RNA–Protein interactions for RNA: ENST00000590852.1

BECN1-216, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-216ENST00000590852 GRIPAP1Q4V328 841 aa10.07□□□□□ -0.8
BECN1-216ENST00000590852 MYOM3Q5VTT5 1437 aa10.07□□□□□ -0.8
BECN1-216ENST00000590852 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
BECN1-216ENST00000590852 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
BECN1-216ENST00000590852 TRAPPC8Q9Y2L5 1435 aa10.07□□□□□ -0.8
BECN1-216ENST00000590852 ATP10AO60312 1499 aa10.06□□□□□ -0.8
BECN1-216ENST00000590852 ZNF518AQ6AHZ1 1483 aa10.06□□□□□ -0.8
BECN1-216ENST00000590852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.06□□□□□ -0.8
BECN1-216ENST00000590852 KDM4AO75164 1064 aa10.06□□□□□ -0.8
BECN1-216ENST00000590852 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
BECN1-216ENST00000590852 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
BECN1-216ENST00000590852 CCNB3Q8WWL7 1395 aa10.05□□□□□ -0.8
BECN1-216ENST00000590852 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
BECN1-216ENST00000590852 FCF1Q9Y324 198 aaKnown RBP10.05□□□□□ -0.8
BECN1-216ENST00000590852 RRBP1Q9P2E9 1410 aaKnown RBP10.05□□□□□ -0.8
BECN1-216ENST00000590852 RPIAP49247 311 aa10.04□□□□□ -0.8
BECN1-216ENST00000590852 KANK4Q5T7N3 995 aaPredicted RBP10.04□□□□□ -0.8
BECN1-216ENST00000590852 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
BECN1-216ENST00000590852 SAMD9LQ8IVG5 1584 aa10.04□□□□□ -0.8
BECN1-216ENST00000590852 PTPN23Q9H3S7 1636 aa10.04□□□□□ -0.8
BECN1-216ENST00000590852 CLCN1P35523 988 aa10.03□□□□□ -0.8
BECN1-216ENST00000590852 CEBPAP49715 358 aaPredicted RBP10.03□□□□□ -0.8
BECN1-216ENST00000590852 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
BECN1-216ENST00000590852 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
BECN1-216ENST00000590852 PLEKHH2Q8IVE3 1493 aa10.03□□□□□ -0.8
BECN1-216ENST00000590852 SYCP2Q9BX26 1530 aa10.02□□□□□ -0.8
BECN1-216ENST00000590852 FGD6Q6ZV73 1430 aa10.02□□□□□ -0.81
BECN1-216ENST00000590852 KIDINS220Q9ULH0 1771 aa10.02□□□□□ -0.81
BECN1-216ENST00000590852 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
BECN1-216ENST00000590852 USP46P62068 366 aa10.02□□□□□ -0.81
BECN1-216ENST00000590852 Q3C1V9 767 aa10.02□□□□□ -0.81
BECN1-216ENST00000590852 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.81
BECN1-216ENST00000590852 HLA-CQ95604 372 aa10.01□□□□□ -0.81
BECN1-216ENST00000590852 ZNF777Q9ULD5 760 aaPredicted RBP10.01□□□□□ -0.81
BECN1-216ENST00000590852 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
BECN1-216ENST00000590852 GPATCH8Q9UKJ3 1502 aaKnown RBP10.01□□□□□ -0.81
BECN1-216ENST00000590852 MLH3Q9UHC1 1453 aa10□□□□□ -0.81
BECN1-216ENST00000590852 HOXA2O43364 376 aa10□□□□□ -0.81
BECN1-216ENST00000590852 ZMYND10O75800 440 aa10□□□□□ -0.81
BECN1-216ENST00000590852 DGAT1O75907 488 aa10□□□□□ -0.81
BECN1-216ENST00000590852 MMP16P51512 607 aa10□□□□□ -0.81
BECN1-216ENST00000590852 BARGINQ6ZT62 677 aa10□□□□□ -0.81
BECN1-216ENST00000590852 REPIN1Q9BWE0 567 aaKnown RBP10□□□□□ -0.81
BECN1-216ENST00000590852 REREQ9P2R6 1566 aa10□□□□□ -0.81
BECN1-216ENST00000590852 CROCC2H7BZ55 1655 aa9.99□□□□□ -0.81
BECN1-216ENST00000590852 MYT1Q01538 1121 aa9.99□□□□□ -0.81
BECN1-216ENST00000590852 ARHGEF5Q12774 1597 aa9.98□□□□□ -0.81
BECN1-216ENST00000590852 DNMT1P26358 1616 aaKnown RBP9.98□□□□□ -0.81
BECN1-216ENST00000590852 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
BECN1-216ENST00000590852 PKDCCQ504Y2 493 aa9.98□□□□□ -0.81
BECN1-216ENST00000590852 USB1Q9BQ65 265 aaKnown RBP9.98□□□□□ -0.81
BECN1-216ENST00000590852 ADGBQ8N7X0 1667 aa9.98□□□□□ -0.81
BECN1-216ENST00000590852 C3P01024 1663 aa9.97□□□□□ -0.81
BECN1-216ENST00000590852 PREX1Q8TCU6 1659 aa9.97□□□□□ -0.81
BECN1-216ENST00000590852 HNRNPMP52272 730 aaKnown RBP eCLIP9.97□□□□□ -0.81
BECN1-216ENST00000590852 CAMSAP2Q08AD1 1489 aa9.97□□□□□ -0.81
BECN1-216ENST00000590852 DXOO77932 396 aaKnown RBP9.96□□□□□ -0.82
BECN1-216ENST00000590852 FOXC1Q12948 553 aa9.96□□□□□ -0.82
BECN1-216ENST00000590852 KRI1Q8N9T8 703 aaKnown RBP9.96□□□□□ -0.82
BECN1-216ENST00000590852 ZC3H15Q8WU90 426 aaKnown RBP9.96□□□□□ -0.82
BECN1-216ENST00000590852 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
BECN1-216ENST00000590852 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.82
BECN1-216ENST00000590852 AGLP35573 1532 aa9.96□□□□□ -0.82
BECN1-216ENST00000590852 INO80Q9ULG1 1556 aaPredicted RBP9.96□□□□□ -0.82
BECN1-216ENST00000590852 FAM187AA6NFU0 413 aa9.95□□□□□ -0.82
BECN1-216ENST00000590852 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
BECN1-216ENST00000590852 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
BECN1-216ENST00000590852 KIAA1107Q9UPP5 1409 aa9.95□□□□□ -0.82
BECN1-216ENST00000590852 SHANK2Q9UPX8 1470 aa9.95□□□□□ -0.82
BECN1-216ENST00000590852 ATP7AQ04656 1500 aa9.95□□□□□ -0.82
BECN1-216ENST00000590852 GUCA2AQ02747 115 aa9.94□□□□□ -0.82
BECN1-216ENST00000590852 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
BECN1-216ENST00000590852 PLXNC1O60486 1568 aa9.93□□□□□ -0.82
BECN1-216ENST00000590852 SPAG9O60271 1321 aaKnown RBP9.93□□□□□ -0.82
BECN1-216ENST00000590852 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
BECN1-216ENST00000590852 AMHR2Q16671 573 aa9.93□□□□□ -0.82
BECN1-216ENST00000590852 ZNF787Q6DD87 383 aa9.93□□□□□ -0.82
BECN1-216ENST00000590852 TOR4AQ9NXH8 423 aa9.93□□□□□ -0.82
BECN1-216ENST00000590852 MAST1Q9Y2H9 1570 aa9.92□□□□□ -0.82
BECN1-216ENST00000590852 ZBTB24O43167 697 aaPredicted RBP9.92□□□□□ -0.82
BECN1-216ENST00000590852 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
BECN1-216ENST00000590852 FBXO41Q8TF61 875 aa9.92□□□□□ -0.82
BECN1-216ENST00000590852 GCC2Q8IWJ2 1684 aa9.92□□□□□ -0.82
BECN1-216ENST00000590852 CCDC141Q6ZP82 1450 aa9.91□□□□□ -0.82
BECN1-216ENST00000590852 UHRF1BP1Q6BDS2 1440 aa9.91□□□□□ -0.82
BECN1-216ENST00000590852 CLTCQ00610 1675 aaKnown RBP9.91□□□□□ -0.82
BECN1-216ENST00000590852 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
BECN1-216ENST00000590852 SYMPKQ92797 1274 aaKnown RBP9.91□□□□□ -0.82
BECN1-216ENST00000590852 A2MP01023 1474 aa9.91□□□□□ -0.82
BECN1-216ENST00000590852 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
BECN1-216ENST00000590852 TRIM32Q13049 653 aa9.9□□□□□ -0.82
BECN1-216ENST00000590852 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.82
BECN1-216ENST00000590852 DAPK1P53355 1430 aa9.9□□□□□ -0.83
BECN1-216ENST00000590852 ROCK1Q13464 1354 aa9.88□□□□□ -0.83
BECN1-216ENST00000590852 MROH2AA6NES4 1674 aa9.88□□□□□ -0.83
BECN1-216ENST00000590852 ADGRL2O95490 1459 aa9.88□□□□□ -0.83
BECN1-216ENST00000590852 WNT7AO00755 349 aa9.88□□□□□ -0.83
BECN1-216ENST00000590852 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
BECN1-216ENST00000590852 SPIRE2Q8WWL2 714 aa9.88□□□□□ -0.83
BECN1-216ENST00000590852 AAASQ9NRG9 546 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms