RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 CRB1P82279 1406 aa21.56■■□□□ 1.04
XRCC1-206ENST00000597811 TCP11L2Q8N4U5 519 aa21.56■■□□□ 1.04
XRCC1-206ENST00000597811 KCNH5Q8NCM2 988 aa21.56■■□□□ 1.04
XRCC1-206ENST00000597811 ZRANB1Q9UGI0 708 aa21.56■■□□□ 1.04
XRCC1-206ENST00000597811 EIF4G2P78344 907 aaKnown RBP eCLIP21.55■■□□□ 1.04
XRCC1-206ENST00000597811 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
XRCC1-206ENST00000597811 ARHGEF25Q86VW2 580 aa21.55■■□□□ 1.04
XRCC1-206ENST00000597811 AXIN2Q9Y2T1 843 aa21.55■■□□□ 1.04
XRCC1-206ENST00000597811 USP31Q70CQ4 1352 aa21.55■■□□□ 1.04
XRCC1-206ENST00000597811 EDC4Q6P2E9 1401 aaKnown RBP21.55■■□□□ 1.04
XRCC1-206ENST00000597811 NME9Q86XW9 330 aa21.54■■□□□ 1.04
XRCC1-206ENST00000597811 THRAP3Q9Y2W1 955 aaKnown RBP21.54■■□□□ 1.04
XRCC1-206ENST00000597811 LRRC37A3O60309 1634 aa21.52■■□□□ 1.04
XRCC1-206ENST00000597811 ABCC6O95255 1503 aa21.52■■□□□ 1.04
XRCC1-206ENST00000597811 TERF2IPQ9NYB0 399 aa21.52■■□□□ 1.04
XRCC1-206ENST00000597811 NINLQ9Y2I6 1382 aa21.51■■□□□ 1.03
XRCC1-206ENST00000597811 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
XRCC1-206ENST00000597811 POLR3GLQ9BT43 218 aa21.51■■□□□ 1.03
XRCC1-206ENST00000597811 WDR17Q8IZU2 1322 aa21.51■■□□□ 1.03
XRCC1-206ENST00000597811 OVOS2A0A0J9YW53 1432 aa21.49■■□□□ 1.03
XRCC1-206ENST00000597811 OVOS2Q6IE36 1432 aa21.49■■□□□ 1.03
XRCC1-206ENST00000597811 HSPA5P11021 654 aaKnown RBP21.49■■□□□ 1.03
XRCC1-206ENST00000597811 BAG6P46379 1132 aa21.49■■□□□ 1.03
XRCC1-206ENST00000597811 PDE3BQ13370 1112 aa21.49■■□□□ 1.03
XRCC1-206ENST00000597811 TOM1L2Q6ZVM7 507 aa21.49■■□□□ 1.03
XRCC1-206ENST00000597811 FAM196AQ6ZSG2 479 aa21.48■■□□□ 1.03
XRCC1-206ENST00000597811 PEAK1Q9H792 1746 aa21.48■■□□□ 1.03
XRCC1-206ENST00000597811 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
XRCC1-206ENST00000597811 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
XRCC1-206ENST00000597811 TRIM37O94972 964 aa21.46■■□□□ 1.03
XRCC1-206ENST00000597811 EN1Q05925 392 aaPredicted RBP21.46■■□□□ 1.03
XRCC1-206ENST00000597811 MYOM1P52179 1685 aa21.45■■□□□ 1.02
XRCC1-206ENST00000597811 ANKRD36BQ8N2N9 1353 aa21.44■■□□□ 1.02
XRCC1-206ENST00000597811 CSB-PGBD3P0DP91 1061 aa21.43■■□□□ 1.02
XRCC1-206ENST00000597811 CARD10Q9BWT7 1032 aa21.42■■□□□ 1.02
XRCC1-206ENST00000597811 KIF20BQ96Q89 1820 aa21.41■■□□□ 1.02
XRCC1-206ENST00000597811 RREB1Q92766 1687 aa21.41■■□□□ 1.02
XRCC1-206ENST00000597811 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
XRCC1-206ENST00000597811 ERBB3P21860 1342 aa21.4■■□□□ 1.02
XRCC1-206ENST00000597811 DDB1Q16531 1140 aa21.4■■□□□ 1.02
XRCC1-206ENST00000597811 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
XRCC1-206ENST00000597811 CCDC7Q96M83 1385 aa21.38■■□□□ 1.01
XRCC1-206ENST00000597811 NUP188Q5SRE5 1749 aa21.38■■□□□ 1.01
XRCC1-206ENST00000597811 FAM208AQ9UK61 1670 aaKnown RBP21.37■■□□□ 1.01
XRCC1-206ENST00000597811 APBA3O96018 575 aa21.37■■□□□ 1.01
XRCC1-206ENST00000597811 CAMKK2Q96RR4 588 aa21.37■■□□□ 1.01
XRCC1-206ENST00000597811 CDCA7Q9BWT1 371 aaPredicted RBP21.37■■□□□ 1.01
XRCC1-206ENST00000597811 COG3Q96JB2 828 aa21.36■■□□□ 1.01
XRCC1-206ENST00000597811 RGPD2P0DJD1 1756 aa21.36■■□□□ 1.01
XRCC1-206ENST00000597811 ANKRD24Q8TF21 1146 aa21.35■■□□□ 1.01
XRCC1-206ENST00000597811 RGPD3A6NKT7 1758 aaPredicted RBP21.34■■□□□ 1.01
XRCC1-206ENST00000597811 RGPD4Q7Z3J3 1758 aa21.34■■□□□ 1.01
XRCC1-206ENST00000597811 PSDA5PKW4 1024 aaPredicted RBP21.34■■□□□ 1.01
XRCC1-206ENST00000597811 MARCH10Q8NA82 808 aaPredicted RBP21.34■■□□□ 1.01
XRCC1-206ENST00000597811 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
XRCC1-206ENST00000597811 TNS2Q63HR2 1409 aa21.33■■□□□ 1.01
XRCC1-206ENST00000597811 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
XRCC1-206ENST00000597811 FBLN1P23142 703 aa21.33■■□□□ 1.01
XRCC1-206ENST00000597811 IP6K1Q92551 441 aa21.33■■□□□ 1.01
XRCC1-206ENST00000597811 NLRP2Q9NX02 1062 aa21.33■■□□□ 1.01
XRCC1-206ENST00000597811 MAP3K19Q56UN5 1328 aa21.32■■□□□ 1
XRCC1-206ENST00000597811 FYB1O15117 783 aa21.32■■□□□ 1
XRCC1-206ENST00000597811 GGNBP2Q9H3C7 697 aa21.32■■□□□ 1
XRCC1-206ENST00000597811 BCL9O00512 1426 aa21.31■■□□□ 1
XRCC1-206ENST00000597811 LRP5O75197 1615 aa21.31■■□□□ 1
XRCC1-206ENST00000597811 EXOC5O00471 708 aa21.3■■□□□ 1
XRCC1-206ENST00000597811 KAT6BQ8WYB5 2073 aa21.3■■□□□ 1
XRCC1-206ENST00000597811 PTF1AQ7RTS3 328 aa21.29■■□□□ 1
XRCC1-206ENST00000597811 HOXC9P31274 260 aa21.28■■□□□ 1
XRCC1-206ENST00000597811 R3HDM1Q15032 1099 aaKnown RBP21.28■■□□□ 1
XRCC1-206ENST00000597811 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
XRCC1-206ENST00000597811 CARD14Q9BXL6 1004 aa21.28■■□□□ 1
XRCC1-206ENST00000597811 NSD3Q9BZ95 1437 aa21.28■■□□□ 1
XRCC1-206ENST00000597811 IL2RBP14784 551 aa21.27■■□□□ 1
XRCC1-206ENST00000597811 RRS1Q15050 365 aaKnown RBP21.27■■□□□ 1
XRCC1-206ENST00000597811 NHSQ6T4R5 1651 aa21.27■■□□□ 1
XRCC1-206ENST00000597811 AMPHP49418 695 aa21.26■□□□□ 0.99
XRCC1-206ENST00000597811 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
XRCC1-206ENST00000597811 BCL11BQ9C0K0 894 aaPredicted RBP21.25■□□□□ 0.99
XRCC1-206ENST00000597811 SHANK3Q9BYB0 1731 aa21.24■□□□□ 0.99
XRCC1-206ENST00000597811 MAP2P11137 1827 aaKnown RBP21.22■□□□□ 0.99
XRCC1-206ENST00000597811 ANKRD26Q9UPS8 1709 aa21.22■□□□□ 0.99
XRCC1-206ENST00000597811 PLSCR1O15162 318 aa21.22■□□□□ 0.99
XRCC1-206ENST00000597811 PANK3Q9H999 370 aa21.22■□□□□ 0.99
XRCC1-206ENST00000597811 BTAF1O14981 1849 aa21.21■□□□□ 0.99
XRCC1-206ENST00000597811 KIF7Q2M1P5 1343 aa21.21■□□□□ 0.99
XRCC1-206ENST00000597811 KCNQ2O43526 872 aa21.19■□□□□ 0.98
XRCC1-206ENST00000597811 CGNL1Q0VF96 1302 aa21.19■□□□□ 0.98
XRCC1-206ENST00000597811 MEGF6O75095 1541 aa21.19■□□□□ 0.98
XRCC1-206ENST00000597811 NBPF14Q5TI25 921 aa21.18■□□□□ 0.98
XRCC1-206ENST00000597811 ACSBG1Q96GR2 724 aa21.18■□□□□ 0.98
XRCC1-206ENST00000597811 FLT4P35916 1363 aa21.17■□□□□ 0.98
XRCC1-206ENST00000597811 DOT1LQ8TEK3 1739 aa21.17■□□□□ 0.98
XRCC1-206ENST00000597811 SMG6Q86US8 1419 aaKnown RBP21.16■□□□□ 0.98
XRCC1-206ENST00000597811 INSRP06213 1382 aa21.16■□□□□ 0.98
XRCC1-206ENST00000597811 KIF24Q5T7B8 1368 aa21.16■□□□□ 0.98
XRCC1-206ENST00000597811 HSP90AB2PQ58FF8 381 aa21.16■□□□□ 0.98
XRCC1-206ENST00000597811 NBPF6Q5VWK0 638 aa21.16■□□□□ 0.98
XRCC1-206ENST00000597811 PROM2Q8N271 834 aa21.16■□□□□ 0.98
XRCC1-206ENST00000597811 NBPF4Q96M43 638 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms