RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 PPP6R1Q9UPN7 881 aa19.28■□□□□ 0.68
ZNF541-205ENST00000595558 EIF5BO60841 1220 aaKnown RBP19.28■□□□□ 0.68
ZNF541-205ENST00000595558 FCHSD2O94868 740 aa19.28■□□□□ 0.68
ZNF541-205ENST00000595558 PRKCSHP14314 528 aaPredicted RBP19.28■□□□□ 0.68
ZNF541-205ENST00000595558 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
ZNF541-205ENST00000595558 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
ZNF541-205ENST00000595558 TNRQ92752 1358 aa19.28■□□□□ 0.68
ZNF541-205ENST00000595558 COG3Q96JB2 828 aa19.27■□□□□ 0.68
ZNF541-205ENST00000595558 AGLP35573 1532 aa19.27■□□□□ 0.68
ZNF541-205ENST00000595558 NRXN3Q9Y4C0 1643 aa19.26■□□□□ 0.67
ZNF541-205ENST00000595558 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
ZNF541-205ENST00000595558 CHMP5Q9NZZ3 219 aa19.26■□□□□ 0.67
ZNF541-205ENST00000595558 NUCB1Q02818 461 aa19.26■□□□□ 0.67
ZNF541-205ENST00000595558 IL16Q14005 1332 aa19.26■□□□□ 0.67
ZNF541-205ENST00000595558 NUTM2GQ5VZR2 741 aa19.25■□□□□ 0.67
ZNF541-205ENST00000595558 ANKRD26Q9UPS8 1709 aa19.25■□□□□ 0.67
ZNF541-205ENST00000595558 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.25■□□□□ 0.67
ZNF541-205ENST00000595558 LRRC7Q96NW7 1537 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 PLEKHG5O94827 1062 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 TMEM2Q9UHN6 1383 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 MAP2P11137 1827 aaKnown RBP19.24■□□□□ 0.67
ZNF541-205ENST00000595558 TRAK2O60296 914 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 ACEP12821 1306 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 KIF13AQ9H1H9 1805 aa19.24■□□□□ 0.67
ZNF541-205ENST00000595558 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
ZNF541-205ENST00000595558 L1TD1Q5T7N2 865 aaKnown RBP19.23■□□□□ 0.67
ZNF541-205ENST00000595558 CHD1LQ86WJ1 897 aa19.23■□□□□ 0.67
ZNF541-205ENST00000595558 MED14O60244 1454 aa19.23■□□□□ 0.67
ZNF541-205ENST00000595558 HSCBQ8IWL3 235 aa19.23■□□□□ 0.67
ZNF541-205ENST00000595558 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
ZNF541-205ENST00000595558 FSD2A1L4K1 749 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 GOLGA6L3A6NEY3 463 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 C8orf58Q8NAV2 365 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 MBIPQ9NS73 344 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 SETD1AO15047 1707 aaKnown RBP19.22■□□□□ 0.67
ZNF541-205ENST00000595558 IPO8O15397 1037 aaKnown RBP19.22■□□□□ 0.67
ZNF541-205ENST00000595558 NFE2L2Q16236 605 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 MIS18AQ9NYP9 233 aa19.22■□□□□ 0.67
ZNF541-205ENST00000595558 ANKRD45Q5TZF3 282 aa19.21■□□□□ 0.67
ZNF541-205ENST00000595558 CD2BP2O95400 341 aaKnown RBP19.21■□□□□ 0.66
ZNF541-205ENST00000595558 MCM10Q7L590 875 aa19.21■□□□□ 0.66
ZNF541-205ENST00000595558 FOXD4L1Q9NU39 408 aa19.21■□□□□ 0.66
ZNF541-205ENST00000595558 AMOTL2Q9Y2J4 779 aa19.2■□□□□ 0.66
ZNF541-205ENST00000595558 ZBTB7BO15156 539 aaPredicted RBP19.2■□□□□ 0.66
ZNF541-205ENST00000595558 VAMP4O75379 141 aa19.19■□□□□ 0.66
ZNF541-205ENST00000595558 RBM25P49756 843 aaKnown RBP19.19■□□□□ 0.66
ZNF541-205ENST00000595558 ADAMTS13Q76LX8 1427 aa19.19■□□□□ 0.66
ZNF541-205ENST00000595558 FOXO3O43524 673 aa19.19■□□□□ 0.66
ZNF541-205ENST00000595558 DDIT3P35638 169 aa19.19■□□□□ 0.66
ZNF541-205ENST00000595558 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
ZNF541-205ENST00000595558 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
ZNF541-205ENST00000595558 KIF2CQ99661 725 aa19.19■□□□□ 0.66
ZNF541-205ENST00000595558 EDC4Q6P2E9 1401 aaKnown RBP19.18■□□□□ 0.66
ZNF541-205ENST00000595558 SIRT2Q8IXJ6 389 aa19.18■□□□□ 0.66
ZNF541-205ENST00000595558 RBM42Q9BTD8 480 aaKnown RBP19.18■□□□□ 0.66
ZNF541-205ENST00000595558 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
ZNF541-205ENST00000595558 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
ZNF541-205ENST00000595558 TTC21BQ7Z4L5 1316 aa19.17■□□□□ 0.66
ZNF541-205ENST00000595558 TRHP20396 242 aaPredicted RBP19.17■□□□□ 0.66
ZNF541-205ENST00000595558 ATP7BP35670 1465 aa19.17■□□□□ 0.66
ZNF541-205ENST00000595558 PTPRUQ92729 1446 aa19.17■□□□□ 0.66
ZNF541-205ENST00000595558 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
ZNF541-205ENST00000595558 REREQ9P2R6 1566 aa19.16■□□□□ 0.66
ZNF541-205ENST00000595558 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
ZNF541-205ENST00000595558 HDGFP51858 240 aaKnown RBP19.16■□□□□ 0.66
ZNF541-205ENST00000595558 TNPO1Q92973 898 aaKnown RBP19.16■□□□□ 0.66
ZNF541-205ENST00000595558 NCOA3Q9Y6Q9 1424 aa19.15■□□□□ 0.66
ZNF541-205ENST00000595558 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
ZNF541-205ENST00000595558 BMP2KLQ5H9B9 411 aa19.14■□□□□ 0.65
ZNF541-205ENST00000595558 TBC1D9Q6ZT07 1266 aa19.14■□□□□ 0.65
ZNF541-205ENST00000595558 HSP90AB1P08238 724 aaKnown RBP19.13■□□□□ 0.65
ZNF541-205ENST00000595558 TWISTNBQ3B726 338 aaPredicted RBP19.13■□□□□ 0.65
ZNF541-205ENST00000595558 CDC42BPGQ6DT37 1551 aa19.13■□□□□ 0.65
ZNF541-205ENST00000595558 SNX21Q969T3 373 aa19.13■□□□□ 0.65
ZNF541-205ENST00000595558 NGDNQ8NEJ9 315 aaKnown RBP19.11■□□□□ 0.65
ZNF541-205ENST00000595558 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
ZNF541-205ENST00000595558 EID1Q9Y6B2 187 aa19.1■□□□□ 0.65
ZNF541-205ENST00000595558 BRPF1P55201 1214 aaPredicted RBP19.1■□□□□ 0.65
ZNF541-205ENST00000595558 GAS2L3Q86XJ1 694 aa19.1■□□□□ 0.65
ZNF541-205ENST00000595558 LTV1Q96GA3 475 aaPredicted RBP19.1■□□□□ 0.65
ZNF541-205ENST00000595558 DDX11L8A8MPP1 907 aa19.09■□□□□ 0.65
ZNF541-205ENST00000595558 ZNF853P0CG23 659 aa19.09■□□□□ 0.65
ZNF541-205ENST00000595558 KCNA6P17658 529 aa19.09■□□□□ 0.65
ZNF541-205ENST00000595558 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
ZNF541-205ENST00000595558 GRPEL1Q9HAV7 217 aa19.08■□□□□ 0.65
ZNF541-205ENST00000595558 GNAI1P63096 354 aa19.08■□□□□ 0.64
ZNF541-205ENST00000595558 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 C14orf37Q86TY3 774 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 UBR1Q8IWV7 1749 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 CFAP44Q96MT7 982 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 PTCH1Q13635 1447 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 ABCC4O15439 1325 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 GSPT1P15170 499 aaKnown RBP19.07■□□□□ 0.64
ZNF541-205ENST00000595558 RAB3GAP1Q15042 981 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 IFT57Q9NWB7 429 aa19.07■□□□□ 0.64
ZNF541-205ENST00000595558 HSP90AA1P07900 732 aaKnown RBP19.06■□□□□ 0.64
ZNF541-205ENST00000595558 MRE11P49959 708 aa19.06■□□□□ 0.64
ZNF541-205ENST00000595558 C16orf71Q8IYS4 520 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms