RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 TRIM6-TRIM34B2RNG4 842 aa17.44■□□□□ 0.38
CIRBP-242ENST00000593093 RILPL2Q969X0 211 aa17.44■□□□□ 0.38
CIRBP-242ENST00000593093 STAC3Q96MF2 364 aa17.44■□□□□ 0.38
CIRBP-242ENST00000593093 ATP7AQ04656 1500 aa17.44■□□□□ 0.38
CIRBP-242ENST00000593093 FAM83GA6ND36 823 aa17.44■□□□□ 0.38
CIRBP-242ENST00000593093 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
CIRBP-242ENST00000593093 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-242ENST00000593093 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-242ENST00000593093 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
CIRBP-242ENST00000593093 LARP6Q9BRS8 491 aaKnown RBP17.43■□□□□ 0.38
CIRBP-242ENST00000593093 TMEM63CQ9P1W3 806 aa17.43■□□□□ 0.38
CIRBP-242ENST00000593093 NOS1P29475 1434 aa17.43■□□□□ 0.38
CIRBP-242ENST00000593093 CBX1P83916 185 aa17.43■□□□□ 0.38
CIRBP-242ENST00000593093 GPT2Q8TD30 523 aa17.43■□□□□ 0.38
CIRBP-242ENST00000593093 MAST1Q9Y2H9 1570 aa17.43■□□□□ 0.38
CIRBP-242ENST00000593093 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
CIRBP-242ENST00000593093 SIRT2Q8IXJ6 389 aa17.42■□□□□ 0.38
CIRBP-242ENST00000593093 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
CIRBP-242ENST00000593093 CHMP3Q9Y3E7 222 aa17.42■□□□□ 0.38
CIRBP-242ENST00000593093 ATP10AO60312 1499 aa17.42■□□□□ 0.38
CIRBP-242ENST00000593093 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
CIRBP-242ENST00000593093 ZKSCAN5Q9Y2L8 839 aa17.42■□□□□ 0.38
CIRBP-242ENST00000593093 PTPRTO14522 1441 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 KRT24Q2M2I5 525 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 SYNMO15061 1565 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 IGSF3O75054 1194 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 FBXO31Q5XUX0 539 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-242ENST00000593093 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 CCDC39Q9UFE4 941 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 NOL7Q9UMY1 257 aaKnown RBP17.41■□□□□ 0.38
CIRBP-242ENST00000593093 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
CIRBP-242ENST00000593093 SDSP20132 328 aa17.4■□□□□ 0.38
CIRBP-242ENST00000593093 CSPP1Q1MSJ5 1256 aa17.39■□□□□ 0.37
CIRBP-242ENST00000593093 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-242ENST00000593093 C8orf58Q8NAV2 365 aa17.39■□□□□ 0.37
CIRBP-242ENST00000593093 TTC12Q9H892 705 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-242ENST00000593093 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
CIRBP-242ENST00000593093 NECTIN2Q92692 538 aa17.39■□□□□ 0.37
CIRBP-242ENST00000593093 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
CIRBP-242ENST00000593093 FYB1O15117 783 aa17.38■□□□□ 0.37
CIRBP-242ENST00000593093 VAMP4O75379 141 aa17.38■□□□□ 0.37
CIRBP-242ENST00000593093 USP26Q9BXU7 913 aa17.38■□□□□ 0.37
CIRBP-242ENST00000593093 ZNF445P59923 1031 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 PPIP5K1Q6PFW1 1433 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 PLXNC1O60486 1568 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 UNC13BO14795 1591 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
CIRBP-242ENST00000593093 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
CIRBP-242ENST00000593093 REC8O95072 547 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 TTC22Q5TAA0 569 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 LRSAM1Q6UWE0 723 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 MAP7D2Q96T17 732 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
CIRBP-242ENST00000593093 GTF2E1P29083 439 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-242ENST00000593093 IDI1Q13907 227 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 ALDH1L2Q3SY69 923 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 SASS6Q6UVJ0 657 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
CIRBP-242ENST00000593093 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.35■□□□□ 0.37
CIRBP-242ENST00000593093 ESF1Q9H501 851 aaKnown RBP17.35■□□□□ 0.37
CIRBP-242ENST00000593093 C14orf93Q9H972 538 aaKnown RBP17.35■□□□□ 0.37
CIRBP-242ENST00000593093 ZMYM3Q14202 1370 aa17.35■□□□□ 0.37
CIRBP-242ENST00000593093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-242ENST00000593093 GNAI1P63096 354 aa17.34■□□□□ 0.37
CIRBP-242ENST00000593093 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
CIRBP-242ENST00000593093 ZNF518AQ6AHZ1 1483 aa17.34■□□□□ 0.37
CIRBP-242ENST00000593093 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
CIRBP-242ENST00000593093 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.37
CIRBP-242ENST00000593093 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.37
CIRBP-242ENST00000593093 TMX3Q96JJ7 454 aa17.33■□□□□ 0.37
CIRBP-242ENST00000593093 CWC22Q9HCG8 908 aaKnown RBP17.33■□□□□ 0.37
CIRBP-242ENST00000593093 ABCC11Q96J66 1382 aa17.33■□□□□ 0.36
CIRBP-242ENST00000593093 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.36
CIRBP-242ENST00000593093 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-242ENST00000593093 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
CIRBP-242ENST00000593093 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
CIRBP-242ENST00000593093 SYAP1Q96A49 352 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-242ENST00000593093 F6X3S4 739 aa17.32■□□□□ 0.36
CIRBP-242ENST00000593093 ERC2O15083 957 aa17.32■□□□□ 0.36
CIRBP-242ENST00000593093 FIBPO43427 364 aa17.32■□□□□ 0.36
CIRBP-242ENST00000593093 ZDHHC9Q9Y397 364 aa17.32■□□□□ 0.36
CIRBP-242ENST00000593093 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
CIRBP-242ENST00000593093 MEIS3Q99687 375 aa17.31■□□□□ 0.36
CIRBP-242ENST00000593093 NCOA3Q9Y6Q9 1424 aa17.31■□□□□ 0.36
CIRBP-242ENST00000593093 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
CIRBP-242ENST00000593093 HCLS1P14317 486 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-242ENST00000593093 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
CIRBP-242ENST00000593093 NFE2L2Q16236 605 aa17.3■□□□□ 0.36
CIRBP-242ENST00000593093 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms