RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 NUDCQ9Y266 331 aa23■■□□□ 1.27
PPFIA3-207ENST00000602716 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
PPFIA3-207ENST00000602716 APAF1O14727 1248 aa22.99■■□□□ 1.27
PPFIA3-207ENST00000602716 KCNH5Q8NCM2 988 aa22.98■■□□□ 1.27
PPFIA3-207ENST00000602716 ARHGEF10O15013 1369 aa22.98■■□□□ 1.27
PPFIA3-207ENST00000602716 AHDC1Q5TGY3 1603 aaPredicted RBP22.98■■□□□ 1.27
PPFIA3-207ENST00000602716 HMOX1P09601 288 aa22.98■■□□□ 1.27
PPFIA3-207ENST00000602716 RGPD1P0DJD0 1748 aa22.97■■□□□ 1.27
PPFIA3-207ENST00000602716 RTL1A6NKG5 1358 aa22.97■■□□□ 1.27
PPFIA3-207ENST00000602716 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
PPFIA3-207ENST00000602716 ARHGEF25Q86VW2 580 aa22.96■■□□□ 1.27
PPFIA3-207ENST00000602716 ZC3H6P61129 1189 aaKnown RBP22.95■■□□□ 1.26
PPFIA3-207ENST00000602716 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
PPFIA3-207ENST00000602716 RSPH6AQ9H0K4 717 aa22.95■■□□□ 1.26
PPFIA3-207ENST00000602716 KIF24Q5T7B8 1368 aa22.94■■□□□ 1.26
PPFIA3-207ENST00000602716 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
PPFIA3-207ENST00000602716 RRP7AQ9Y3A4 280 aaKnown RBP22.94■■□□□ 1.26
PPFIA3-207ENST00000602716 PIP4K2BP78356 416 aa22.94■■□□□ 1.26
PPFIA3-207ENST00000602716 ABCA3Q99758 1704 aa22.93■■□□□ 1.26
PPFIA3-207ENST00000602716 LTV1Q96GA3 475 aaPredicted RBP22.92■■□□□ 1.26
PPFIA3-207ENST00000602716 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
PPFIA3-207ENST00000602716 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
PPFIA3-207ENST00000602716 IP6K1Q92551 441 aa22.92■■□□□ 1.26
PPFIA3-207ENST00000602716 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
PPFIA3-207ENST00000602716 AXIN2Q9Y2T1 843 aa22.9■■□□□ 1.26
PPFIA3-207ENST00000602716 ZNF521Q96K83 1311 aa22.9■■□□□ 1.26
PPFIA3-207ENST00000602716 COL16A1Q07092 1604 aaPredicted RBP22.89■■□□□ 1.26
PPFIA3-207ENST00000602716 TOM1O60784 492 aa22.89■■□□□ 1.25
PPFIA3-207ENST00000602716 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
PPFIA3-207ENST00000602716 KIAA0232Q92628 1395 aa22.89■■□□□ 1.25
PPFIA3-207ENST00000602716 SULT6B1Q6IMI4 303 aa22.88■■□□□ 1.25
PPFIA3-207ENST00000602716 CDCA7LQ96GN5 454 aa22.88■■□□□ 1.25
PPFIA3-207ENST00000602716 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
PPFIA3-207ENST00000602716 EYA1Q99502 592 aa22.88■■□□□ 1.25
PPFIA3-207ENST00000602716 IGSF1Q8N6C5 1336 aa22.88■■□□□ 1.25
PPFIA3-207ENST00000602716 FCHSD2O94868 740 aa22.87■■□□□ 1.25
PPFIA3-207ENST00000602716 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
PPFIA3-207ENST00000602716 PHLPP1O60346 1717 aa22.86■■□□□ 1.25
PPFIA3-207ENST00000602716 COL18A1P39060 1754 aa22.86■■□□□ 1.25
PPFIA3-207ENST00000602716 CERKQ8TCT0 537 aa22.86■■□□□ 1.25
PPFIA3-207ENST00000602716 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
PPFIA3-207ENST00000602716 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
PPFIA3-207ENST00000602716 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
PPFIA3-207ENST00000602716 CPDO75976 1380 aa22.84■■□□□ 1.25
PPFIA3-207ENST00000602716 RGPD5Q99666 1765 aa22.84■■□□□ 1.25
PPFIA3-207ENST00000602716 KDRP35968 1356 aa22.83■■□□□ 1.25
PPFIA3-207ENST00000602716 TMPOP42166 694 aaKnown RBP22.82■■□□□ 1.24
PPFIA3-207ENST00000602716 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
PPFIA3-207ENST00000602716 ANKRD24Q8TF21 1146 aa22.82■■□□□ 1.24
PPFIA3-207ENST00000602716 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
PPFIA3-207ENST00000602716 SPINK5Q9NQ38 1064 aaPredicted RBP22.82■■□□□ 1.24
PPFIA3-207ENST00000602716 NBPF6Q5VWK0 638 aa22.81■■□□□ 1.24
PPFIA3-207ENST00000602716 WWC1Q8IX03 1113 aa22.81■■□□□ 1.24
PPFIA3-207ENST00000602716 NBPF4Q96M43 638 aa22.81■■□□□ 1.24
PPFIA3-207ENST00000602716 COL22A1Q8NFW1 1626 aaPredicted RBP22.81■■□□□ 1.24
PPFIA3-207ENST00000602716 ERBB3P21860 1342 aa22.8■■□□□ 1.24
PPFIA3-207ENST00000602716 LMO7Q8WWI1 1683 aa22.79■■□□□ 1.24
PPFIA3-207ENST00000602716 HAP1P54257 671 aaPredicted RBP22.79■■□□□ 1.24
PPFIA3-207ENST00000602716 TRIM35Q9UPQ4 493 aa22.79■■□□□ 1.24
PPFIA3-207ENST00000602716 ABCC6O95255 1503 aa22.78■■□□□ 1.24
PPFIA3-207ENST00000602716 CAMTA1Q9Y6Y1 1673 aa22.78■■□□□ 1.24
PPFIA3-207ENST00000602716 PRDM11Q9NQV5 511 aa22.77■■□□□ 1.24
PPFIA3-207ENST00000602716 PNNQ9H307 717 aaKnown RBP22.77■■□□□ 1.24
PPFIA3-207ENST00000602716 NCAPD2Q15021 1401 aa22.77■■□□□ 1.23
PPFIA3-207ENST00000602716 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
PPFIA3-207ENST00000602716 RIPK4P57078 832 aa22.75■■□□□ 1.23
PPFIA3-207ENST00000602716 PDE3BQ13370 1112 aa22.75■■□□□ 1.23
PPFIA3-207ENST00000602716 GOLGA2Q08379 1002 aa22.74■■□□□ 1.23
PPFIA3-207ENST00000602716 CCDC27Q2M243 656 aa22.74■■□□□ 1.23
PPFIA3-207ENST00000602716 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
PPFIA3-207ENST00000602716 FAM208AQ9UK61 1670 aaKnown RBP22.73■■□□□ 1.23
PPFIA3-207ENST00000602716 THUMPD2Q9BTF0 503 aaKnown RBP22.72■■□□□ 1.23
PPFIA3-207ENST00000602716 COL5A2P05997 1499 aaPredicted RBP22.72■■□□□ 1.23
PPFIA3-207ENST00000602716 FAM83GA6ND36 823 aa22.72■■□□□ 1.23
PPFIA3-207ENST00000602716 NEFMP07197 916 aa22.72■■□□□ 1.23
PPFIA3-207ENST00000602716 SLFN5Q08AF3 891 aa22.72■■□□□ 1.23
PPFIA3-207ENST00000602716 DUSP27Q5VZP5 1158 aa22.72■■□□□ 1.23
PPFIA3-207ENST00000602716 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
PPFIA3-207ENST00000602716 DLG5Q8TDM6 1919 aa22.7■■□□□ 1.22
PPFIA3-207ENST00000602716 NCBP3Q53F19 620 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-207ENST00000602716 ERICH6BQ5W0A0 696 aa22.69■■□□□ 1.22
PPFIA3-207ENST00000602716 TRMT2AQ8IZ69 625 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-207ENST00000602716 NLRP2Q9NX02 1062 aa22.69■■□□□ 1.22
PPFIA3-207ENST00000602716 CSB-PGBD3P0DP91 1061 aa22.68■■□□□ 1.22
PPFIA3-207ENST00000602716 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
PPFIA3-207ENST00000602716 MEGF6O75095 1541 aa22.66■■□□□ 1.22
PPFIA3-207ENST00000602716 WDR63Q8IWG1 891 aa22.66■■□□□ 1.22
PPFIA3-207ENST00000602716 RBM19Q9Y4C8 960 aaKnown RBP22.66■■□□□ 1.22
PPFIA3-207ENST00000602716 E9PSI1 815 aa22.65■■□□□ 1.22
PPFIA3-207ENST00000602716 NUTM2BA6NNL0 878 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-207ENST00000602716 NUTM2EB1AL46 878 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-207ENST00000602716 IRX6P78412 446 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-207ENST00000602716 NUTM2AQ8IVF1 878 aaPredicted RBP22.65■■□□□ 1.22
PPFIA3-207ENST00000602716 ADAMTS2O95450 1211 aa22.64■■□□□ 1.22
PPFIA3-207ENST00000602716 WDR17Q8IZU2 1322 aa22.64■■□□□ 1.22
PPFIA3-207ENST00000602716 COL14A1Q05707 1796 aaKnown RBP22.64■■□□□ 1.21
PPFIA3-207ENST00000602716 STRN4Q9NRL3 753 aa22.64■■□□□ 1.21
PPFIA3-207ENST00000602716 MCM10Q7L590 875 aa22.63■■□□□ 1.21
PPFIA3-207ENST00000602716 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
PPFIA3-207ENST00000602716 LARP1Q6PKG0 1096 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms