RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 VAMP4O75379 141 aa20.7■□□□□ 0.9
SSC5D-203ENST00000588254 DNTTIP2Q5QJE6 756 aaKnown RBP20.7■□□□□ 0.9
SSC5D-203ENST00000588254 PLEKHM2Q8IWE5 1019 aa20.7■□□□□ 0.9
SSC5D-203ENST00000588254 TWISTNBQ3B726 338 aaPredicted RBP20.69■□□□□ 0.9
SSC5D-203ENST00000588254 MRPL50Q8N5N7 158 aaKnown RBP20.69■□□□□ 0.9
SSC5D-203ENST00000588254 PRAM1Q96QH2 718 aa20.69■□□□□ 0.9
SSC5D-203ENST00000588254 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
SSC5D-203ENST00000588254 TMEM63CQ9P1W3 806 aa20.69■□□□□ 0.9
SSC5D-203ENST00000588254 ZNF830Q96NB3 372 aaPredicted RBP20.69■□□□□ 0.9
SSC5D-203ENST00000588254 ZFYVE16Q7Z3T8 1539 aa20.69■□□□□ 0.9
SSC5D-203ENST00000588254 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
SSC5D-203ENST00000588254 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
SSC5D-203ENST00000588254 PLCB2Q00722 1185 aa20.68■□□□□ 0.9
SSC5D-203ENST00000588254 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
SSC5D-203ENST00000588254 ZRANB1Q9UGI0 708 aa20.67■□□□□ 0.9
SSC5D-203ENST00000588254 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.67■□□□□ 0.9
SSC5D-203ENST00000588254 SOX12O15370 315 aa20.66■□□□□ 0.9
SSC5D-203ENST00000588254 RABEP1Q15276 862 aa20.66■□□□□ 0.9
SSC5D-203ENST00000588254 SBNO2Q9Y2G9 1366 aa20.66■□□□□ 0.9
SSC5D-203ENST00000588254 SDSP20132 328 aa20.66■□□□□ 0.9
SSC5D-203ENST00000588254 C17orf53Q8N3J3 647 aaPredicted RBP20.65■□□□□ 0.9
SSC5D-203ENST00000588254 QRICH2Q9H0J4 1663 aa20.65■□□□□ 0.9
SSC5D-203ENST00000588254 NUCB2P80303 420 aa20.65■□□□□ 0.9
SSC5D-203ENST00000588254 ALDH1L2Q3SY69 923 aa20.65■□□□□ 0.9
SSC5D-203ENST00000588254 USP26Q9BXU7 913 aa20.65■□□□□ 0.9
SSC5D-203ENST00000588254 PTMSP20962 102 aa20.64■□□□□ 0.9
SSC5D-203ENST00000588254 ZDHHC9Q9Y397 364 aa20.64■□□□□ 0.9
SSC5D-203ENST00000588254 MYOM2P54296 1465 aa20.64■□□□□ 0.89
SSC5D-203ENST00000588254 NEK4P51957 841 aa20.64■□□□□ 0.89
SSC5D-203ENST00000588254 SLC4A10Q6U841 1118 aa20.64■□□□□ 0.89
SSC5D-203ENST00000588254 TERF2IPQ9NYB0 399 aa20.64■□□□□ 0.89
SSC5D-203ENST00000588254 TET3O43151 1660 aa20.64■□□□□ 0.89
SSC5D-203ENST00000588254 FANCAO15360 1455 aa20.63■□□□□ 0.89
SSC5D-203ENST00000588254 TTC22Q5TAA0 569 aa20.63■□□□□ 0.89
SSC5D-203ENST00000588254 RRS1Q15050 365 aaKnown RBP20.63■□□□□ 0.89
SSC5D-203ENST00000588254 ST18O60284 1047 aa20.62■□□□□ 0.89
SSC5D-203ENST00000588254 ATP7AQ04656 1500 aa20.62■□□□□ 0.89
SSC5D-203ENST00000588254 LARP6Q9BRS8 491 aaKnown RBP20.62■□□□□ 0.89
SSC5D-203ENST00000588254 ZNF445P59923 1031 aa20.62■□□□□ 0.89
SSC5D-203ENST00000588254 KIF1BO60333 1816 aa20.61■□□□□ 0.89
SSC5D-203ENST00000588254 ZHX1Q9UKY1 873 aaPredicted RBP20.61■□□□□ 0.89
SSC5D-203ENST00000588254 INTS3Q68E01 1043 aaKnown RBP20.61■□□□□ 0.89
SSC5D-203ENST00000588254 MIS18AQ9NYP9 233 aa20.61■□□□□ 0.89
SSC5D-203ENST00000588254 NOL7Q9UMY1 257 aaKnown RBP20.61■□□□□ 0.89
SSC5D-203ENST00000588254 UPF3BQ9BZI7 483 aaKnown RBP20.6■□□□□ 0.89
SSC5D-203ENST00000588254 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
SSC5D-203ENST00000588254 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
SSC5D-203ENST00000588254 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
SSC5D-203ENST00000588254 IL16Q14005 1332 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 BCL11BQ9C0K0 894 aaPredicted RBP20.59■□□□□ 0.89
SSC5D-203ENST00000588254 SHROOM2Q13796 1616 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 NFE2L2Q16236 605 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 MEIS3Q99687 375 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 POLKQ9UBT6 870 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 ZKSCAN5Q9Y2L8 839 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 CFAP74Q9C0B2 1584 aa20.59■□□□□ 0.89
SSC5D-203ENST00000588254 CDK19Q9BWU1 502 aa20.58■□□□□ 0.88
SSC5D-203ENST00000588254 VGFO15240 615 aaPredicted RBP20.57■□□□□ 0.88
SSC5D-203ENST00000588254 FCHSD2O94868 740 aa20.57■□□□□ 0.88
SSC5D-203ENST00000588254 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
SSC5D-203ENST00000588254 NPATQ14207 1427 aa20.57■□□□□ 0.88
SSC5D-203ENST00000588254 F6X3S4 739 aa20.57■□□□□ 0.88
SSC5D-203ENST00000588254 CASC1Q6TDU7 716 aa20.57■□□□□ 0.88
SSC5D-203ENST00000588254 EXOC6BQ9Y2D4 811 aa20.57■□□□□ 0.88
SSC5D-203ENST00000588254 ADGRB2O60241 1585 aa20.56■□□□□ 0.88
SSC5D-203ENST00000588254 GNAI1P63096 354 aa20.56■□□□□ 0.88
SSC5D-203ENST00000588254 NECTIN2Q92692 538 aa20.56■□□□□ 0.88
SSC5D-203ENST00000588254 RILPL2Q969X0 211 aa20.56■□□□□ 0.88
SSC5D-203ENST00000588254 ZCCHC11Q5TAX3 1644 aaKnown RBP20.56■□□□□ 0.88
SSC5D-203ENST00000588254 NCKAP5LQ9HCH0 1330 aa20.56■□□□□ 0.88
SSC5D-203ENST00000588254 KIAA1210Q9ULL0 1709 aa20.55■□□□□ 0.88
SSC5D-203ENST00000588254 GADD45BO75293 160 aaPredicted RBP20.55■□□□□ 0.88
SSC5D-203ENST00000588254 IDI1Q13907 227 aa20.55■□□□□ 0.88
SSC5D-203ENST00000588254 LRSAM1Q6UWE0 723 aa20.55■□□□□ 0.88
SSC5D-203ENST00000588254 MCM10Q7L590 875 aa20.55■□□□□ 0.88
SSC5D-203ENST00000588254 NME9Q86XW9 330 aa20.55■□□□□ 0.88
SSC5D-203ENST00000588254 CYP2E1P05181 493 aaPredicted RBP20.55■□□□□ 0.88
SSC5D-203ENST00000588254 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
SSC5D-203ENST00000588254 TRIM6-TRIM34B2RNG4 842 aa20.54■□□□□ 0.88
SSC5D-203ENST00000588254 ANO2Q9NQ90 1003 aa20.54■□□□□ 0.88
SSC5D-203ENST00000588254 PALD1Q9ULE6 856 aa20.54■□□□□ 0.88
SSC5D-203ENST00000588254 DCTPP1Q9H773 170 aa20.54■□□□□ 0.88
SSC5D-203ENST00000588254 TTC12Q9H892 705 aaPredicted RBP20.54■□□□□ 0.88
SSC5D-203ENST00000588254 NSD2O96028 1365 aa20.54■□□□□ 0.88
SSC5D-203ENST00000588254 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
SSC5D-203ENST00000588254 USP25Q9UHP3 1055 aa20.53■□□□□ 0.88
SSC5D-203ENST00000588254 ABCC4O15439 1325 aa20.53■□□□□ 0.88
SSC5D-203ENST00000588254 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
SSC5D-203ENST00000588254 API5Q9BZZ5 524 aaKnown RBP20.53■□□□□ 0.88
SSC5D-203ENST00000588254 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.53■□□□□ 0.88
SSC5D-203ENST00000588254 PPRC1Q5VV67 1664 aaKnown RBP20.52■□□□□ 0.88
SSC5D-203ENST00000588254 ADGRB1O14514 1584 aa20.52■□□□□ 0.88
SSC5D-203ENST00000588254 PDLIM2Q96JY6 352 aa20.52■□□□□ 0.88
SSC5D-203ENST00000588254 RAPGEF3O95398 923 aa20.52■□□□□ 0.87
SSC5D-203ENST00000588254 MAP4K4O95819 1239 aaPredicted RBP20.52■□□□□ 0.87
SSC5D-203ENST00000588254 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.87
SSC5D-203ENST00000588254 LRRC7Q96NW7 1537 aa20.51■□□□□ 0.87
SSC5D-203ENST00000588254 CHMP4BQ9H444 224 aaKnown RBP20.51■□□□□ 0.87
SSC5D-203ENST00000588254 CEP85Q6P2H3 762 aa20.51■□□□□ 0.87
SSC5D-203ENST00000588254 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms