RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 TMF1P82094 1093 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 TNNT3P45378 269 aaPredicted RBP9.5□□□□□ -0.89
KDM1A-206ENST00000602503 TERF2Q15554 542 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 MORC2Q9Y6X9 1032 aaPredicted RBP9.5□□□□□ -0.89
KDM1A-206ENST00000602503 UVSSAQ2YD98 709 aa9.49□□□□□ -0.89
KDM1A-206ENST00000602503 TESK2Q96S53 571 aa9.49□□□□□ -0.89
KDM1A-206ENST00000602503 E9PSI1 815 aa9.49□□□□□ -0.89
KDM1A-206ENST00000602503 CAPN15O75808 1086 aa9.49□□□□□ -0.89
KDM1A-206ENST00000602503 PSEN1P49768 467 aa9.49□□□□□ -0.89
KDM1A-206ENST00000602503 FAM184AQ8NB25 1140 aa9.49□□□□□ -0.89
KDM1A-206ENST00000602503 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
KDM1A-206ENST00000602503 TRIM34Q9BYJ4 488 aa9.48□□□□□ -0.89
KDM1A-206ENST00000602503 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
KDM1A-206ENST00000602503 MYOM2P54296 1465 aa9.48□□□□□ -0.89
KDM1A-206ENST00000602503 SCAF11Q99590 1463 aaKnown RBP9.48□□□□□ -0.89
KDM1A-206ENST00000602503 U2AF2P26368 475 aaKnown RBP eCLIP9.48□□□□□ -0.893e-7■■■□□ 17.4
KDM1A-206ENST00000602503 MLECQ14165 292 aa9.48□□□□□ -0.89
KDM1A-206ENST00000602503 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
KDM1A-206ENST00000602503 DDX41Q9UJV9 622 aaKnown RBP9.48□□□□□ -0.89
KDM1A-206ENST00000602503 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
KDM1A-206ENST00000602503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.48□□□□□ -0.89
KDM1A-206ENST00000602503 PLEKHH1Q9ULM0 1364 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 CD109Q6YHK3 1445 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
KDM1A-206ENST00000602503 MBD3O95983 291 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 WDR43Q15061 677 aaKnown RBP eCLIP9.47□□□□□ -0.89
KDM1A-206ENST00000602503 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
KDM1A-206ENST00000602503 FANCAO15360 1455 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 YEATS2Q9ULM3 1422 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 PRIM1P49642 420 aaKnown RBP9.47□□□□□ -0.89
KDM1A-206ENST00000602503 CC2D1BQ5T0F9 858 aaKnown RBP9.47□□□□□ -0.89
KDM1A-206ENST00000602503 KRT222Q8N1A0 295 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 SPAG9O60271 1321 aaKnown RBP9.47□□□□□ -0.89
KDM1A-206ENST00000602503 MYO3AQ8NEV4 1616 aa9.47□□□□□ -0.89
KDM1A-206ENST00000602503 RGL3Q3MIN7 710 aa9.46□□□□□ -0.89
KDM1A-206ENST00000602503 CEP120Q8N960 986 aa9.46□□□□□ -0.89
KDM1A-206ENST00000602503 SYAP1Q96A49 352 aaPredicted RBP9.46□□□□□ -0.89
KDM1A-206ENST00000602503 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.89
KDM1A-206ENST00000602503 KDM5AP29375 1690 aaKnown RBP9.46□□□□□ -0.89
KDM1A-206ENST00000602503 IFT172Q9UG01 1749 aa9.46□□□□□ -0.89
KDM1A-206ENST00000602503 LMTK2Q8IWU2 1503 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 PHF14O94880 888 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 GGT6Q6P531 493 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 CTNNA3Q9UI47 895 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 CLTCL1P53675 1640 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 KANK1Q14678 1352 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 PIK3C2GO75747 1445 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 ATP7AQ04656 1500 aa9.46□□□□□ -0.9
KDM1A-206ENST00000602503 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.9
KDM1A-206ENST00000602503 DISP3Q9P2K9 1392 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 KIF3BO15066 747 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 LMBRD1Q9NUN5 540 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 KIF16BQ96L93 1317 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 CFAP74Q9C0B2 1584 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 KIF1BO60333 1816 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 GOLGA6L6A8MZA4 724 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 CAPN2P17655 700 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 MYCBPQ99417 103 aaPredicted RBP9.45□□□□□ -0.9
KDM1A-206ENST00000602503 ADGRL1O94910 1474 aa9.45□□□□□ -0.9
KDM1A-206ENST00000602503 ASXL1Q8IXJ9 1541 aa9.44□□□□□ -0.9
KDM1A-206ENST00000602503 MYOM1P52179 1685 aa9.44□□□□□ -0.9
KDM1A-206ENST00000602503 FEZ2Q9UHY8 353 aaPredicted RBP9.44□□□□□ -0.9
KDM1A-206ENST00000602503 MAP3K4Q9Y6R4 1608 aa9.44□□□□□ -0.9
KDM1A-206ENST00000602503 SETBP1Q9Y6X0 1596 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 RAD50Q92878 1312 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 SSFA2P28290 1259 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 SBNO2Q9Y2G9 1366 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 TSPY26PQ9H489 355 aa9.43□□□□□ -0.9
KDM1A-206ENST00000602503 IGSF3O75054 1194 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 RASSF4Q9H2L5 321 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 RIOK3O14730 519 aaKnown RBP9.42□□□□□ -0.9
KDM1A-206ENST00000602503 SOX12O15370 315 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 GTF2A1P52655 376 aaPredicted RBP9.42□□□□□ -0.9
KDM1A-206ENST00000602503 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 NRXN1Q9ULB1 1477 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 MROH1Q8NDA8 1641 aa9.42□□□□□ -0.9
KDM1A-206ENST00000602503 LMOD3Q0VAK6 560 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 REC8O95072 547 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 KIF18AQ8NI77 898 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 TSC1Q92574 1164 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 PAXBP1Q9Y5B6 917 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 BCAR3O75815 825 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
KDM1A-206ENST00000602503 SMC4Q9NTJ3 1288 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 COG6Q9Y2V7 657 aa9.41□□□□□ -0.9
KDM1A-206ENST00000602503 SMTNL1A8MU46 457 aa9.4□□□□□ -0.9
KDM1A-206ENST00000602503 CFAP65Q6ZU64 1925 aaKnown RBP9.4□□□□□ -0.9
KDM1A-206ENST00000602503 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.91
KDM1A-206ENST00000602503 MUM1L1Q5H9M0 696 aa9.4□□□□□ -0.91
KDM1A-206ENST00000602503 RNF20Q5VTR2 975 aa9.4□□□□□ -0.91
KDM1A-206ENST00000602503 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 CYP2C19P33261 490 aa9.39□□□□□ -0.91
KDM1A-206ENST00000602503 NCBP1Q09161 790 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms