RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 MAGEC2Q9UBF1 373 aaPredicted RBP21.76■■□□□ 1.07
SYNM-204ENST00000594047 ANKRD50Q9ULJ7 1429 aa21.75■■□□□ 1.07
SYNM-204ENST00000594047 CDC45O75419 566 aa21.75■■□□□ 1.07
SYNM-204ENST00000594047 ZNF622Q969S3 477 aaKnown RBP eCLIP21.75■■□□□ 1.07
SYNM-204ENST00000594047 NEK4P51957 841 aa21.74■■□□□ 1.07
SYNM-204ENST00000594047 DCTN1Q14203 1278 aa21.74■■□□□ 1.07
SYNM-204ENST00000594047 FOXO3O43524 673 aa21.74■■□□□ 1.07
SYNM-204ENST00000594047 GNAI3P08754 354 aa21.74■■□□□ 1.07
SYNM-204ENST00000594047 TMOD2Q9NZR1 351 aa21.74■■□□□ 1.07
SYNM-204ENST00000594047 GPTP24298 496 aa21.73■■□□□ 1.07
SYNM-204ENST00000594047 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
SYNM-204ENST00000594047 TTC16Q8NEE8 873 aa21.73■■□□□ 1.07
SYNM-204ENST00000594047 NACAP1Q9BZK3 213 aa21.73■■□□□ 1.07
SYNM-204ENST00000594047 TXLNAP40222 546 aa21.73■■□□□ 1.07
SYNM-204ENST00000594047 MINDY4BA8MYZ0 360 aa21.72■■□□□ 1.07
SYNM-204ENST00000594047 NESP48681 1621 aa21.72■■□□□ 1.07
SYNM-204ENST00000594047 FIBPO43427 364 aa21.72■■□□□ 1.07
SYNM-204ENST00000594047 SETQ01105 290 aaPredicted RBP21.72■■□□□ 1.07
SYNM-204ENST00000594047 ANKRD62A6NC57 917 aa21.72■■□□□ 1.07
SYNM-204ENST00000594047 THUMPD2Q9BTF0 503 aaKnown RBP21.72■■□□□ 1.07
SYNM-204ENST00000594047 POLR3DP05423 398 aaPredicted RBP21.72■■□□□ 1.07
SYNM-204ENST00000594047 MCM10Q7L590 875 aa21.72■■□□□ 1.07
SYNM-204ENST00000594047 TMEM87AQ8NBN3 555 aa21.71■■□□□ 1.07
SYNM-204ENST00000594047 ACSBG1Q96GR2 724 aa21.71■■□□□ 1.07
SYNM-204ENST00000594047 METTL24Q5JXM2 366 aa21.71■■□□□ 1.07
SYNM-204ENST00000594047 CWC27Q6UX04 472 aaKnown RBP21.71■■□□□ 1.07
SYNM-204ENST00000594047 DHX8Q14562 1220 aaKnown RBP21.71■■□□□ 1.07
SYNM-204ENST00000594047 PPP2R1AP30153 589 aa21.7■■□□□ 1.06
SYNM-204ENST00000594047 STK38Q15208 465 aa21.7■■□□□ 1.06
SYNM-204ENST00000594047 NUTM1Q86Y26 1132 aa21.7■■□□□ 1.06
SYNM-204ENST00000594047 RPGRQ92834 1020 aaKnown RBP21.7■■□□□ 1.06
SYNM-204ENST00000594047 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.69■■□□□ 1.06
SYNM-204ENST00000594047 ZNF771Q7L3S4 317 aaPredicted RBP21.69■■□□□ 1.06
SYNM-204ENST00000594047 MYD88Q99836 296 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 STARD3NLO95772 234 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 GPS2Q13227 327 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 SRGAP3O43295 1099 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 SSR1P43307 286 aaKnown RBP21.69■■□□□ 1.06
SYNM-204ENST00000594047 SRCIN1Q9C0H9 1055 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 CLEC11AQ9Y240 323 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 NEBLO76041 1014 aa21.69■■□□□ 1.06
SYNM-204ENST00000594047 SKOR2Q2VWA4 1001 aaPredicted RBP21.68■■□□□ 1.06
SYNM-204ENST00000594047 SPC24Q8NBT2 197 aa21.68■■□□□ 1.06
SYNM-204ENST00000594047 CCDC82Q8N4S0 544 aa21.68■■□□□ 1.06
SYNM-204ENST00000594047 MNS1Q8NEH6 495 aa21.68■■□□□ 1.06
SYNM-204ENST00000594047 ZBED9Q6R2W3 1325 aa21.68■■□□□ 1.06
SYNM-204ENST00000594047 JARID2Q92833 1246 aaPredicted RBP21.67■■□□□ 1.06
SYNM-204ENST00000594047 C6orf229H3BNL8 230 aa21.67■■□□□ 1.06
SYNM-204ENST00000594047 NEFHP12036 1026 aa21.67■■□□□ 1.06
SYNM-204ENST00000594047 UBAC1Q9BSL1 405 aa21.67■■□□□ 1.06
SYNM-204ENST00000594047 CHRNA2Q15822 529 aa21.66■■□□□ 1.06
SYNM-204ENST00000594047 ERC1Q8IUD2 1116 aa21.65■■□□□ 1.06
SYNM-204ENST00000594047 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
SYNM-204ENST00000594047 ERBINQ96RT1 1412 aa21.65■■□□□ 1.06
SYNM-204ENST00000594047 RRBP1Q9P2E9 1410 aaKnown RBP21.65■■□□□ 1.06
SYNM-204ENST00000594047 CCDC173Q0VFZ6 552 aa21.65■■□□□ 1.06
SYNM-204ENST00000594047 LRRCC1Q9C099 1032 aa21.65■■□□□ 1.06
SYNM-204ENST00000594047 IGF1RP08069 1367 aa21.65■■□□□ 1.06
SYNM-204ENST00000594047 FAM177A1Q8N128 213 aaPredicted RBP21.65■■□□□ 1.06
SYNM-204ENST00000594047 C8orf37Q96NL8 207 aa21.64■■□□□ 1.06
SYNM-204ENST00000594047 CEP126Q9P2H0 1117 aa21.64■■□□□ 1.06
SYNM-204ENST00000594047 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
SYNM-204ENST00000594047 AK7Q96M32 723 aa21.64■■□□□ 1.05
SYNM-204ENST00000594047 CCDC96Q2M329 555 aa21.64■■□□□ 1.05
SYNM-204ENST00000594047 KINO60870 393 aaKnown RBP21.63■■□□□ 1.05
SYNM-204ENST00000594047 TRIM22Q8IYM9 498 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 UBAP1LF5GYI3 381 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 AIDAQ96BJ3 306 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 FAM13BQ9NYF5 915 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 PDZRN3Q9UPQ7 1066 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 DZIP1Q86YF9 867 aaKnown RBP21.63■■□□□ 1.05
SYNM-204ENST00000594047 TRIM5Q9C035 493 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
SYNM-204ENST00000594047 PRPF40AO75400 957 aaKnown RBP21.62■■□□□ 1.05
SYNM-204ENST00000594047 CAVIN1Q6NZI2 390 aaKnown RBP21.62■■□□□ 1.05
SYNM-204ENST00000594047 DDX11Q96FC9 970 aa21.62■■□□□ 1.05
SYNM-204ENST00000594047 NAT10Q9H0A0 1025 aaKnown RBP21.62■■□□□ 1.05
SYNM-204ENST00000594047 FGD6Q6ZV73 1430 aa21.62■■□□□ 1.05
SYNM-204ENST00000594047 MKNK2Q9HBH9 465 aa21.62■■□□□ 1.05
SYNM-204ENST00000594047 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
SYNM-204ENST00000594047 ME1P48163 572 aa21.61■■□□□ 1.05
SYNM-204ENST00000594047 CHMP5Q9NZZ3 219 aa21.61■■□□□ 1.05
SYNM-204ENST00000594047 DEF6Q9H4E7 631 aa21.61■■□□□ 1.05
SYNM-204ENST00000594047 FBXO31Q5XUX0 539 aaPredicted RBP21.61■■□□□ 1.05
SYNM-204ENST00000594047 UBA5Q9GZZ9 404 aa21.61■■□□□ 1.05
SYNM-204ENST00000594047 TRMT112Q9UI30 125 aaKnown RBP21.61■■□□□ 1.05
SYNM-204ENST00000594047 F8W031 263 aaPredicted RBP21.6■■□□□ 1.05
SYNM-204ENST00000594047 ZNF692Q9BU19 519 aaPredicted RBP21.6■■□□□ 1.05
SYNM-204ENST00000594047 ZBTB3Q9H5J0 574 aa21.6■■□□□ 1.05
SYNM-204ENST00000594047 ZNF652Q9Y2D9 606 aa21.6■■□□□ 1.05
SYNM-204ENST00000594047 GNAT3A8MTJ3 354 aa21.59■■□□□ 1.05
SYNM-204ENST00000594047 CAVIN4Q5BKX8 364 aa21.59■■□□□ 1.05
SYNM-204ENST00000594047 SMARCA5O60264 1052 aaPredicted RBP21.59■■□□□ 1.05
SYNM-204ENST00000594047 PSMD1Q99460 953 aa21.59■■□□□ 1.05
SYNM-204ENST00000594047 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
SYNM-204ENST00000594047 SERPINC1P01008 464 aa21.59■■□□□ 1.05
SYNM-204ENST00000594047 VTI1AQ96AJ9 217 aa21.58■■□□□ 1.05
SYNM-204ENST00000594047 FILIP1LQ4L180 1135 aa21.58■■□□□ 1.05
SYNM-204ENST00000594047 GSE1Q14687 1217 aa21.58■■□□□ 1.04
SYNM-204ENST00000594047 CYP46A1Q9Y6A2 500 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms