RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 CARD14Q9BXL6 1004 aa34.32■■■■□ 3.08
CIRBP-223ENST00000589266 USP35Q9P2H5 1018 aa34.32■■■■□ 3.08
CIRBP-223ENST00000589266 EVA1CP58658 441 aa34.31■■■■□ 3.08
CIRBP-223ENST00000589266 ZC3H6P61129 1189 aaKnown RBP34.31■■■■□ 3.08
CIRBP-223ENST00000589266 NBPF14Q5TI25 921 aa34.3■■■■□ 3.08
CIRBP-223ENST00000589266 BARGINQ6ZT62 677 aa34.29■■■■□ 3.08
CIRBP-223ENST00000589266 KNSTRNQ9Y448 316 aa34.29■■■■□ 3.08
CIRBP-223ENST00000589266 SSH2Q76I76 1423 aa34.29■■■■□ 3.08
CIRBP-223ENST00000589266 NSD3Q9BZ95 1437 aa34.29■■■■□ 3.08
CIRBP-223ENST00000589266 YY1P25490 414 aa34.28■■■■□ 3.08
CIRBP-223ENST00000589266 NPC1L1Q9UHC9 1359 aa34.26■■■■□ 3.08
CIRBP-223ENST00000589266 NUTM2GQ5VZR2 741 aa34.26■■■■□ 3.08
CIRBP-223ENST00000589266 NRKQ7Z2Y5 1582 aa34.26■■■■□ 3.07
CIRBP-223ENST00000589266 PHRF1Q9P1Y6 1649 aaKnown RBP34.26■■■■□ 3.07
CIRBP-223ENST00000589266 RREB1Q92766 1687 aa34.24■■■■□ 3.07
CIRBP-223ENST00000589266 CGNL1Q0VF96 1302 aa34.24■■■■□ 3.07
CIRBP-223ENST00000589266 TTC21AQ8NDW8 1320 aa34.24■■■■□ 3.07
CIRBP-223ENST00000589266 NSD2O96028 1365 aa34.22■■■■□ 3.07
CIRBP-223ENST00000589266 TCP11L2Q8N4U5 519 aa34.21■■■■□ 3.07
CIRBP-223ENST00000589266 TTC21BQ7Z4L5 1316 aa34.21■■■■□ 3.07
CIRBP-223ENST00000589266 AMER1Q5JTC6 1135 aaPredicted RBP34.2■■■■□ 3.07
CIRBP-223ENST00000589266 NUP188Q5SRE5 1749 aa34.2■■■■□ 3.07
CIRBP-223ENST00000589266 DIEXFQ68CQ4 756 aaKnown RBP34.19■■■■□ 3.06
CIRBP-223ENST00000589266 LARP1Q6PKG0 1096 aaKnown RBP34.19■■■■□ 3.06
CIRBP-223ENST00000589266 SPON1Q9HCB6 807 aa34.18■■■■□ 3.06
CIRBP-223ENST00000589266 PPP1R1BQ9UD71 204 aaPredicted RBP34.18■■■■□ 3.06
CIRBP-223ENST00000589266 CAMTA1Q9Y6Y1 1673 aa34.15■■■■□ 3.06
CIRBP-223ENST00000589266 DCAF8L1A6NGE4 600 aa34.15■■■■□ 3.06
CIRBP-223ENST00000589266 THRAP3Q9Y2W1 955 aaKnown RBP34.15■■■■□ 3.06
CIRBP-223ENST00000589266 ABTB2Q8N961 1025 aa34.14■■■■□ 3.06
CIRBP-223ENST00000589266 KIF20BQ96Q89 1820 aa34.14■■■■□ 3.06
CIRBP-223ENST00000589266 KCNQ2O43526 872 aa34.13■■■■□ 3.05
CIRBP-223ENST00000589266 CPDO75976 1380 aa34.12■■■■□ 3.05
CIRBP-223ENST00000589266 FYB1O15117 783 aa34.12■■■■□ 3.05
CIRBP-223ENST00000589266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.12■■■■□ 3.05
CIRBP-223ENST00000589266 USP31Q70CQ4 1352 aa34.11■■■■□ 3.05
CIRBP-223ENST00000589266 ANKRD26Q9UPS8 1709 aa34.08■■■■□ 3.05
CIRBP-223ENST00000589266 USP54Q70EL1 1684 aa34.08■■■■□ 3.05
CIRBP-223ENST00000589266 LMO7Q8WWI1 1683 aa34.07■■■■□ 3.04
CIRBP-223ENST00000589266 USP19O94966 1318 aa34.06■■■■□ 3.04
CIRBP-223ENST00000589266 PIK3C2AO00443 1686 aa34.06■■■■□ 3.04
CIRBP-223ENST00000589266 NME9Q86XW9 330 aa34.06■■■■□ 3.04
CIRBP-223ENST00000589266 NLRP13Q86W25 1043 aa34.05■■■■□ 3.04
CIRBP-223ENST00000589266 ANP32CO43423 234 aa34.04■■■■□ 3.04
CIRBP-223ENST00000589266 GCP02774 474 aa34.04■■■■□ 3.04
CIRBP-223ENST00000589266 RALBP1Q15311 655 aa34.04■■■■□ 3.04
CIRBP-223ENST00000589266 PARP4Q9UKK3 1724 aaKnown RBP34.04■■■■□ 3.04
CIRBP-223ENST00000589266 CC2D1BQ5T0F9 858 aaKnown RBP34.03■■■■□ 3.04
CIRBP-223ENST00000589266 OVOS2A0A0J9YW53 1432 aa34.03■■■■□ 3.04
CIRBP-223ENST00000589266 OVOS2Q6IE36 1432 aa34.03■■■■□ 3.04
CIRBP-223ENST00000589266 COG3Q96JB2 828 aa34.02■■■■□ 3.04
CIRBP-223ENST00000589266 GGNBP2Q9H3C7 697 aa34.02■■■■□ 3.04
CIRBP-223ENST00000589266 PRKRIP1Q9H875 184 aaPredicted RBP34.01■■■■□ 3.03
CIRBP-223ENST00000589266 OVOS2A0A0G2JMS6 1433 aa34■■■■□ 3.03
CIRBP-223ENST00000589266 COL5A2P05997 1499 aaPredicted RBP34■■■■□ 3.03
CIRBP-223ENST00000589266 PLSCR1O15162 318 aa33.99■■■■□ 3.03
CIRBP-223ENST00000589266 CRB1P82279 1406 aa33.98■■■■□ 3.03
CIRBP-223ENST00000589266 NLRP6P59044 892 aa33.98■■■■□ 3.03
CIRBP-223ENST00000589266 MORC1Q86VD1 984 aa33.98■■■■□ 3.03
CIRBP-223ENST00000589266 RGPD3A6NKT7 1758 aaPredicted RBP33.94■■■■□ 3.02
CIRBP-223ENST00000589266 RGPD4Q7Z3J3 1758 aa33.94■■■■□ 3.02
CIRBP-223ENST00000589266 DDB1Q16531 1140 aa33.94■■■■□ 3.02
CIRBP-223ENST00000589266 ZBTB7CA1YPR0 619 aa33.93■■■■□ 3.02
CIRBP-223ENST00000589266 PEAK1Q9H792 1746 aa33.93■■■■□ 3.02
CIRBP-223ENST00000589266 SBF2Q86WG5 1849 aa33.92■■■■□ 3.02
CIRBP-223ENST00000589266 BCL11BQ9C0K0 894 aaPredicted RBP33.91■■■■□ 3.02
CIRBP-223ENST00000589266 ANO8Q9HCE9 1232 aaPredicted RBP33.91■■■■□ 3.02
CIRBP-223ENST00000589266 SLIT3O75094 1523 aa33.9■■■■□ 3.02
CIRBP-223ENST00000589266 AATKQ6ZMQ8 1374 aa33.9■■■■□ 3.02
CIRBP-223ENST00000589266 KCNH5Q8NCM2 988 aa33.89■■■■□ 3.02
CIRBP-223ENST00000589266 TOM1L2Q6ZVM7 507 aa33.88■■■■□ 3.01
CIRBP-223ENST00000589266 MYBBP1AQ9BQG0 1328 aaKnown RBP33.87■■■■□ 3.01
CIRBP-223ENST00000589266 CNGB1Q14028 1251 aaPredicted RBP33.87■■■■□ 3.01
CIRBP-223ENST00000589266 CASZ1Q86V15 1759 aa33.85■■■■□ 3.01
CIRBP-223ENST00000589266 PTF1AQ7RTS3 328 aa33.85■■■■□ 3.01
CIRBP-223ENST00000589266 LRRC37A3O60309 1634 aa33.85■■■■□ 3.01
CIRBP-223ENST00000589266 PROM2Q8N271 834 aa33.83■■■■□ 3.01
CIRBP-223ENST00000589266 PDGFDQ9GZP0 370 aaPredicted RBP33.83■■■■□ 3.01
CIRBP-223ENST00000589266 ZBTB7AO95365 584 aa33.82■■■■□ 3
CIRBP-223ENST00000589266 PPP2R1AP30153 589 aa33.82■■■■□ 3
CIRBP-223ENST00000589266 CDCA7Q9BWT1 371 aaPredicted RBP33.81■■■■□ 3
CIRBP-223ENST00000589266 NFAT5O94916 1531 aa33.8■■■■□ 3
CIRBP-223ENST00000589266 MARCH10Q8NA82 808 aaPredicted RBP33.8■■■■□ 3
CIRBP-223ENST00000589266 BCL9O00512 1426 aa33.79■■■■□ 3
CIRBP-223ENST00000589266 WDR17Q8IZU2 1322 aa33.79■■■■□ 3
CIRBP-223ENST00000589266 SMG6Q86US8 1419 aaKnown RBP33.78■■■■□ 3
CIRBP-223ENST00000589266 KIF24Q5T7B8 1368 aa33.77■■■■□ 3
CIRBP-223ENST00000589266 PTGER2P43116 358 aa33.77■■■■□ 3
CIRBP-223ENST00000589266 TNNT2P45379 298 aaPredicted RBP33.77■■■■□ 3
CIRBP-223ENST00000589266 ATF5Q9Y2D1 282 aaPredicted RBP33.77■■■■□ 3
CIRBP-223ENST00000589266 MAP2P11137 1827 aaKnown RBP33.76■■■■□ 3
CIRBP-223ENST00000589266 MIER1Q8N108 512 aa33.76■■■□□ 2.99
CIRBP-223ENST00000589266 STK32BQ9NY57 414 aa33.76■■■□□ 2.99
CIRBP-223ENST00000589266 AXIN2Q9Y2T1 843 aa33.76■■■□□ 2.99
CIRBP-223ENST00000589266 ZNF784Q8NCA9 323 aaPredicted RBP33.75■■■□□ 2.99
CIRBP-223ENST00000589266 COL18A1P39060 1754 aa33.75■■■□□ 2.99
CIRBP-223ENST00000589266 CCER2I3L3R5 266 aa33.74■■■□□ 2.99
CIRBP-223ENST00000589266 TXNRD1Q16881 649 aa33.74■■■□□ 2.99
CIRBP-223ENST00000589266 POLKQ9UBT6 870 aa33.74■■■□□ 2.99
CIRBP-223ENST00000589266 WNK3Q9BYP7 1800 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms