RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 EIF4A2Q14240 407 aaKnown RBP17.45■□□□□ 0.38
VRK3-205ENST00000593919 KIF24Q5T7B8 1368 aa17.45■□□□□ 0.38
VRK3-205ENST00000593919 CRYBG1Q9Y4K1 1723 aa17.45■□□□□ 0.38
VRK3-205ENST00000593919 PLEKHG5O94827 1062 aa17.44■□□□□ 0.38
VRK3-205ENST00000593919 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
VRK3-205ENST00000593919 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
VRK3-205ENST00000593919 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
VRK3-205ENST00000593919 GCP02774 474 aa17.44■□□□□ 0.38
VRK3-205ENST00000593919 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
VRK3-205ENST00000593919 SOS2Q07890 1332 aaPredicted RBP17.43■□□□□ 0.38
VRK3-205ENST00000593919 HOXC9P31274 260 aa17.43■□□□□ 0.38
VRK3-205ENST00000593919 RTL1A6NKG5 1358 aa17.43■□□□□ 0.38
VRK3-205ENST00000593919 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
VRK3-205ENST00000593919 FCHSD2O94868 740 aa17.42■□□□□ 0.38
VRK3-205ENST00000593919 HMOX1P09601 288 aa17.42■□□□□ 0.38
VRK3-205ENST00000593919 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
VRK3-205ENST00000593919 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
VRK3-205ENST00000593919 ZNF521Q96K83 1311 aa17.41■□□□□ 0.38
VRK3-205ENST00000593919 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
VRK3-205ENST00000593919 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
VRK3-205ENST00000593919 RRP7AQ9Y3A4 280 aaKnown RBP17.4■□□□□ 0.38
VRK3-205ENST00000593919 MAPK8IP3Q9UPT6 1336 aa17.39■□□□□ 0.38
VRK3-205ENST00000593919 PRKAR2BP31323 418 aa17.39■□□□□ 0.37
VRK3-205ENST00000593919 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
VRK3-205ENST00000593919 RGPD5Q99666 1765 aa17.39■□□□□ 0.37
VRK3-205ENST00000593919 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
VRK3-205ENST00000593919 ARHGEF25Q86VW2 580 aa17.39■□□□□ 0.37
VRK3-205ENST00000593919 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
VRK3-205ENST00000593919 ZBTB7CA1YPR0 619 aa17.38■□□□□ 0.37
VRK3-205ENST00000593919 IP6K1Q92551 441 aa17.38■□□□□ 0.37
VRK3-205ENST00000593919 CABLES1Q8TDN4 633 aa17.37■□□□□ 0.37
VRK3-205ENST00000593919 ABCA3Q99758 1704 aa17.37■□□□□ 0.37
VRK3-205ENST00000593919 DLG5Q8TDM6 1919 aa17.37■□□□□ 0.37
VRK3-205ENST00000593919 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
VRK3-205ENST00000593919 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
VRK3-205ENST00000593919 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
VRK3-205ENST00000593919 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
VRK3-205ENST00000593919 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
VRK3-205ENST00000593919 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
VRK3-205ENST00000593919 WWC1Q8IX03 1113 aa17.35■□□□□ 0.37
VRK3-205ENST00000593919 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
VRK3-205ENST00000593919 EYA1Q99502 592 aa17.35■□□□□ 0.37
VRK3-205ENST00000593919 NEFMP07197 916 aa17.34■□□□□ 0.37
VRK3-205ENST00000593919 GOLGA2Q08379 1002 aa17.34■□□□□ 0.37
VRK3-205ENST00000593919 LTV1Q96GA3 475 aaPredicted RBP17.34■□□□□ 0.37
VRK3-205ENST00000593919 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
VRK3-205ENST00000593919 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
VRK3-205ENST00000593919 COL18A1P39060 1754 aa17.34■□□□□ 0.37
VRK3-205ENST00000593919 CCDC27Q2M243 656 aa17.33■□□□□ 0.37
VRK3-205ENST00000593919 KDRP35968 1356 aa17.33■□□□□ 0.36
VRK3-205ENST00000593919 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
VRK3-205ENST00000593919 PHLPP1O60346 1717 aa17.31■□□□□ 0.36
VRK3-205ENST00000593919 TOM1O60784 492 aa17.31■□□□□ 0.36
VRK3-205ENST00000593919 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
VRK3-205ENST00000593919 RIPK4P57078 832 aa17.3■□□□□ 0.36
VRK3-205ENST00000593919 TRIM35Q9UPQ4 493 aa17.3■□□□□ 0.36
VRK3-205ENST00000593919 CPDO75976 1380 aa17.3■□□□□ 0.36
VRK3-205ENST00000593919 KIAA0232Q92628 1395 aa17.3■□□□□ 0.36
VRK3-205ENST00000593919 ABCC6O95255 1503 aa17.3■□□□□ 0.36
VRK3-205ENST00000593919 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
VRK3-205ENST00000593919 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
VRK3-205ENST00000593919 DUSP27Q5VZP5 1158 aa17.29■□□□□ 0.36
VRK3-205ENST00000593919 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
VRK3-205ENST00000593919 COL16A1Q07092 1604 aaPredicted RBP17.28■□□□□ 0.36
VRK3-205ENST00000593919 ANKRD24Q8TF21 1146 aa17.28■□□□□ 0.36
VRK3-205ENST00000593919 E9PSI1 815 aa17.28■□□□□ 0.36
VRK3-205ENST00000593919 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
VRK3-205ENST00000593919 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
VRK3-205ENST00000593919 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
VRK3-205ENST00000593919 LRRC59Q96AG4 307 aaKnown RBP17.28■□□□□ 0.36
VRK3-205ENST00000593919 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
VRK3-205ENST00000593919 ERBB3P21860 1342 aa17.27■□□□□ 0.36
VRK3-205ENST00000593919 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
VRK3-205ENST00000593919 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
VRK3-205ENST00000593919 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.36
VRK3-205ENST00000593919 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.36
VRK3-205ENST00000593919 HAP1P54257 671 aaPredicted RBP17.26■□□□□ 0.35
VRK3-205ENST00000593919 COL22A1Q8NFW1 1626 aaPredicted RBP17.26■□□□□ 0.35
VRK3-205ENST00000593919 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
VRK3-205ENST00000593919 UBAP1LF5GYI3 381 aa17.26■□□□□ 0.35
VRK3-205ENST00000593919 LMO7Q8WWI1 1683 aa17.25■□□□□ 0.35
VRK3-205ENST00000593919 NCAPD2Q15021 1401 aa17.25■□□□□ 0.35
VRK3-205ENST00000593919 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
VRK3-205ENST00000593919 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
VRK3-205ENST00000593919 MTHFSDQ2M296 383 aaKnown RBP17.22■□□□□ 0.35
VRK3-205ENST00000593919 PRKCSHP14314 528 aaPredicted RBP17.21■□□□□ 0.35
VRK3-205ENST00000593919 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
VRK3-205ENST00000593919 CERKQ8TCT0 537 aa17.21■□□□□ 0.35
VRK3-205ENST00000593919 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
VRK3-205ENST00000593919 FAM83GA6ND36 823 aa17.2■□□□□ 0.34
VRK3-205ENST00000593919 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
VRK3-205ENST00000593919 IL16Q14005 1332 aa17.2■□□□□ 0.34
VRK3-205ENST00000593919 GAS2L2Q8NHY3 880 aa17.19■□□□□ 0.34
VRK3-205ENST00000593919 MYH16Q9H6N6 1097 aa17.19■□□□□ 0.34
VRK3-205ENST00000593919 COL5A2P05997 1499 aaPredicted RBP17.19■□□□□ 0.34
VRK3-205ENST00000593919 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
VRK3-205ENST00000593919 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
VRK3-205ENST00000593919 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
VRK3-205ENST00000593919 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
VRK3-205ENST00000593919 TSR2Q969E8 191 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms