RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
SNRPA-202ENST00000596860 HOXC9P31274 260 aa11.74□□□□□ -0.53
SNRPA-202ENST00000596860 AMPHP49418 695 aa11.74□□□□□ -0.53
SNRPA-202ENST00000596860 RRS1Q15050 365 aaKnown RBP11.74□□□□□ -0.53
SNRPA-202ENST00000596860 POTEAQ6S8J7 498 aa11.74□□□□□ -0.53
SNRPA-202ENST00000596860 EMILIN1Q9Y6C2 1016 aa11.74□□□□□ -0.53
SNRPA-202ENST00000596860 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
SNRPA-202ENST00000596860 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
SNRPA-202ENST00000596860 NCAPD2Q15021 1401 aa11.73□□□□□ -0.53
SNRPA-202ENST00000596860 KIAA0232Q92628 1395 aa11.72□□□□□ -0.53
SNRPA-202ENST00000596860 IL13P35225 146 aa11.72□□□□□ -0.53
SNRPA-202ENST00000596860 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
SNRPA-202ENST00000596860 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
SNRPA-202ENST00000596860 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
SNRPA-202ENST00000596860 CCDC184Q52MB2 194 aa11.71□□□□□ -0.53
SNRPA-202ENST00000596860 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
SNRPA-202ENST00000596860 ZNF772Q68DY9 489 aaPredicted RBP11.71□□□□□ -0.53
SNRPA-202ENST00000596860 KDRP35968 1356 aa11.7□□□□□ -0.54
SNRPA-202ENST00000596860 ERBB3P21860 1342 aa11.7□□□□□ -0.54
SNRPA-202ENST00000596860 FBLN1P23142 703 aa11.7□□□□□ -0.54
SNRPA-202ENST00000596860 WDR43Q15061 677 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNRPA-202ENST00000596860 HSP90AB2PQ58FF8 381 aa11.7□□□□□ -0.54
SNRPA-202ENST00000596860 NGEFQ8N5V2 710 aa11.7□□□□□ -0.54
SNRPA-202ENST00000596860 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
SNRPA-202ENST00000596860 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
SNRPA-202ENST00000596860 PLCH1Q4KWH8 1693 aa11.69□□□□□ -0.54
SNRPA-202ENST00000596860 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
SNRPA-202ENST00000596860 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
SNRPA-202ENST00000596860 FCHSD2O94868 740 aa11.69□□□□□ -0.54
SNRPA-202ENST00000596860 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
SNRPA-202ENST00000596860 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
SNRPA-202ENST00000596860 COL5A2P05997 1499 aaPredicted RBP11.69□□□□□ -0.54
SNRPA-202ENST00000596860 SOX12O15370 315 aa11.68□□□□□ -0.54
SNRPA-202ENST00000596860 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
SNRPA-202ENST00000596860 SLIT2O94813 1529 aa11.68□□□□□ -0.54
SNRPA-202ENST00000596860 NRAPQ86VF7 1730 aa11.68□□□□□ -0.54
SNRPA-202ENST00000596860 WDR17Q8IZU2 1322 aa11.66□□□□□ -0.54
SNRPA-202ENST00000596860 FAM83GA6ND36 823 aa11.66□□□□□ -0.54
SNRPA-202ENST00000596860 ADAMTS8Q9UP79 889 aa11.66□□□□□ -0.54
SNRPA-202ENST00000596860 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
SNRPA-202ENST00000596860 RGPD2P0DJD1 1756 aa11.65□□□□□ -0.54
SNRPA-202ENST00000596860 U2AF1L5P0DN76 240 aaPredicted RBP11.65□□□□□ -0.54
SNRPA-202ENST00000596860 U2AF1Q01081 240 aaKnown RBP eCLIP11.65□□□□□ -0.54
SNRPA-202ENST00000596860 FNBP4Q8N3X1 1017 aaPredicted RBP11.65□□□□□ -0.54
SNRPA-202ENST00000596860 ANKRD24Q8TF21 1146 aa11.65□□□□□ -0.54
SNRPA-202ENST00000596860 LRP6O75581 1613 aa11.64□□□□□ -0.55
SNRPA-202ENST00000596860 CRB1P82279 1406 aa11.64□□□□□ -0.55
SNRPA-202ENST00000596860 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
SNRPA-202ENST00000596860 EYA1Q99502 592 aa11.64□□□□□ -0.55
SNRPA-202ENST00000596860 CARD10Q9BWT7 1032 aa11.64□□□□□ -0.55
SNRPA-202ENST00000596860 RSPH6AQ9H0K4 717 aa11.64□□□□□ -0.55
SNRPA-202ENST00000596860 U2SURPO15042 1029 aaKnown RBP11.63□□□□□ -0.55
SNRPA-202ENST00000596860 NEFMP07197 916 aa11.63□□□□□ -0.55
SNRPA-202ENST00000596860 CHRNA2Q15822 529 aa11.63□□□□□ -0.55
SNRPA-202ENST00000596860 MEX3CQ5U5Q3 659 aaKnown RBP11.63□□□□□ -0.55
SNRPA-202ENST00000596860 FAM9BQ8IZU0 186 aa11.63□□□□□ -0.55
SNRPA-202ENST00000596860 PLEKHF1Q96S99 279 aa11.63□□□□□ -0.55
SNRPA-202ENST00000596860 PARP4Q9UKK3 1724 aaKnown RBP11.63□□□□□ -0.55
SNRPA-202ENST00000596860 BTG4Q9NY30 223 aa11.62□□□□□ -0.55
SNRPA-202ENST00000596860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNRPA-202ENST00000596860 THRAP3Q9Y2W1 955 aaKnown RBP11.62□□□□□ -0.55
SNRPA-202ENST00000596860 WNK3Q9BYP7 1800 aa11.62□□□□□ -0.55
SNRPA-202ENST00000596860 PKD1L3Q7Z443 1732 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 RXRBP28702 533 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 CCDC27Q2M243 656 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 SULT6B1Q6IMI4 303 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 UNC5CLQ8IV45 518 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
SNRPA-202ENST00000596860 MAPK8IP3Q9UPT6 1336 aa11.6□□□□□ -0.55
SNRPA-202ENST00000596860 BCL9LQ86UU0 1499 aa11.6□□□□□ -0.55
SNRPA-202ENST00000596860 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
SNRPA-202ENST00000596860 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
SNRPA-202ENST00000596860 EVA1CP58658 441 aa11.6□□□□□ -0.55
SNRPA-202ENST00000596860 AMOTQ4VCS5 1084 aa11.6□□□□□ -0.55
SNRPA-202ENST00000596860 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNRPA-202ENST00000596860 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
SNRPA-202ENST00000596860 NUTM2BA6NNL0 878 aaPredicted RBP11.59□□□□□ -0.55
SNRPA-202ENST00000596860 NUTM2EB1AL46 878 aaPredicted RBP11.59□□□□□ -0.55
SNRPA-202ENST00000596860 CSB-PGBD3P0DP91 1061 aa11.59□□□□□ -0.55
SNRPA-202ENST00000596860 PRKAR2BP31323 418 aa11.59□□□□□ -0.55
SNRPA-202ENST00000596860 VPS72Q15906 364 aa11.59□□□□□ -0.55
SNRPA-202ENST00000596860 NUTM2AQ8IVF1 878 aaPredicted RBP11.59□□□□□ -0.55
SNRPA-202ENST00000596860 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
SNRPA-202ENST00000596860 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
SNRPA-202ENST00000596860 DLG5Q8TDM6 1919 aa11.58□□□□□ -0.55
SNRPA-202ENST00000596860 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
SNRPA-202ENST00000596860 TOM1L2Q6ZVM7 507 aa11.58□□□□□ -0.56
SNRPA-202ENST00000596860 GAS2L2Q8NHY3 880 aa11.58□□□□□ -0.56
SNRPA-202ENST00000596860 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
SNRPA-202ENST00000596860 NLRP2Q9NX02 1062 aa11.58□□□□□ -0.56
SNRPA-202ENST00000596860 OVOS2A0A0G2JMS6 1433 aa11.58□□□□□ -0.56
SNRPA-202ENST00000596860 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
SNRPA-202ENST00000596860 HMOX1P09601 288 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 LMOD3Q0VAK6 560 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 LARP1Q6PKG0 1096 aaKnown RBP11.57□□□□□ -0.56
SNRPA-202ENST00000596860 BARGINQ6ZT62 677 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 RAPGEF4Q8WZA2 1011 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms