RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 KCNH5Q8NCM2 988 aa20.21■□□□□ 0.83
HDDC2-204ENST00000608295 PUS7Q96PZ0 661 aaKnown RBP20.21■□□□□ 0.83
HDDC2-204ENST00000608295 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
HDDC2-204ENST00000608295 EIF4G2P78344 907 aaKnown RBP eCLIP20.2■□□□□ 0.822e-6■■■□□ 14.8
HDDC2-204ENST00000608295 AXIN2Q9Y2T1 843 aa20.2■□□□□ 0.82
HDDC2-204ENST00000608295 USP31Q70CQ4 1352 aa20.2■□□□□ 0.82
HDDC2-204ENST00000608295 ARHGEF25Q86VW2 580 aa20.19■□□□□ 0.82
HDDC2-204ENST00000608295 SLC24A1O60721 1099 aa20.18■□□□□ 0.82
HDDC2-204ENST00000608295 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
HDDC2-204ENST00000608295 CRB1P82279 1406 aa20.18■□□□□ 0.82
HDDC2-204ENST00000608295 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
HDDC2-204ENST00000608295 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
HDDC2-204ENST00000608295 GGNBP2Q9H3C7 697 aa20.17■□□□□ 0.82
HDDC2-204ENST00000608295 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
HDDC2-204ENST00000608295 ONECUT3O60422 494 aaPredicted RBP20.16■□□□□ 0.82
HDDC2-204ENST00000608295 LRRC37A3O60309 1634 aa20.16■□□□□ 0.82
HDDC2-204ENST00000608295 FBLN1P23142 703 aa20.15■□□□□ 0.82
HDDC2-204ENST00000608295 TCP11L2Q8N4U5 519 aa20.15■□□□□ 0.82
HDDC2-204ENST00000608295 PARP4Q9UKK3 1724 aaKnown RBP20.14■□□□□ 0.81
HDDC2-204ENST00000608295 COG3Q96JB2 828 aa20.14■□□□□ 0.81
HDDC2-204ENST00000608295 WDR17Q8IZU2 1322 aa20.13■□□□□ 0.81
HDDC2-204ENST00000608295 BLMP54132 1417 aaPredicted RBP20.12■□□□□ 0.81
HDDC2-204ENST00000608295 ABCC6O95255 1503 aa20.12■□□□□ 0.81
HDDC2-204ENST00000608295 RGPD1P0DJD0 1748 aa20.11■□□□□ 0.81
HDDC2-204ENST00000608295 TNS1Q9HBL0 1735 aaKnown RBP20.11■□□□□ 0.81
HDDC2-204ENST00000608295 DEFB132Q7Z7B7 95 aa20.11■□□□□ 0.81
HDDC2-204ENST00000608295 LTV1Q96GA3 475 aaPredicted RBP20.11■□□□□ 0.81
HDDC2-204ENST00000608295 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
HDDC2-204ENST00000608295 CARD14Q9BXL6 1004 aa20.1■□□□□ 0.81
HDDC2-204ENST00000608295 RGPD2P0DJD1 1756 aa20.1■□□□□ 0.81
HDDC2-204ENST00000608295 SF3B2Q13435 895 aaKnown RBP20.09■□□□□ 0.81
HDDC2-204ENST00000608295 MAP3K19Q56UN5 1328 aa20.08■□□□□ 0.81
HDDC2-204ENST00000608295 FYB1O15117 783 aa20.08■□□□□ 0.81
HDDC2-204ENST00000608295 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
HDDC2-204ENST00000608295 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
HDDC2-204ENST00000608295 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
HDDC2-204ENST00000608295 NLRP2Q9NX02 1062 aa20.07■□□□□ 0.8
HDDC2-204ENST00000608295 ERBB3P21860 1342 aa20.06■□□□□ 0.8
HDDC2-204ENST00000608295 C11orf95C9JLR9 678 aaPredicted RBP20.06■□□□□ 0.8
HDDC2-204ENST00000608295 PEAK1Q9H792 1746 aa20.06■□□□□ 0.8
HDDC2-204ENST00000608295 THRAP3Q9Y2W1 955 aaKnown RBP20.06■□□□□ 0.8
HDDC2-204ENST00000608295 AMPHP49418 695 aa20.05■□□□□ 0.8
HDDC2-204ENST00000608295 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
HDDC2-204ENST00000608295 FAM208AQ9UK61 1670 aaKnown RBP20.04■□□□□ 0.8
HDDC2-204ENST00000608295 TRIM37O94972 964 aa20.03■□□□□ 0.8
HDDC2-204ENST00000608295 CARD10Q9BWT7 1032 aa20.03■□□□□ 0.8
HDDC2-204ENST00000608295 HOXC9P31274 260 aa20.02■□□□□ 0.8
HDDC2-204ENST00000608295 DDB1Q16531 1140 aa20.02■□□□□ 0.8
HDDC2-204ENST00000608295 CCDC125Q86Z20 511 aa20.02■□□□□ 0.8
HDDC2-204ENST00000608295 DISP2A7MBM2 1401 aa20.02■□□□□ 0.79
HDDC2-204ENST00000608295 CCDC7Q96M83 1385 aa20.01■□□□□ 0.79
HDDC2-204ENST00000608295 IP6K1Q92551 441 aa20.01■□□□□ 0.79
HDDC2-204ENST00000608295 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
HDDC2-204ENST00000608295 OVOS2A0A0G2JMS6 1433 aa20■□□□□ 0.79
HDDC2-204ENST00000608295 SBF2Q86WG5 1849 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 BAG6P46379 1132 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 EN1Q05925 392 aaPredicted RBP19.99■□□□□ 0.79
HDDC2-204ENST00000608295 FAM196AQ6ZSG2 479 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 PANK3Q9H999 370 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 TNS2Q63HR2 1409 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 CGNL1Q0VF96 1302 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 KIF7Q2M1P5 1343 aa19.99■□□□□ 0.79
HDDC2-204ENST00000608295 MAP2P11137 1827 aaKnown RBP19.98■□□□□ 0.79
HDDC2-204ENST00000608295 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
HDDC2-204ENST00000608295 USHBP1Q8N6Y0 703 aa19.98■□□□□ 0.79
HDDC2-204ENST00000608295 EMILIN1Q9Y6C2 1016 aa19.98■□□□□ 0.79
HDDC2-204ENST00000608295 RTL1A6NKG5 1358 aa19.97■□□□□ 0.79
HDDC2-204ENST00000608295 MARCH10Q8NA82 808 aaPredicted RBP19.95■□□□□ 0.78
HDDC2-204ENST00000608295 SMG6Q86US8 1419 aaKnown RBP19.94■□□□□ 0.78
HDDC2-204ENST00000608295 APBA3O96018 575 aa19.94■□□□□ 0.78
HDDC2-204ENST00000608295 IL2RBP14784 551 aa19.94■□□□□ 0.78
HDDC2-204ENST00000608295 FLT4P35916 1363 aa19.94■□□□□ 0.78
HDDC2-204ENST00000608295 CNGB1Q14028 1251 aaPredicted RBP19.93■□□□□ 0.78
HDDC2-204ENST00000608295 EZH2Q15910 746 aaKnown RBP19.93■□□□□ 0.78
HDDC2-204ENST00000608295 HSP90AB2PQ58FF8 381 aa19.93■□□□□ 0.78
HDDC2-204ENST00000608295 CDCA7Q9BWT1 371 aaPredicted RBP19.93■□□□□ 0.78
HDDC2-204ENST00000608295 KAT6BQ8WYB5 2073 aa19.93■□□□□ 0.78
HDDC2-204ENST00000608295 MEGF6O75095 1541 aa19.92■□□□□ 0.78
HDDC2-204ENST00000608295 EXOC5O00471 708 aa19.92■□□□□ 0.78
HDDC2-204ENST00000608295 PTF1AQ7RTS3 328 aa19.92■□□□□ 0.78
HDDC2-204ENST00000608295 SHANK3Q9BYB0 1731 aa19.91■□□□□ 0.78
HDDC2-204ENST00000608295 NUP188Q5SRE5 1749 aa19.9■□□□□ 0.78
HDDC2-204ENST00000608295 PSDA5PKW4 1024 aaPredicted RBP19.9■□□□□ 0.78
HDDC2-204ENST00000608295 ACSBG1Q96GR2 724 aa19.9■□□□□ 0.78
HDDC2-204ENST00000608295 RREB1Q92766 1687 aa19.9■□□□□ 0.78
HDDC2-204ENST00000608295 INSRP06213 1382 aa19.89■□□□□ 0.77
HDDC2-204ENST00000608295 NBPF6Q5VWK0 638 aa19.89■□□□□ 0.77
HDDC2-204ENST00000608295 NBPF4Q96M43 638 aa19.89■□□□□ 0.77
HDDC2-204ENST00000608295 DOT1LQ8TEK3 1739 aa19.88■□□□□ 0.77
HDDC2-204ENST00000608295 NHSQ6T4R5 1651 aa19.88■□□□□ 0.77
HDDC2-204ENST00000608295 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
HDDC2-204ENST00000608295 KNSTRNQ9Y448 316 aa19.87■□□□□ 0.77
HDDC2-204ENST00000608295 WASHC2AQ641Q2 1341 aa19.86■□□□□ 0.77
HDDC2-204ENST00000608295 MORC1Q86VD1 984 aa19.85■□□□□ 0.77
HDDC2-204ENST00000608295 BTAF1O14981 1849 aa19.85■□□□□ 0.77
HDDC2-204ENST00000608295 KCNQ2O43526 872 aa19.84■□□□□ 0.77
HDDC2-204ENST00000608295 CAMKK2Q96RR4 588 aa19.84■□□□□ 0.77
HDDC2-204ENST00000608295 POLKQ9UBT6 870 aa19.84■□□□□ 0.77
HDDC2-204ENST00000608295 NSD2O96028 1365 aa19.83■□□□□ 0.77
HDDC2-204ENST00000608295 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms