RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 ST18O60284 1047 aa14.27□□□□□ -0.13
TREM1-206ENST00000589882 TNNT3P45378 269 aaPredicted RBP14.27□□□□□ -0.13
TREM1-206ENST00000589882 CCDC27Q2M243 656 aa14.27□□□□□ -0.13
TREM1-206ENST00000589882 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
TREM1-206ENST00000589882 PAXBP1Q9Y5B6 917 aa14.27□□□□□ -0.13
TREM1-206ENST00000589882 POLR3AO14802 1390 aaPredicted RBP14.26□□□□□ -0.13
TREM1-206ENST00000589882 ZNF397Q8NF99 534 aaPredicted RBP14.26□□□□□ -0.13
TREM1-206ENST00000589882 RBM42Q9BTD8 480 aaKnown RBP14.26□□□□□ -0.13
TREM1-206ENST00000589882 PHF23Q9BUL5 403 aaPredicted RBP14.26□□□□□ -0.13
TREM1-206ENST00000589882 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
TREM1-206ENST00000589882 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
TREM1-206ENST00000589882 C17orf53Q8N3J3 647 aaPredicted RBP14.25□□□□□ -0.13
TREM1-206ENST00000589882 RUNDC1Q96C34 613 aa14.25□□□□□ -0.13
TREM1-206ENST00000589882 USP25Q9UHP3 1055 aa14.25□□□□□ -0.13
TREM1-206ENST00000589882 A2MP01023 1474 aa14.25□□□□□ -0.13
TREM1-206ENST00000589882 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
TREM1-206ENST00000589882 FAM53CQ9NYF3 392 aa14.24□□□□□ -0.13
TREM1-206ENST00000589882 AEBP1Q8IUX7 1158 aa14.23□□□□□ -0.13
TREM1-206ENST00000589882 ITPRIPQ8IWB1 547 aa14.23□□□□□ -0.13
TREM1-206ENST00000589882 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
TREM1-206ENST00000589882 BCL2L13Q9BXK5 485 aa14.23□□□□□ -0.13
TREM1-206ENST00000589882 LNPKQ9C0E8 428 aa14.23□□□□□ -0.13
TREM1-206ENST00000589882 KDM4AO75164 1064 aa14.23□□□□□ -0.13
TREM1-206ENST00000589882 CFDP1Q9UEE9 299 aaPredicted RBP14.23□□□□□ -0.13
TREM1-206ENST00000589882 PLB1Q6P1J6 1458 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 ERICH4A6NGS2 130 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 REC8O95072 547 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 CYP2C19P33261 490 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 CCDC112Q8NEF3 446 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 ZDHHC9Q9Y397 364 aa14.22□□□□□ -0.13
TREM1-206ENST00000589882 CLTCL1P53675 1640 aa14.21□□□□□ -0.13
TREM1-206ENST00000589882 PKP1Q13835 747 aa14.21□□□□□ -0.13
TREM1-206ENST00000589882 CCDC183Q5T5S1 534 aa14.21□□□□□ -0.13
TREM1-206ENST00000589882 RNF20Q5VTR2 975 aa14.21□□□□□ -0.13
TREM1-206ENST00000589882 ZNF622Q969S3 477 aaKnown RBP eCLIP14.21□□□□□ -0.13
TREM1-206ENST00000589882 RASSF4Q9H2L5 321 aa14.21□□□□□ -0.13
TREM1-206ENST00000589882 ZBTB40Q9NUA8 1239 aa14.21□□□□□ -0.13
TREM1-206ENST00000589882 NSFL1CQ9UNZ2 370 aaKnown RBP14.21□□□□□ -0.13
TREM1-206ENST00000589882 ATAD2Q6PL18 1390 aa14.21□□□□□ -0.14
TREM1-206ENST00000589882 BCCIPQ9P287 314 aaKnown RBP eCLIP14.21□□□□□ -0.14
TREM1-206ENST00000589882 HDAC5Q9UQL6 1122 aa14.21□□□□□ -0.14
TREM1-206ENST00000589882 AK9Q5TCS8 1911 aa14.2□□□□□ -0.14
TREM1-206ENST00000589882 ATF7IPQ6VMQ6 1270 aa14.2□□□□□ -0.14
TREM1-206ENST00000589882 CERS3Q8IU89 383 aa14.2□□□□□ -0.14
TREM1-206ENST00000589882 NOL10Q9BSC4 688 aaKnown RBP14.19□□□□□ -0.14
TREM1-206ENST00000589882 SMC4Q9NTJ3 1288 aa14.19□□□□□ -0.14
TREM1-206ENST00000589882 PYCARDQ9ULZ3 195 aa14.19□□□□□ -0.14
TREM1-206ENST00000589882 IPO8O15397 1037 aaKnown RBP14.18□□□□□ -0.14
TREM1-206ENST00000589882 TRIM27P14373 513 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 RAD51AP2Q09MP3 1159 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 MUM1L1Q5H9M0 696 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 IQGAP1P46940 1657 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 C9orf84Q5VXU9 1444 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 IQGAP2Q13576 1575 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
TREM1-206ENST00000589882 MCM2P49736 904 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 PSEN1P49768 467 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 FAM69CQ0P6D2 419 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 TXLNBQ8N3L3 684 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 BRMS1Q9HCU9 246 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 MYOM1P52179 1685 aa14.18□□□□□ -0.14
TREM1-206ENST00000589882 BRD1O95696 1058 aa14.17□□□□□ -0.14
TREM1-206ENST00000589882 APPP05067 770 aa14.17□□□□□ -0.14
TREM1-206ENST00000589882 GTF2A1P52655 376 aaPredicted RBP14.17□□□□□ -0.14
TREM1-206ENST00000589882 HNRNPH2P55795 449 aaKnown RBP14.17□□□□□ -0.14
TREM1-206ENST00000589882 TEX35Q5T0J7 233 aa14.17□□□□□ -0.14
TREM1-206ENST00000589882 KCNF1Q9H3M0 494 aa14.17□□□□□ -0.14
TREM1-206ENST00000589882 TROQ12816 1431 aaPredicted RBP14.17□□□□□ -0.14
TREM1-206ENST00000589882 MYO5CQ9NQX4 1742 aa14.17□□□□□ -0.14
TREM1-206ENST00000589882 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
TREM1-206ENST00000589882 TCP11L2Q8N4U5 519 aa14.16□□□□□ -0.14
TREM1-206ENST00000589882 MPNDQ8N594 471 aa14.16□□□□□ -0.14
TREM1-206ENST00000589882 KIF1BPQ96EK5 621 aa14.16□□□□□ -0.14
TREM1-206ENST00000589882 RSPH14Q9UHP6 348 aa14.16□□□□□ -0.14
TREM1-206ENST00000589882 GPATCH8Q9UKJ3 1502 aaKnown RBP14.16□□□□□ -0.14
TREM1-206ENST00000589882 ADGRL1O94910 1474 aa14.16□□□□□ -0.14
TREM1-206ENST00000589882 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
TREM1-206ENST00000589882 BMS1Q14692 1282 aaKnown RBP14.16□□□□□ -0.14
TREM1-206ENST00000589882 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
TREM1-206ENST00000589882 MYCBPQ99417 103 aaPredicted RBP14.16□□□□□ -0.14
TREM1-206ENST00000589882 KDM5AP29375 1690 aaKnown RBP14.15□□□□□ -0.14
TREM1-206ENST00000589882 NOP2P46087 812 aaKnown RBP14.15□□□□□ -0.14
TREM1-206ENST00000589882 ANKRD45Q5TZF3 282 aa14.15□□□□□ -0.14
TREM1-206ENST00000589882 INTS3Q68E01 1043 aaKnown RBP14.15□□□□□ -0.14
TREM1-206ENST00000589882 USP26Q9BXU7 913 aa14.15□□□□□ -0.14
TREM1-206ENST00000589882 RAD50Q92878 1312 aa14.15□□□□□ -0.14
TREM1-206ENST00000589882 SHPRHQ149N8 1683 aa14.15□□□□□ -0.14
TREM1-206ENST00000589882 SOX12O15370 315 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 TNNT1P13805 278 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 MX1P20591 662 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 GOLGA6L1Q8N7Z2 621 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 TMEM87AQ8NBN3 555 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 SENP3Q9H4L4 574 aaPredicted RBP14.14□□□□□ -0.15
TREM1-206ENST00000589882 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
TREM1-206ENST00000589882 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.14□□□□□ -0.15
TREM1-206ENST00000589882 TSPOAP1O95153 1857 aa14.14□□□□□ -0.15
TREM1-206ENST00000589882 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
TREM1-206ENST00000589882 ATP10AO60312 1499 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms