RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
VPS4B-207ENST00000591519 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
VPS4B-207ENST00000591519 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.01
VPS4B-207ENST00000591519 GALR2O43603 387 aaPredicted RBP14.95□□□□□ -0.02
VPS4B-207ENST00000591519 GCP02774 474 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 BAG6P46379 1132 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 CLCN6P51797 869 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 DCBLD2Q96PD2 775 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 THSD7AQ9UPZ6 1657 aa14.95□□□□□ -0.02
VPS4B-207ENST00000591519 EVA1CP58658 441 aa14.94□□□□□ -0.02
VPS4B-207ENST00000591519 PHF12Q96QT6 1004 aa14.94□□□□□ -0.02
VPS4B-207ENST00000591519 STRN4Q9NRL3 753 aa14.94□□□□□ -0.02
VPS4B-207ENST00000591519 PROM2Q8N271 834 aa14.93□□□□□ -0.02
VPS4B-207ENST00000591519 CAMTA1Q9Y6Y1 1673 aa14.93□□□□□ -0.02
VPS4B-207ENST00000591519 EVC2Q86UK5 1308 aa14.92□□□□□ -0.02
VPS4B-207ENST00000591519 SSH2Q76I76 1423 aa14.92□□□□□ -0.02
VPS4B-207ENST00000591519 FAM182BQ5T319 152 aa14.92□□□□□ -0.02
VPS4B-207ENST00000591519 FAM196AQ6ZSG2 479 aa14.92□□□□□ -0.02
VPS4B-207ENST00000591519 DISP2A7MBM2 1401 aa14.92□□□□□ -0.02
VPS4B-207ENST00000591519 USP6P35125 1406 aa14.92□□□□□ -0.02
VPS4B-207ENST00000591519 QRICH2Q9H0J4 1663 aa14.91□□□□□ -0.02
VPS4B-207ENST00000591519 NRKQ7Z2Y5 1582 aa14.91□□□□□ -0.02
VPS4B-207ENST00000591519 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
VPS4B-207ENST00000591519 THRAP3Q9Y2W1 955 aaKnown RBP14.91□□□□□ -0.02
VPS4B-207ENST00000591519 LMO7Q8WWI1 1683 aa14.9□□□□□ -0.02
VPS4B-207ENST00000591519 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
VPS4B-207ENST00000591519 NEUROD1Q13562 356 aa14.9□□□□□ -0.02
VPS4B-207ENST00000591519 TCP11L2Q8N4U5 519 aa14.9□□□□□ -0.02
VPS4B-207ENST00000591519 TRPM1Q7Z4N2 1603 aa14.9□□□□□ -0.02
VPS4B-207ENST00000591519 NLRP6P59044 892 aa14.89□□□□□ -0.03
VPS4B-207ENST00000591519 USP35Q9P2H5 1018 aa14.89□□□□□ -0.03
VPS4B-207ENST00000591519 RGPD1P0DJD0 1748 aa14.89□□□□□ -0.03
VPS4B-207ENST00000591519 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
VPS4B-207ENST00000591519 AATKQ6ZMQ8 1374 aa14.87□□□□□ -0.03
VPS4B-207ENST00000591519 PDE3BQ13370 1112 aa14.87□□□□□ -0.03
VPS4B-207ENST00000591519 CAMKK2Q96RR4 588 aa14.87□□□□□ -0.03
VPS4B-207ENST00000591519 TRIM37O94972 964 aa14.86□□□□□ -0.03
VPS4B-207ENST00000591519 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
VPS4B-207ENST00000591519 SLIT3O75094 1523 aa14.86□□□□□ -0.03
VPS4B-207ENST00000591519 TTC21BQ7Z4L5 1316 aa14.85□□□□□ -0.03
VPS4B-207ENST00000591519 SBNO2Q9Y2G9 1366 aa14.85□□□□□ -0.03
VPS4B-207ENST00000591519 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
VPS4B-207ENST00000591519 TNS1Q9HBL0 1735 aaKnown RBP14.84□□□□□ -0.03
VPS4B-207ENST00000591519 C11orf95C9JLR9 678 aaPredicted RBP14.84□□□□□ -0.03
VPS4B-207ENST00000591519 EZH2Q15910 746 aaKnown RBP14.84□□□□□ -0.03
VPS4B-207ENST00000591519 KCNH5Q8NCM2 988 aa14.84□□□□□ -0.03
VPS4B-207ENST00000591519 TTC21AQ8NDW8 1320 aa14.84□□□□□ -0.03
VPS4B-207ENST00000591519 PARD3Q8TEW0 1356 aa14.84□□□□□ -0.03
VPS4B-207ENST00000591519 CRB1P82279 1406 aa14.83□□□□□ -0.03
VPS4B-207ENST00000591519 PSDA5PKW4 1024 aaPredicted RBP14.83□□□□□ -0.04
VPS4B-207ENST00000591519 APBA3O96018 575 aa14.83□□□□□ -0.04
VPS4B-207ENST00000591519 ARHGEF25Q86VW2 580 aa14.83□□□□□ -0.04
VPS4B-207ENST00000591519 AXIN2Q9Y2T1 843 aa14.83□□□□□ -0.04
VPS4B-207ENST00000591519 COL18A1P39060 1754 aa14.83□□□□□ -0.04
VPS4B-207ENST00000591519 LRP5O75197 1615 aa14.82□□□□□ -0.04
VPS4B-207ENST00000591519 PIK3C2AO00443 1686 aa14.82□□□□□ -0.04
VPS4B-207ENST00000591519 TRIM26Q12899 539 aaPredicted RBP14.82□□□□□ -0.04
VPS4B-207ENST00000591519 PARP4Q9UKK3 1724 aaKnown RBP14.8□□□□□ -0.04
VPS4B-207ENST00000591519 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
VPS4B-207ENST00000591519 PUS7Q96PZ0 661 aaKnown RBP14.8□□□□□ -0.04
VPS4B-207ENST00000591519 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
VPS4B-207ENST00000591519 WDR17Q8IZU2 1322 aa14.8□□□□□ -0.04
VPS4B-207ENST00000591519 R3HDM1Q15032 1099 aaKnown RBP14.79□□□□□ -0.04
VPS4B-207ENST00000591519 TOM1L2Q6ZVM7 507 aa14.79□□□□□ -0.04
VPS4B-207ENST00000591519 KTN1Q86UP2 1357 aaKnown RBP14.79□□□□□ -0.04
VPS4B-207ENST00000591519 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
VPS4B-207ENST00000591519 ZBTB7CA1YPR0 619 aa14.78□□□□□ -0.04
VPS4B-207ENST00000591519 CARD10Q9BWT7 1032 aa14.78□□□□□ -0.04
VPS4B-207ENST00000591519 USP31Q70CQ4 1352 aa14.77□□□□□ -0.04
VPS4B-207ENST00000591519 DDB1Q16531 1140 aa14.77□□□□□ -0.05
VPS4B-207ENST00000591519 PLSCR1O15162 318 aa14.76□□□□□ -0.05
VPS4B-207ENST00000591519 BCL9O00512 1426 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 NBPF14Q5TI25 921 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 SLC12A5Q9H2X9 1139 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 NFAT5O94916 1531 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 CD163L1Q9NR16 1453 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 OVOS2A0A0G2JMS6 1433 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 OVOS2A0A0J9YW53 1432 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 OVOS2Q6IE36 1432 aa14.75□□□□□ -0.05
VPS4B-207ENST00000591519 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
VPS4B-207ENST00000591519 MARCH10Q8NA82 808 aaPredicted RBP14.74□□□□□ -0.05
VPS4B-207ENST00000591519 TSPYL2Q9H2G4 693 aaPredicted RBP14.74□□□□□ -0.05
VPS4B-207ENST00000591519 MON2Q7Z3U7 1717 aa14.74□□□□□ -0.05
VPS4B-207ENST00000591519 RREB1Q92766 1687 aa14.74□□□□□ -0.05
VPS4B-207ENST00000591519 RGPD5Q99666 1765 aa14.73□□□□□ -0.05
VPS4B-207ENST00000591519 ABCC6O95255 1503 aa14.73□□□□□ -0.05
VPS4B-207ENST00000591519 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
VPS4B-207ENST00000591519 HDGFL2Q7Z4V5 671 aaPredicted RBP14.73□□□□□ -0.05
VPS4B-207ENST00000591519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.73□□□□□ -0.05
VPS4B-207ENST00000591519 BCL11BQ9C0K0 894 aaPredicted RBP14.73□□□□□ -0.05
VPS4B-207ENST00000591519 SBF2Q86WG5 1849 aa14.72□□□□□ -0.05
VPS4B-207ENST00000591519 EXOC5O00471 708 aa14.72□□□□□ -0.05
VPS4B-207ENST00000591519 SOX12O15370 315 aa14.72□□□□□ -0.05
VPS4B-207ENST00000591519 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
VPS4B-207ENST00000591519 TMC1Q8TDI8 760 aa14.72□□□□□ -0.05
VPS4B-207ENST00000591519 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
VPS4B-207ENST00000591519 LRRC37A3O60309 1634 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms