RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 NEFMP07197 916 aa16.16■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 TRMT2AQ8IZ69 625 aaKnown RBP16.16■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 E9PSI1 815 aa16.15■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 NEFLP07196 543 aa16.15■□□□□ 0.18
NEDD8-MDP1-203ENST00000604306 COL18A1P39060 1754 aa16.14■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 WWC1Q8IX03 1113 aa16.14■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 IL16Q14005 1332 aa16.14■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 AHDC1Q5TGY3 1603 aaPredicted RBP16.13■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 EIF4A2Q14240 407 aaKnown RBP16.13■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 NCAPD2Q15021 1401 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 LMO7Q8WWI1 1683 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 FBLN1P23142 703 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 AMPHP49418 695 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 BRINP3Q76B58 766 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 SLAIN2Q9P270 581 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 RGPD5Q99666 1765 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 HOXC9P31274 260 aa16.11■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 TMPOP42166 694 aaKnown RBP16.11■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 IP6K1Q92551 441 aa16.11■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 COL22A1Q8NFW1 1626 aaPredicted RBP16.1■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 PRKAR2BP31323 418 aa16.1■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 ROBO1Q9Y6N7 1651 aa16.1■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 SPATA31A3Q5VYP0 1347 aa16.1■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 GCP02774 474 aa16.09■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 SUPT16HQ9Y5B9 1047 aaKnown RBP16.09■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 CPDO75976 1380 aa16.09■□□□□ 0.17
NEDD8-MDP1-203ENST00000604306 CALD1Q05682 793 aaKnown RBP16.08■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 NFE2L2Q16236 605 aa16.08■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 ARHGEF25Q86VW2 580 aa16.08■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 SALL2Q9Y467 1007 aaPredicted RBP16.08■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 LRRC37A3O60309 1634 aa16.08■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 RCAN3Q9UKA8 241 aa16.07■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 CT47B1P0C2W7 299 aaPredicted RBP16.06■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 RIPK4P57078 832 aa16.04■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 HMOX1P09601 288 aa16.03■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 SULT6B1Q6IMI4 303 aa16.03■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 SOX12O15370 315 aa16.02■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 EYA1Q99502 592 aa16.02■□□□□ 0.16
NEDD8-MDP1-203ENST00000604306 RRP7AQ9Y3A4 280 aaKnown RBP16.01■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 PHLPP1O60346 1717 aa16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 HTATSF1O43719 755 aaKnown RBP16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 FKBP8Q14318 412 aa16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 NEUROD2Q15784 382 aa16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 GAS2L2Q8NHY3 880 aa16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 CACNA1FO60840 1977 aa16■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 COL16A1Q07092 1604 aaPredicted RBP15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 PARP4Q9UKK3 1724 aaKnown RBP15.99■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 OVOS2A0A0G2JMS6 1433 aa15.98■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 AEBP1Q8IUX7 1158 aa15.98■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 IFT57Q9NWB7 429 aa15.98■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 COL14A1Q05707 1796 aaKnown RBP15.98■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 ERBB3P21860 1342 aa15.97■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 FANCIQ9NVI1 1328 aa15.96■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 GNAI1P63096 354 aa15.96■□□□□ 0.15
NEDD8-MDP1-203ENST00000604306 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 DDX17Q92841 729 aaKnown RBP15.95■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 ANKRD24Q8TF21 1146 aa15.94■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 SCN11AQ9UI33 1791 aa15.94■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 MAP3K5Q99683 1374 aa15.93■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 LRRC59Q96AG4 307 aaKnown RBP15.93■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 BABAM1Q9NWV8 329 aa15.93■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 KDM3BQ7LBC6 1761 aa15.92■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 WNK3Q9BYP7 1800 aa15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 TOM1O60784 492 aa15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 HAP1P54257 671 aaPredicted RBP15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
NEDD8-MDP1-203ENST00000604306 PPP4R2Q9NY27 417 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms