RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 GLI2P10070 1586 aa23.11■■□□□ 1.29
PKN1-204ENST00000585839 METP08581 1390 aa23.11■■□□□ 1.29
PKN1-204ENST00000585839 EIF4A2Q14240 407 aaKnown RBP23.1■■□□□ 1.29
PKN1-204ENST00000585839 RILPL2Q969X0 211 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 ADGRB1O14514 1584 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 NSD2O96028 1365 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 TRIM6-TRIM34B2RNG4 842 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 CHAMP1Q96JM3 812 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 NLRP6P59044 892 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 XPCQ01831 940 aaPredicted RBP23.09■■□□□ 1.29
PKN1-204ENST00000585839 SIRT2Q8IXJ6 389 aa23.09■■□□□ 1.29
PKN1-204ENST00000585839 ACEP12821 1306 aa23.08■■□□□ 1.29
PKN1-204ENST00000585839 MAP4K4O95819 1239 aaPredicted RBP23.08■■□□□ 1.29
PKN1-204ENST00000585839 G2E3Q7L622 706 aa23.08■■□□□ 1.28
PKN1-204ENST00000585839 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.08■■□□□ 1.28
PKN1-204ENST00000585839 FKBP5Q13451 457 aaPredicted RBP23.07■■□□□ 1.28
PKN1-204ENST00000585839 API5Q9BZZ5 524 aaKnown RBP23.07■■□□□ 1.28
PKN1-204ENST00000585839 MLH3Q9UHC1 1453 aa23.06■■□□□ 1.28
PKN1-204ENST00000585839 RIMS2Q9UQ26 1411 aa23.06■■□□□ 1.28
PKN1-204ENST00000585839 VWDEQ8N2E2 1590 aa23.06■■□□□ 1.28
PKN1-204ENST00000585839 CT47B1P0C2W7 299 aaPredicted RBP23.05■■□□□ 1.28
PKN1-204ENST00000585839 FRMPD1Q5SYB0 1578 aa23.05■■□□□ 1.28
PKN1-204ENST00000585839 CFAP44Q96MT7 982 aa23.05■■□□□ 1.28
PKN1-204ENST00000585839 LMOD3Q0VAK6 560 aa23.05■■□□□ 1.28
PKN1-204ENST00000585839 SSFA2P28290 1259 aa23.04■■□□□ 1.28
PKN1-204ENST00000585839 IFT57Q9NWB7 429 aa23.04■■□□□ 1.28
PKN1-204ENST00000585839 ALDH1L2Q3SY69 923 aa23.04■■□□□ 1.28
PKN1-204ENST00000585839 ANTXR1Q9H6X2 564 aa23.04■■□□□ 1.28
PKN1-204ENST00000585839 DEPDC5O75140 1603 aa23.04■■□□□ 1.28
PKN1-204ENST00000585839 ANXA1P04083 346 aa23.03■■□□□ 1.28
PKN1-204ENST00000585839 NAP1L5Q96NT1 182 aaPredicted RBP23.03■■□□□ 1.28
PKN1-204ENST00000585839 TRHP20396 242 aaPredicted RBP23.03■■□□□ 1.28
PKN1-204ENST00000585839 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
PKN1-204ENST00000585839 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
PKN1-204ENST00000585839 HECW2Q9P2P5 1572 aa23.02■■□□□ 1.28
PKN1-204ENST00000585839 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
PKN1-204ENST00000585839 AAMPQ13685 434 aa23.02■■□□□ 1.28
PKN1-204ENST00000585839 IL1RAPL2Q9NP60 686 aa23.02■■□□□ 1.28
PKN1-204ENST00000585839 IQSEC2Q5JU85 1478 aa23.01■■□□□ 1.27
PKN1-204ENST00000585839 ARAP3Q8WWN8 1544 aa23.01■■□□□ 1.27
PKN1-204ENST00000585839 LARP6Q9BRS8 491 aaKnown RBP23.01■■□□□ 1.27
PKN1-204ENST00000585839 TSPOAP1O95153 1857 aa23.01■■□□□ 1.27
PKN1-204ENST00000585839 STK31Q9BXU1 1019 aa23■■□□□ 1.27
PKN1-204ENST00000585839 NRXN1Q9ULB1 1477 aa23■■□□□ 1.27
PKN1-204ENST00000585839 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
PKN1-204ENST00000585839 GAS2L2Q8NHY3 880 aa23■■□□□ 1.27
PKN1-204ENST00000585839 CDC45O75419 566 aa22.99■■□□□ 1.27
PKN1-204ENST00000585839 MCTP1Q6DN14 999 aa22.99■■□□□ 1.27
PKN1-204ENST00000585839 XRCC6P12956 609 aaKnown RBP eCLIP22.99■■□□□ 1.27
PKN1-204ENST00000585839 LTKP29376 864 aa22.99■■□□□ 1.27
PKN1-204ENST00000585839 GCC1Q96CN9 775 aa22.99■■□□□ 1.27
PKN1-204ENST00000585839 IL16Q14005 1332 aa22.99■■□□□ 1.27
PKN1-204ENST00000585839 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
PKN1-204ENST00000585839 L1TD1Q5T7N2 865 aaKnown RBP22.98■■□□□ 1.27
PKN1-204ENST00000585839 DDX49Q9Y6V7 483 aaKnown RBP22.98■■□□□ 1.27
PKN1-204ENST00000585839 GSPT1P15170 499 aaKnown RBP22.97■■□□□ 1.27
PKN1-204ENST00000585839 AMOTL2Q9Y2J4 779 aa22.97■■□□□ 1.27
PKN1-204ENST00000585839 TTC21BQ7Z4L5 1316 aa22.97■■□□□ 1.27
PKN1-204ENST00000585839 EID1Q9Y6B2 187 aa22.96■■□□□ 1.27
PKN1-204ENST00000585839 ABTB2Q8N961 1025 aa22.96■■□□□ 1.27
PKN1-204ENST00000585839 NEXMIFQ5QGS0 1516 aa22.96■■□□□ 1.27
PKN1-204ENST00000585839 CHMP4BQ9H444 224 aaKnown RBP22.96■■□□□ 1.27
PKN1-204ENST00000585839 TRIM44Q96DX7 344 aaPredicted RBP22.95■■□□□ 1.27
PKN1-204ENST00000585839 BMP2KLQ5H9B9 411 aa22.95■■□□□ 1.26
PKN1-204ENST00000585839 CASC1Q6TDU7 716 aa22.95■■□□□ 1.26
PKN1-204ENST00000585839 GBP4Q96PP9 640 aa22.95■■□□□ 1.26
PKN1-204ENST00000585839 PUS7Q96PZ0 661 aaKnown RBP22.95■■□□□ 1.26
PKN1-204ENST00000585839 OS9Q13438 667 aaPredicted RBP22.94■■□□□ 1.26
PKN1-204ENST00000585839 PLEKHM2Q8IWE5 1019 aa22.94■■□□□ 1.26
PKN1-204ENST00000585839 ANO2Q9NQ90 1003 aa22.94■■□□□ 1.26
PKN1-204ENST00000585839 CCDC9Q9Y3X0 531 aaKnown RBP22.94■■□□□ 1.26
PKN1-204ENST00000585839 MPNDQ8N594 471 aa22.94■■□□□ 1.26
PKN1-204ENST00000585839 DDX54Q8TDD1 881 aaKnown RBP22.94■■□□□ 1.26
PKN1-204ENST00000585839 PTPRMP28827 1452 aa22.93■■□□□ 1.26
PKN1-204ENST00000585839 K7ELQ4 463 aaPredicted RBP22.92■■□□□ 1.26
PKN1-204ENST00000585839 SDSP20132 328 aa22.92■■□□□ 1.26
PKN1-204ENST00000585839 PKP1Q13835 747 aa22.92■■□□□ 1.26
PKN1-204ENST00000585839 SHPRHQ149N8 1683 aa22.92■■□□□ 1.26
PKN1-204ENST00000585839 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
PKN1-204ENST00000585839 RRAGDQ9NQL2 400 aaPredicted RBP22.92■■□□□ 1.26
PKN1-204ENST00000585839 MAP3K19Q56UN5 1328 aa22.92■■□□□ 1.26
PKN1-204ENST00000585839 GOLGA6L22H0YM25 854 aa22.91■■□□□ 1.26
PKN1-204ENST00000585839 NUTM1Q86Y26 1132 aa22.91■■□□□ 1.26
PKN1-204ENST00000585839 UPF3BQ9BZI7 483 aaKnown RBP22.91■■□□□ 1.26
PKN1-204ENST00000585839 ZGPATQ8N5A5 531 aaKnown RBP22.91■■□□□ 1.26
PKN1-204ENST00000585839 SIGLEC1Q9BZZ2 1709 aa22.9■■□□□ 1.26
PKN1-204ENST00000585839 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
PKN1-204ENST00000585839 MSH6P52701 1360 aa22.9■■□□□ 1.26
PKN1-204ENST00000585839 NEK4P51957 841 aa22.9■■□□□ 1.26
PKN1-204ENST00000585839 ZNF692Q9BU19 519 aaPredicted RBP22.89■■□□□ 1.25
PKN1-204ENST00000585839 TAOK2Q9UL54 1235 aa22.89■■□□□ 1.25
PKN1-204ENST00000585839 LRRC7Q96NW7 1537 aa22.89■■□□□ 1.25
PKN1-204ENST00000585839 PIK3C2BO00750 1634 aa22.89■■□□□ 1.25
PKN1-204ENST00000585839 CAVIN1Q6NZI2 390 aaKnown RBP22.88■■□□□ 1.25
PKN1-204ENST00000585839 CEP85Q6P2H3 762 aa22.88■■□□□ 1.25
PKN1-204ENST00000585839 EYA1Q99502 592 aa22.88■■□□□ 1.25
PKN1-204ENST00000585839 PPLO60437 1756 aa22.88■■□□□ 1.25
PKN1-204ENST00000585839 LMTK2Q8IWU2 1503 aa22.88■■□□□ 1.25
PKN1-204ENST00000585839 SETBP1Q9Y6X0 1596 aa22.88■■□□□ 1.25
PKN1-204ENST00000585839 DDX11L8A8MPP1 907 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms