RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
CDC40-207ENST00000606893 AXIN2Q9Y2T1 843 aa8.95□□□□□ -0.98
CDC40-207ENST00000606893 THUMPD2Q9BTF0 503 aaKnown RBP8.95□□□□□ -0.98
CDC40-207ENST00000606893 FOXD4L1Q9NU39 408 aa8.95□□□□□ -0.98
CDC40-207ENST00000606893 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
CDC40-207ENST00000606893 UTRNP46939 3433 aa8.94□□□□□ -0.98
CDC40-207ENST00000606893 PHF23Q9BUL5 403 aaPredicted RBP8.94□□□□□ -0.98
CDC40-207ENST00000606893 LRRC7Q96NW7 1537 aa8.94□□□□□ -0.98
CDC40-207ENST00000606893 DCTN1Q14203 1278 aa8.94□□□□□ -0.98
CDC40-207ENST00000606893 SULT6B1Q6IMI4 303 aa8.94□□□□□ -0.98
CDC40-207ENST00000606893 MAP3K19Q56UN5 1328 aa8.93□□□□□ -0.98
CDC40-207ENST00000606893 C1orf167Q5SNV9 1468 aa8.93□□□□□ -0.98
CDC40-207ENST00000606893 NRXN1Q9ULB1 1477 aa8.93□□□□□ -0.98
CDC40-207ENST00000606893 POLKQ9UBT6 870 aa8.93□□□□□ -0.98
CDC40-207ENST00000606893 NINLQ9Y2I6 1382 aa8.93□□□□□ -0.98
CDC40-207ENST00000606893 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.93□□□□□ -0.98
CDC40-207ENST00000606893 RGPD8O14715 1765 aaPredicted RBP8.93□□□□□ -0.98
CDC40-207ENST00000606893 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
CDC40-207ENST00000606893 GLIPR1L2Q4G1C9 344 aa8.92□□□□□ -0.98
CDC40-207ENST00000606893 ILDR1Q86SU0 546 aaPredicted RBP8.92□□□□□ -0.98
CDC40-207ENST00000606893 MIS18AQ9NYP9 233 aa8.92□□□□□ -0.98
CDC40-207ENST00000606893 PLEKHG3A1L390 1219 aa8.91□□□□□ -0.98
CDC40-207ENST00000606893 FAM83GA6ND36 823 aa8.91□□□□□ -0.98
CDC40-207ENST00000606893 NECTIN2Q92692 538 aa8.91□□□□□ -0.98
CDC40-207ENST00000606893 BRD4O60885 1362 aaPredicted RBP8.91□□□□□ -0.98
CDC40-207ENST00000606893 MED14O60244 1454 aa8.91□□□□□ -0.98
CDC40-207ENST00000606893 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
CDC40-207ENST00000606893 SETBP1Q9Y6X0 1596 aa8.91□□□□□ -0.98
CDC40-207ENST00000606893 KIAA0232Q92628 1395 aa8.9□□□□□ -0.98
CDC40-207ENST00000606893 PIK3R4Q99570 1358 aa8.9□□□□□ -0.98
CDC40-207ENST00000606893 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
CDC40-207ENST00000606893 NKTRP30414 1462 aaKnown RBP8.9□□□□□ -0.98
CDC40-207ENST00000606893 STRCP1A6NGW2 1772 aa8.9□□□□□ -0.98
CDC40-207ENST00000606893 DIAPH1O60610 1272 aaKnown RBP8.9□□□□□ -0.98
CDC40-207ENST00000606893 PRKAR2BP31323 418 aa8.9□□□□□ -0.99
CDC40-207ENST00000606893 TSR2Q969E8 191 aaKnown RBP8.9□□□□□ -0.99
CDC40-207ENST00000606893 ZNF330Q9Y3S2 320 aaPredicted RBP8.9□□□□□ -0.99
CDC40-207ENST00000606893 FAM135BQ49AJ0 1406 aa8.9□□□□□ -0.99
CDC40-207ENST00000606893 DIP2AQ14689 1571 aa8.9□□□□□ -0.99
CDC40-207ENST00000606893 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
CDC40-207ENST00000606893 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
CDC40-207ENST00000606893 MAPK8IP3Q9UPT6 1336 aa8.89□□□□□ -0.99
CDC40-207ENST00000606893 IFT172Q9UG01 1749 aa8.89□□□□□ -0.99
CDC40-207ENST00000606893 ANKRD24Q8TF21 1146 aa8.89□□□□□ -0.99
CDC40-207ENST00000606893 ATP7BP35670 1465 aa8.89□□□□□ -0.99
CDC40-207ENST00000606893 CPS1P31327 1500 aa8.89□□□□□ -0.99
CDC40-207ENST00000606893 MST1RQ04912 1400 aa8.89□□□□□ -0.99
CDC40-207ENST00000606893 RBM10P98175 930 aaKnown RBP8.89□□□□□ -0.99
CDC40-207ENST00000606893 ARHGEF28Q8N1W1 1705 aaKnown RBP8.89□□□□□ -0.99
CDC40-207ENST00000606893 ACSBG1Q96GR2 724 aa8.88□□□□□ -0.99
CDC40-207ENST00000606893 POLR1AO95602 1720 aaPredicted RBP8.88□□□□□ -0.99
CDC40-207ENST00000606893 KCNQ4P56696 695 aa8.88□□□□□ -0.99
CDC40-207ENST00000606893 PDE4CQ08493 712 aa8.88□□□□□ -0.99
CDC40-207ENST00000606893 NBPF6Q5VWK0 638 aa8.88□□□□□ -0.99
CDC40-207ENST00000606893 NBPF4Q96M43 638 aa8.88□□□□□ -0.99
CDC40-207ENST00000606893 GOLGA2Q08379 1002 aa8.87□□□□□ -0.99
CDC40-207ENST00000606893 EIF4A2Q14240 407 aaKnown RBP8.87□□□□□ -0.99
CDC40-207ENST00000606893 PHACTR3Q96KR7 559 aa8.87□□□□□ -0.99
CDC40-207ENST00000606893 SPATA31A3Q5VYP0 1347 aa8.87□□□□□ -0.99
CDC40-207ENST00000606893 USP6P35125 1406 aa8.87□□□□□ -0.99
CDC40-207ENST00000606893 FRAT2O75474 233 aaPredicted RBP8.87□□□□□ -0.99
CDC40-207ENST00000606893 MCM10Q7L590 875 aa8.87□□□□□ -0.99
CDC40-207ENST00000606893 HOXC9P31274 260 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 PTCH1Q13635 1447 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 MPRIPQ6WCQ1 1025 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 EYA1Q99502 592 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 RSPH6AQ9H0K4 717 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 USP21Q9UK80 565 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 NSD2O96028 1365 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 NGEFQ8N5V2 710 aa8.86□□□□□ -0.99
CDC40-207ENST00000606893 KIAA1210Q9ULL0 1709 aa8.85□□□□□ -0.99
CDC40-207ENST00000606893 LAMC1P11047 1609 aa8.85□□□□□ -0.99
CDC40-207ENST00000606893 PARD3Q8TEW0 1356 aa8.85□□□□□ -0.99
CDC40-207ENST00000606893 SEC24BO95487 1268 aa8.85□□□□□ -0.99
CDC40-207ENST00000606893 BCL11BQ9C0K0 894 aaPredicted RBP8.85□□□□□ -0.99
CDC40-207ENST00000606893 CHD2O14647 1828 aaKnown RBP8.85□□□□□ -0.99
CDC40-207ENST00000606893 ZNF142P52746 1687 aaPredicted RBP8.85□□□□□ -0.99
CDC40-207ENST00000606893 NPC1L1Q9UHC9 1359 aa8.85□□□□□ -0.99
CDC40-207ENST00000606893 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
CDC40-207ENST00000606893 RAPGEF4Q8WZA2 1011 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 C1orf115Q9H7X2 142 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 NALCNQ8IZF0 1738 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 TECPR2O15040 1411 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 IGHDP01880 384 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 PIP4K2AP48426 406 aaPredicted RBP8.84□□□□□ -0.99
CDC40-207ENST00000606893 FGD1P98174 961 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 AAMPQ13685 434 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 TCP11L2Q8N4U5 519 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 RIPK4P57078 832 aa8.84□□□□□ -0.99
CDC40-207ENST00000606893 FTSJ3Q8IY81 847 aaKnown RBP8.83□□□□□ -1
CDC40-207ENST00000606893 KCNH5Q8NCM2 988 aa8.83□□□□□ -1
CDC40-207ENST00000606893 BACH2Q9BYV9 841 aa8.83□□□□□ -1
CDC40-207ENST00000606893 QTRT2Q9H974 415 aaKnown RBP8.83□□□□□ -1
CDC40-207ENST00000606893 KDM5AP29375 1690 aaKnown RBP8.83□□□□□ -1
CDC40-207ENST00000606893 CD163L1Q9NR16 1453 aa8.83□□□□□ -1
CDC40-207ENST00000606893 TTC21AQ8NDW8 1320 aa8.83□□□□□ -1
CDC40-207ENST00000606893 PTCD1O75127 700 aaKnown RBP8.82□□□□□ -1
CDC40-207ENST00000606893 AFF2P51816 1311 aa8.82□□□□□ -1
CDC40-207ENST00000606893 ARHGEF25Q86VW2 580 aa8.82□□□□□ -1
CDC40-207ENST00000606893 ITPRIPQ8IWB1 547 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms