RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 GRM5P41594 1212 aa12.13□□□□□ -0.47
LINC00343-211ENST00000608426 HPS1Q92902 700 aa12.13□□□□□ -0.47
LINC00343-211ENST00000608426 NR5A1Q13285 461 aa12.12□□□□□ -0.47
LINC00343-211ENST00000608426 ZNF592Q92610 1267 aa12.12□□□□□ -0.47
LINC00343-211ENST00000608426 A6NJR5 290 aa12.11□□□□□ -0.47
LINC00343-211ENST00000608426 RAB15P59190 212 aa12.11□□□□□ -0.47
LINC00343-211ENST00000608426 MCCD1P59942 119 aaPredicted RBP12.11□□□□□ -0.47
LINC00343-211ENST00000608426 NR3C2P08235 984 aa12.1□□□□□ -0.47
LINC00343-211ENST00000608426 INTS6LQ5JSJ4 861 aaKnown RBP12.08□□□□□ -0.48
LINC00343-211ENST00000608426 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
LINC00343-211ENST00000608426 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
LINC00343-211ENST00000608426 AVPP01185 164 aa12.07□□□□□ -0.48
LINC00343-211ENST00000608426 SEMA3FQ13275 785 aa12.07□□□□□ -0.48
LINC00343-211ENST00000608426 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
LINC00343-211ENST00000608426 POM121CA8CG34 1229 aa12.06□□□□□ -0.48
LINC00343-211ENST00000608426 SOX11P35716 441 aa12.06□□□□□ -0.48
LINC00343-211ENST00000608426 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
LINC00343-211ENST00000608426 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
LINC00343-211ENST00000608426 MYT1Q01538 1121 aa12.05□□□□□ -0.48
LINC00343-211ENST00000608426 CEP126Q9P2H0 1117 aa12.05□□□□□ -0.48
LINC00343-211ENST00000608426 ESPNB1AK53 854 aa12.04□□□□□ -0.48
LINC00343-211ENST00000608426 DHX9Q08211 1270 aaKnown RBP12.04□□□□□ -0.48
LINC00343-211ENST00000608426 PPP1R26Q5T8A7 1209 aaPredicted RBP12.04□□□□□ -0.48
LINC00343-211ENST00000608426 ZMYND15Q9H091 742 aa12.04□□□□□ -0.48
LINC00343-211ENST00000608426 AXIN1O15169 862 aa12.03□□□□□ -0.48
LINC00343-211ENST00000608426 ZIC2O95409 532 aaPredicted RBP12.03□□□□□ -0.48
LINC00343-211ENST00000608426 CTC1Q2NKJ3 1217 aa12.03□□□□□ -0.48
LINC00343-211ENST00000608426 SEPT12Q8IYM1 358 aa12.03□□□□□ -0.48
LINC00343-211ENST00000608426 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
LINC00343-211ENST00000608426 ST8SIA5O15466 376 aa12.02□□□□□ -0.49
LINC00343-211ENST00000608426 CAPN5O15484 640 aaPredicted RBP12.02□□□□□ -0.49
LINC00343-211ENST00000608426 TIMP2P16035 220 aa12.02□□□□□ -0.49
LINC00343-211ENST00000608426 RNF20Q5VTR2 975 aa12.02□□□□□ -0.49
LINC00343-211ENST00000608426 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
LINC00343-211ENST00000608426 ITPKCQ96DU7 683 aa12.02□□□□□ -0.49
LINC00343-211ENST00000608426 ERVH48-1M5A8F1 160 aa12.01□□□□□ -0.49
LINC00343-211ENST00000608426 TRAK2O60296 914 aa12.01□□□□□ -0.49
LINC00343-211ENST00000608426 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
LINC00343-211ENST00000608426 PGPEP1Q9NXJ5 209 aa12.01□□□□□ -0.49
LINC00343-211ENST00000608426 SLFNL1Q499Z3 407 aa12□□□□□ -0.49
LINC00343-211ENST00000608426 KLF16Q9BXK1 252 aaPredicted RBP12□□□□□ -0.49
LINC00343-211ENST00000608426 ALG2Q9H553 416 aa12□□□□□ -0.49
LINC00343-211ENST00000608426 AAASQ9NRG9 546 aa12□□□□□ -0.49
LINC00343-211ENST00000608426 TMPRSS4Q9NRS4 437 aa12□□□□□ -0.49
LINC00343-211ENST00000608426 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
LINC00343-211ENST00000608426 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
LINC00343-211ENST00000608426 CRIPAKQ8N1N5 446 aa11.99□□□□□ -0.49
LINC00343-211ENST00000608426 LCE2BO14633 110 aa11.98□□□□□ -0.49
LINC00343-211ENST00000608426 RNF135Q8IUD6 432 aa11.98□□□□□ -0.49
LINC00343-211ENST00000608426 ZNF784Q8NCA9 323 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-211ENST00000608426 ADAMTS19Q8TE59 1207 aa11.97□□□□□ -0.49
LINC00343-211ENST00000608426 GLMNQ92990 594 aa11.97□□□□□ -0.49
LINC00343-211ENST00000608426 ZNF777Q9ULD5 760 aaPredicted RBP11.97□□□□□ -0.49
LINC00343-211ENST00000608426 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
LINC00343-211ENST00000608426 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
LINC00343-211ENST00000608426 CCDC85AQ96PX6 553 aaPredicted RBP11.95□□□□□ -0.5
LINC00343-211ENST00000608426 CYLDQ9NQC7 956 aa11.95□□□□□ -0.5
LINC00343-211ENST00000608426 CBLBQ13191 982 aa11.94□□□□□ -0.5
LINC00343-211ENST00000608426 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
LINC00343-211ENST00000608426 DACH1Q9UI36 760 aa11.94□□□□□ -0.5
LINC00343-211ENST00000608426 PIK3CDO00329 1044 aa11.93□□□□□ -0.5
LINC00343-211ENST00000608426 TRIM52Q96A61 297 aa11.93□□□□□ -0.5
LINC00343-211ENST00000608426 CALR3Q96L12 384 aaKnown RBP11.93□□□□□ -0.5
LINC00343-211ENST00000608426 BMP1P13497 986 aa11.92□□□□□ -0.5
LINC00343-211ENST00000608426 ERICH6Q7L0X2 663 aa11.92□□□□□ -0.5
LINC00343-211ENST00000608426 DOLKQ9UPQ8 538 aa11.92□□□□□ -0.5
LINC00343-211ENST00000608426 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
LINC00343-211ENST00000608426 LILRA1O75019 489 aa11.9□□□□□ -0.5
LINC00343-211ENST00000608426 SKIP12755 728 aa11.9□□□□□ -0.5
LINC00343-211ENST00000608426 MEIOBQ8N635 442 aa11.9□□□□□ -0.5
LINC00343-211ENST00000608426 CDCA7Q9BWT1 371 aaPredicted RBP11.9□□□□□ -0.5
LINC00343-211ENST00000608426 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
LINC00343-211ENST00000608426 ATP13A2Q9NQ11 1180 aa11.9□□□□□ -0.5
LINC00343-211ENST00000608426 OXLD1Q5BKU9 147 aa11.89□□□□□ -0.51
LINC00343-211ENST00000608426 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
LINC00343-211ENST00000608426 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
LINC00343-211ENST00000608426 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
LINC00343-211ENST00000608426 UPP2O95045 317 aa11.88□□□□□ -0.51
LINC00343-211ENST00000608426 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
LINC00343-211ENST00000608426 SCTRP47872 440 aa11.88□□□□□ -0.51
LINC00343-211ENST00000608426 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
LINC00343-211ENST00000608426 Q6ZVU0 165 aa11.88□□□□□ -0.51
LINC00343-211ENST00000608426 TRIM46Q7Z4K8 759 aa11.88□□□□□ -0.51
LINC00343-211ENST00000608426 UCN2Q96RP3 112 aa11.88□□□□□ -0.51
LINC00343-211ENST00000608426 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
LINC00343-211ENST00000608426 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
LINC00343-211ENST00000608426 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
LINC00343-211ENST00000608426 MYCP01106 439 aaPredicted RBP11.86□□□□□ -0.51
LINC00343-211ENST00000608426 SCARF1Q14162 830 aa11.86□□□□□ -0.51
LINC00343-211ENST00000608426 MAP7D1Q3KQU3 841 aa11.86□□□□□ -0.51
LINC00343-211ENST00000608426 C6orf118Q5T5N4 469 aa11.86□□□□□ -0.51
LINC00343-211ENST00000608426 LINC00528Q8N1L1 170 aa11.86□□□□□ -0.51
LINC00343-211ENST00000608426 ADH1AP07327 375 aa11.85□□□□□ -0.51
LINC00343-211ENST00000608426 RELBQ01201 579 aa11.85□□□□□ -0.51
LINC00343-211ENST00000608426 TBC1D9Q6ZT07 1266 aa11.85□□□□□ -0.51
LINC00343-211ENST00000608426 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
LINC00343-211ENST00000608426 PURBQ96QR8 312 aaKnown RBP11.85□□□□□ -0.51
LINC00343-211ENST00000608426 TSEN34Q9BSV6 310 aaKnown RBP11.85□□□□□ -0.51
LINC00343-211ENST00000608426 BMP2P12643 396 aa11.84□□□□□ -0.51
LINC00343-211ENST00000608426 USP4Q13107 963 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms