RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 FBLN1P23142 703 aa19.05■□□□□ 0.64
ZNF548-212ENST00000602086 U2AF1Q01081 240 aaKnown RBP eCLIP19.05■□□□□ 0.64
ZNF548-212ENST00000602086 TNS3Q68CZ2 1445 aa19.05■□□□□ 0.64
ZNF548-212ENST00000602086 FCHSD2O94868 740 aa19.04■□□□□ 0.64
ZNF548-212ENST00000602086 ARHGEF10O15013 1369 aa19.04■□□□□ 0.64
ZNF548-212ENST00000602086 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
ZNF548-212ENST00000602086 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
ZNF548-212ENST00000602086 DDX17Q92841 729 aaKnown RBP19.03■□□□□ 0.64
ZNF548-212ENST00000602086 SPATA31A3Q5VYP0 1347 aa19.02■□□□□ 0.64
ZNF548-212ENST00000602086 LTN1O94822 1766 aa19.02■□□□□ 0.64
ZNF548-212ENST00000602086 PPM1GO15355 546 aaPredicted RBP19.02■□□□□ 0.64
ZNF548-212ENST00000602086 RGPD1P0DJD0 1748 aa19.02■□□□□ 0.63
ZNF548-212ENST00000602086 UPF1Q92900 1129 aaKnown RBP eCLIP19.01■□□□□ 0.63
ZNF548-212ENST00000602086 PLEKHF1Q96S99 279 aa19.01■□□□□ 0.63
ZNF548-212ENST00000602086 ZNF521Q96K83 1311 aa19■□□□□ 0.63
ZNF548-212ENST00000602086 U2SURPO15042 1029 aaKnown RBP19■□□□□ 0.63
ZNF548-212ENST00000602086 CRYBG1Q9Y4K1 1723 aa19■□□□□ 0.63
ZNF548-212ENST00000602086 ABCC6O95255 1503 aa19■□□□□ 0.63
ZNF548-212ENST00000602086 AFF2P51816 1311 aa19■□□□□ 0.63
ZNF548-212ENST00000602086 APAF1O14727 1248 aa18.99■□□□□ 0.63
ZNF548-212ENST00000602086 GCP02774 474 aa18.99■□□□□ 0.63
ZNF548-212ENST00000602086 AMPHP49418 695 aa18.99■□□□□ 0.63
ZNF548-212ENST00000602086 XPCQ01831 940 aaPredicted RBP18.99■□□□□ 0.63
ZNF548-212ENST00000602086 EIF4A2Q14240 407 aaKnown RBP18.99■□□□□ 0.63
ZNF548-212ENST00000602086 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
ZNF548-212ENST00000602086 NUTM2GQ5VZR2 741 aa18.99■□□□□ 0.63
ZNF548-212ENST00000602086 HOXC9P31274 260 aa18.98■□□□□ 0.63
ZNF548-212ENST00000602086 CCDC146Q8IYE0 955 aa18.98■□□□□ 0.63
ZNF548-212ENST00000602086 IP6K1Q92551 441 aa18.98■□□□□ 0.63
ZNF548-212ENST00000602086 RXRBP28702 533 aa18.97■□□□□ 0.63
ZNF548-212ENST00000602086 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
ZNF548-212ENST00000602086 ARHGEF25Q86VW2 580 aa18.97■□□□□ 0.63
ZNF548-212ENST00000602086 RSPH6AQ9H0K4 717 aa18.97■□□□□ 0.63
ZNF548-212ENST00000602086 RGS12O14924 1447 aa18.97■□□□□ 0.63
ZNF548-212ENST00000602086 TCP11L2Q8N4U5 519 aa18.96■□□□□ 0.63
ZNF548-212ENST00000602086 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
ZNF548-212ENST00000602086 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
ZNF548-212ENST00000602086 SOX12O15370 315 aa18.94■□□□□ 0.62
ZNF548-212ENST00000602086 KDRP35968 1356 aa18.93■□□□□ 0.62
ZNF548-212ENST00000602086 NEFMP07197 916 aa18.93■□□□□ 0.62
ZNF548-212ENST00000602086 LMOD2Q6P5Q4 547 aa18.93■□□□□ 0.62
ZNF548-212ENST00000602086 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
ZNF548-212ENST00000602086 CPDO75976 1380 aa18.93■□□□□ 0.62
ZNF548-212ENST00000602086 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
ZNF548-212ENST00000602086 WDR63Q8IWG1 891 aa18.91■□□□□ 0.62
ZNF548-212ENST00000602086 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
ZNF548-212ENST00000602086 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
ZNF548-212ENST00000602086 WWC1Q8IX03 1113 aa18.9■□□□□ 0.62
ZNF548-212ENST00000602086 COL18A1P39060 1754 aa18.89■□□□□ 0.61
ZNF548-212ENST00000602086 ADAMTS2O95450 1211 aa18.89■□□□□ 0.61
ZNF548-212ENST00000602086 TRMT2AQ8IZ69 625 aaKnown RBP18.89■□□□□ 0.61
ZNF548-212ENST00000602086 LRRC59Q96AG4 307 aaKnown RBP18.89■□□□□ 0.61
ZNF548-212ENST00000602086 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
ZNF548-212ENST00000602086 NCAPD2Q15021 1401 aa18.89■□□□□ 0.61
ZNF548-212ENST00000602086 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
ZNF548-212ENST00000602086 EYA1Q99502 592 aa18.88■□□□□ 0.61
ZNF548-212ENST00000602086 CAMTA1Q9Y6Y1 1673 aa18.88■□□□□ 0.61
ZNF548-212ENST00000602086 E9PSI1 815 aa18.87■□□□□ 0.61
ZNF548-212ENST00000602086 HMOX1P09601 288 aa18.87■□□□□ 0.61
ZNF548-212ENST00000602086 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
ZNF548-212ENST00000602086 NFE2L2Q16236 605 aa18.87■□□□□ 0.61
ZNF548-212ENST00000602086 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
ZNF548-212ENST00000602086 COL22A1Q8NFW1 1626 aaPredicted RBP18.87■□□□□ 0.61
ZNF548-212ENST00000602086 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
ZNF548-212ENST00000602086 IL16Q14005 1332 aa18.85■□□□□ 0.61
ZNF548-212ENST00000602086 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
ZNF548-212ENST00000602086 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
ZNF548-212ENST00000602086 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
ZNF548-212ENST00000602086 CDCA7LQ96GN5 454 aa18.84■□□□□ 0.61
ZNF548-212ENST00000602086 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.61
ZNF548-212ENST00000602086 SENP3-EIF4A1A0A087X0R7 540 aa18.83■□□□□ 0.6
ZNF548-212ENST00000602086 RIPK4P57078 832 aa18.83■□□□□ 0.6
ZNF548-212ENST00000602086 DUSP27Q5VZP5 1158 aa18.83■□□□□ 0.6
ZNF548-212ENST00000602086 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
ZNF548-212ENST00000602086 TRIM35Q9UPQ4 493 aa18.83■□□□□ 0.6
ZNF548-212ENST00000602086 DLG5Q8TDM6 1919 aa18.82■□□□□ 0.6
ZNF548-212ENST00000602086 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
ZNF548-212ENST00000602086 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
ZNF548-212ENST00000602086 NGLY1Q96IV0 654 aa18.82■□□□□ 0.6
ZNF548-212ENST00000602086 RRP7AQ9Y3A4 280 aaKnown RBP18.82■□□□□ 0.6
ZNF548-212ENST00000602086 RGPD5Q99666 1765 aa18.81■□□□□ 0.6
ZNF548-212ENST00000602086 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
ZNF548-212ENST00000602086 ERBB3P21860 1342 aa18.8■□□□□ 0.6
ZNF548-212ENST00000602086 ZC3H6P61129 1189 aaKnown RBP18.8■□□□□ 0.6
ZNF548-212ENST00000602086 NEUROD2Q15784 382 aa18.8■□□□□ 0.6
ZNF548-212ENST00000602086 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
ZNF548-212ENST00000602086 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
ZNF548-212ENST00000602086 CABLES1Q8TDN4 633 aa18.79■□□□□ 0.6
ZNF548-212ENST00000602086 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
ZNF548-212ENST00000602086 AXIN2Q9Y2T1 843 aa18.79■□□□□ 0.6
ZNF548-212ENST00000602086 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
ZNF548-212ENST00000602086 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
ZNF548-212ENST00000602086 GAS2L2Q8NHY3 880 aa18.78■□□□□ 0.6
ZNF548-212ENST00000602086 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
ZNF548-212ENST00000602086 HTATSF1O43719 755 aaKnown RBP18.77■□□□□ 0.6
ZNF548-212ENST00000602086 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
ZNF548-212ENST00000602086 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
ZNF548-212ENST00000602086 USP21Q9UK80 565 aa18.77■□□□□ 0.6
ZNF548-212ENST00000602086 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
ZNF548-212ENST00000602086 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms