 0.15
TCF3-220ENST00000611869 MAP4K4O95819 1239 aaPredicted RBP15.99■□□□□ 0.15
TCF3-220ENST00000611869 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
TCF3-220ENST00000611869 RABEP1Q15276 862 aa15.99■□□□□ 0.15
TCF3-220ENST00000611869 TAF7Q15545 349 aaPredicted RBP15.99■□□□□ 0.15
TCF3-220ENST00000611869 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
TCF3-220ENST00000611869 TOMM22Q9NS69 142 aa15.99■□□□□ 0.15
TCF3-220ENST00000611869 EIF4A2Q14240 407 aaKnown RBP15.98■□□□□ 0.15
TCF3-220ENST00000611869 TSPYL6Q8N831 410 aa15.98■□□□□ 0.15
TCF3-220ENST00000611869 CNTROBQ8N137 903 aa15.98■□□□□ 0.15
TCF3-220ENST00000611869 TRAK2O60296 914 aa15.98■□□□□ 0.15
TCF3-220ENST00000611869 SIL1Q9H173 461 aa15.98■□□□□ 0.15
TCF3-220ENST00000611869 YEATS2Q9ULM3 1422 aa15.98■□□□□ 0.15
TCF3-220ENST00000611869 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
TCF3-220ENST00000611869 MPRIPQ6WCQ1 1025 aa15.97■□□□□ 0.15
TCF3-220ENST00000611869 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
TCF3-220ENST00000611869 HTATSF1O43719 755 aaKnown RBP15.97■□□□□ 0.15
TCF3-220ENST00000611869 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
TCF3-220ENST00000611869 DDX54Q8TDD1 881 aaKnown RBP15.96■□□□□ 0.15
TCF3-220ENST00000611869 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.96■□□□□ 0.15
TCF3-220ENST00000611869 KRT24Q2M2I5 525 aa15.96■□□□□ 0.14
TCF3-220ENST00000611869 TOM1L2Q6ZVM7 507 aa15.96■□□□□ 0.14
TCF3-220ENST00000611869 FSD1Q9BTV5 496 aa15.96■□□□□ 0.14
TCF3-220ENST00000611869 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.14
TCF3-220ENST00000611869 ZCCHC11Q5TAX3 1644 aaKnown RBP15.96■□□□□ 0.14
TCF3-220ENST00000611869 VPS37CA5D8V6 355 aaPredicted RBP15.95■□□□□ 0.14
TCF3-220ENST00000611869 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 FAM184AQ8NB25 1140 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 H3BQV1 296 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 IFFO2Q5TF58 517 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 SMC3Q9UQE7 1217 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 ATP6V1DQ9Y5K8 247 aa15.95■□□□□ 0.14
TCF3-220ENST00000611869 FLIIQ13045 1269 aa15.94■□□□□ 0.14
TCF3-220ENST00000611869 C8orf34Q49A92 452 aa15.94■□□□□ 0.14
TCF3-220ENST00000611869 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
TCF3-220ENST00000611869 CABP4P57796 275 aa15.94■□□□□ 0.14
TCF3-220ENST00000611869 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
TCF3-220ENST00000611869 TBC1D2Q9BYX2 928 aa15.93■□□□□ 0.14
TCF3-220ENST00000611869 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
TCF3-220ENST00000611869 VAMP4O75379 141 aa15.93■□□□□ 0.14
TCF3-220ENST00000611869 SPG7Q9UQ90 795 aa15.93■□□□□ 0.14
TCF3-220ENST00000611869 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
TCF3-220ENST00000611869 ADCY10Q96PN6 1610 aa15.92■□□□□ 0.14
TCF3-220ENST00000611869 HDAC1Q13547 482 aaPredicted RBP15.92■□□□□ 0.14
TCF3-220ENST00000611869 BRPF3Q9ULD4 1205 aa15.92■□□□□ 0.14
TCF3-220ENST00000611869 PHF14O94880 888 aa15.92■□□□□ 0.14
TCF3-220ENST00000611869 MRPL50Q8N5N7 158 aaKnown RBP15.92■□□□□ 0.14
TCF3-220ENST00000611869 LRRFIP2Q9Y608 721 aaKnown RBP15.92■□□□□ 0.14
TCF3-220ENST00000611869 TRPM2O94759 1503 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 KIAA2012Q0VF49 1180 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 DNAJC2Q99543 621 aaKnown RBP15.91■□□□□ 0.14
TCF3-220ENST00000611869 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 NEO1Q92859 1461 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 GOLGA6L6A8MZA4 724 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 ANXA1P04083 346 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 MEIS3Q99687 375 aa15.91■□□□□ 0.14
TCF3-220ENST00000611869 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms