RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 BTG4Q9NY30 223 aa25.87■■□□□ 1.73
CLPTM1-209ENST00000588855 USP21Q9UK80 565 aa25.85■■□□□ 1.73
CLPTM1-209ENST00000588855 RGS17Q9UGC6 210 aaPredicted RBP25.84■■□□□ 1.73
CLPTM1-209ENST00000588855 AXIN2Q9Y2T1 843 aa25.83■■□□□ 1.73
CLPTM1-209ENST00000588855 EMILIN1Q9Y6C2 1016 aa25.83■■□□□ 1.72
CLPTM1-209ENST00000588855 COL5A2P05997 1499 aaPredicted RBP25.82■■□□□ 1.72
CLPTM1-209ENST00000588855 RTL1A6NKG5 1358 aa25.82■■□□□ 1.72
CLPTM1-209ENST00000588855 UNC5CLQ8IV45 518 aa25.81■■□□□ 1.72
CLPTM1-209ENST00000588855 SMG6Q86US8 1419 aaKnown RBP25.79■■□□□ 1.72
CLPTM1-209ENST00000588855 HOXC9P31274 260 aa25.79■■□□□ 1.72
CLPTM1-209ENST00000588855 AMPHP49418 695 aa25.79■■□□□ 1.72
CLPTM1-209ENST00000588855 ZNF772Q68DY9 489 aaPredicted RBP25.79■■□□□ 1.72
CLPTM1-209ENST00000588855 POLKQ9UBT6 870 aa25.79■■□□□ 1.72
CLPTM1-209ENST00000588855 IP6K1Q92551 441 aa25.78■■□□□ 1.72
CLPTM1-209ENST00000588855 ATRNO75882 1429 aa25.78■■□□□ 1.72
CLPTM1-209ENST00000588855 BLMP54132 1417 aaPredicted RBP25.78■■□□□ 1.72
CLPTM1-209ENST00000588855 FLT4P35916 1363 aa25.78■■□□□ 1.72
CLPTM1-209ENST00000588855 STRN4Q9NRL3 753 aa25.78■■□□□ 1.72
CLPTM1-209ENST00000588855 KIF24Q5T7B8 1368 aa25.77■■□□□ 1.72
CLPTM1-209ENST00000588855 PARD3Q8TEW0 1356 aa25.77■■□□□ 1.72
CLPTM1-209ENST00000588855 PPM1GO15355 546 aaPredicted RBP25.77■■□□□ 1.72
CLPTM1-209ENST00000588855 POTEAQ6S8J7 498 aa25.74■■□□□ 1.71
CLPTM1-209ENST00000588855 TRPC5Q9UL62 973 aaPredicted RBP25.74■■□□□ 1.71
CLPTM1-209ENST00000588855 CDK12Q9NYV4 1490 aaPredicted RBP25.74■■□□□ 1.71
CLPTM1-209ENST00000588855 EVA1CP58658 441 aa25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 HSP90AB2PQ58FF8 381 aa25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 QTRT2Q9H974 415 aaKnown RBP25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 FAM208AQ9UK61 1670 aaKnown RBP25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 ERBB3P21860 1342 aa25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 GLI3P10071 1580 aa25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 VPS72Q15906 364 aa25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 LARP1Q6PKG0 1096 aaKnown RBP25.73■■□□□ 1.71
CLPTM1-209ENST00000588855 INSRP06213 1382 aa25.72■■□□□ 1.71
CLPTM1-209ENST00000588855 RGPD2P0DJD1 1756 aa25.72■■□□□ 1.71
CLPTM1-209ENST00000588855 ANKRD24Q8TF21 1146 aa25.72■■□□□ 1.71
CLPTM1-209ENST00000588855 WDR17Q8IZU2 1322 aa25.71■■□□□ 1.71
CLPTM1-209ENST00000588855 LTV1Q96GA3 475 aaPredicted RBP25.71■■□□□ 1.71
CLPTM1-209ENST00000588855 CCDC9Q9Y3X0 531 aaKnown RBP25.7■■□□□ 1.7
CLPTM1-209ENST00000588855 CRB1P82279 1406 aa25.7■■□□□ 1.7
CLPTM1-209ENST00000588855 CSB-PGBD3P0DP91 1061 aa25.69■■□□□ 1.7
CLPTM1-209ENST00000588855 PPP2R1AP30153 589 aa25.69■■□□□ 1.7
CLPTM1-209ENST00000588855 MTHFSP49914 203 aa25.69■■□□□ 1.7
CLPTM1-209ENST00000588855 SPATA31A5Q5VU36 1347 aa25.68■■□□□ 1.7
CLPTM1-209ENST00000588855 SPATA31A7Q8IWB4 1347 aa25.68■■□□□ 1.7
CLPTM1-209ENST00000588855 GJD4Q96KN9 370 aaPredicted RBP25.68■■□□□ 1.7
CLPTM1-209ENST00000588855 RALBP1Q15311 655 aa25.67■■□□□ 1.7
CLPTM1-209ENST00000588855 TOM1L2Q6ZVM7 507 aa25.67■■□□□ 1.7
CLPTM1-209ENST00000588855 SPATA31A1Q5TZJ5 1347 aa25.66■■□□□ 1.7
CLPTM1-209ENST00000588855 WNK3Q9BYP7 1800 aa25.66■■□□□ 1.7
CLPTM1-209ENST00000588855 PRKRIP1Q9H875 184 aaPredicted RBP25.65■■□□□ 1.7
CLPTM1-209ENST00000588855 USP35Q9P2H5 1018 aa25.65■■□□□ 1.7
CLPTM1-209ENST00000588855 COL3A1P02461 1466 aaPredicted RBP25.63■■□□□ 1.69
CLPTM1-209ENST00000588855 RBM6P78332 1123 aaKnown RBP25.63■■□□□ 1.69
CLPTM1-209ENST00000588855 EIF4A2Q14240 407 aaKnown RBP25.63■■□□□ 1.69
CLPTM1-209ENST00000588855 NLRP2Q9NX02 1062 aa25.63■■□□□ 1.69
CLPTM1-209ENST00000588855 RXRBP28702 533 aa25.62■■□□□ 1.69
CLPTM1-209ENST00000588855 CARD10Q9BWT7 1032 aa25.61■■□□□ 1.69
CLPTM1-209ENST00000588855 MYBBP1AQ9BQG0 1328 aaKnown RBP25.6■■□□□ 1.69
CLPTM1-209ENST00000588855 TCP11L2Q8N4U5 519 aa25.59■■□□□ 1.69
CLPTM1-209ENST00000588855 THSD7AQ9UPZ6 1657 aa25.59■■□□□ 1.69
CLPTM1-209ENST00000588855 RGPD1P0DJD0 1748 aa25.59■■□□□ 1.69
CLPTM1-209ENST00000588855 NBPF6Q5VWK0 638 aa25.58■■□□□ 1.69
CLPTM1-209ENST00000588855 NBPF4Q96M43 638 aa25.58■■□□□ 1.69
CLPTM1-209ENST00000588855 FAM98CQ17RN3 349 aaKnown RBP25.58■■□□□ 1.68
CLPTM1-209ENST00000588855 RGS12O14924 1447 aa25.57■■□□□ 1.68
CLPTM1-209ENST00000588855 USHBP1Q8N6Y0 703 aa25.57■■□□□ 1.68
CLPTM1-209ENST00000588855 ANP32CO43423 234 aa25.56■■□□□ 1.68
CLPTM1-209ENST00000588855 IL13P35225 146 aa25.56■■□□□ 1.68
CLPTM1-209ENST00000588855 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
CLPTM1-209ENST00000588855 EYA1Q99502 592 aa25.55■■□□□ 1.68
CLPTM1-209ENST00000588855 NCAPD2Q15021 1401 aa25.55■■□□□ 1.68
CLPTM1-209ENST00000588855 BARGINQ6ZT62 677 aa25.54■■□□□ 1.68
CLPTM1-209ENST00000588855 CFAP53Q96M91 514 aa25.54■■□□□ 1.68
CLPTM1-209ENST00000588855 PARP4Q9UKK3 1724 aaKnown RBP25.54■■□□□ 1.68
CLPTM1-209ENST00000588855 DISP2A7MBM2 1401 aa25.54■■□□□ 1.68
CLPTM1-209ENST00000588855 BRWD3Q6RI45 1802 aa25.54■■□□□ 1.68
CLPTM1-209ENST00000588855 DIAPH1O60610 1272 aaKnown RBP25.53■■□□□ 1.68
CLPTM1-209ENST00000588855 IGSF1Q8N6C5 1336 aa25.53■■□□□ 1.68
CLPTM1-209ENST00000588855 LRRC37A3O60309 1634 aa25.52■■□□□ 1.68
CLPTM1-209ENST00000588855 ONECUT3O60422 494 aaPredicted RBP25.52■■□□□ 1.68
CLPTM1-209ENST00000588855 A0A0G2JS52 829 aa25.51■■□□□ 1.67
CLPTM1-209ENST00000588855 MYT1Q01538 1121 aa25.51■■□□□ 1.67
CLPTM1-209ENST00000588855 MEGF6O75095 1541 aa25.5■■□□□ 1.67
CLPTM1-209ENST00000588855 SEPT12Q8IYM1 358 aa25.49■■□□□ 1.67
CLPTM1-209ENST00000588855 IL2RBP14784 551 aa25.47■■□□□ 1.67
CLPTM1-209ENST00000588855 DIEXFQ68CQ4 756 aaKnown RBP25.47■■□□□ 1.67
CLPTM1-209ENST00000588855 AEBP1Q8IUX7 1158 aa25.46■■□□□ 1.67
CLPTM1-209ENST00000588855 CDCA7Q9BWT1 371 aaPredicted RBP25.46■■□□□ 1.67
CLPTM1-209ENST00000588855 U2SURPO15042 1029 aaKnown RBP25.45■■□□□ 1.66
CLPTM1-209ENST00000588855 OVOS2A0A0G2JMS6 1433 aa25.44■■□□□ 1.66
CLPTM1-209ENST00000588855 SULT6B1Q6IMI4 303 aa25.44■■□□□ 1.66
CLPTM1-209ENST00000588855 SHANK3Q9BYB0 1731 aa25.44■■□□□ 1.66
CLPTM1-209ENST00000588855 KDRP35968 1356 aa25.44■■□□□ 1.66
CLPTM1-209ENST00000588855 TNS2Q63HR2 1409 aa25.43■■□□□ 1.66
CLPTM1-209ENST00000588855 ILDR2Q71H61 639 aa25.43■■□□□ 1.66
CLPTM1-209ENST00000588855 RAPGEF4Q8WZA2 1011 aa25.43■■□□□ 1.66
CLPTM1-209ENST00000588855 PKD1L3Q7Z443 1732 aa25.43■■□□□ 1.66
CLPTM1-209ENST00000588855 NUDCQ9Y266 331 aa25.42■■□□□ 1.66
CLPTM1-209ENST00000588855 HMOX1P09601 288 aa25.42■■□□□ 1.66
CLPTM1-209ENST00000588855 EP400Q96L91 3159 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms