RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 TRIM34Q9BYJ4 488 aa18.08■□□□□ 0.48
MBD1-212ENST00000585672 SHPRHQ149N8 1683 aa18.08■□□□□ 0.48
MBD1-212ENST00000585672 EXOSC9Q06265 439 aaKnown RBP18.07■□□□□ 0.48
MBD1-212ENST00000585672 RGS22Q8NE09 1264 aa18.07■□□□□ 0.48
MBD1-212ENST00000585672 KIF18AQ8NI77 898 aa18.07■□□□□ 0.48
MBD1-212ENST00000585672 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
MBD1-212ENST00000585672 CT47B1P0C2W7 299 aaPredicted RBP18.07■□□□□ 0.48
MBD1-212ENST00000585672 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
MBD1-212ENST00000585672 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
MBD1-212ENST00000585672 SYCP1Q15431 976 aa18.07■□□□□ 0.48
MBD1-212ENST00000585672 ERICH4A6NGS2 130 aa18.06■□□□□ 0.48
MBD1-212ENST00000585672 CHRM1P11229 460 aaPredicted RBP18.06■□□□□ 0.48
MBD1-212ENST00000585672 NAA30Q147X3 362 aaPredicted RBP18.06■□□□□ 0.48
MBD1-212ENST00000585672 CALCOCO1Q9P1Z2 691 aa18.06■□□□□ 0.48
MBD1-212ENST00000585672 GADD45BO75293 160 aaPredicted RBP18.05■□□□□ 0.48
MBD1-212ENST00000585672 PHF14O94880 888 aa18.05■□□□□ 0.48
MBD1-212ENST00000585672 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
MBD1-212ENST00000585672 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
MBD1-212ENST00000585672 GSPT1P15170 499 aaKnown RBP18.05■□□□□ 0.48
MBD1-212ENST00000585672 IQGAP1P46940 1657 aa18.05■□□□□ 0.48
MBD1-212ENST00000585672 ST18O60284 1047 aa18.04■□□□□ 0.48
MBD1-212ENST00000585672 KDM4AO75164 1064 aa18.04■□□□□ 0.48
MBD1-212ENST00000585672 GCC1Q96CN9 775 aa18.04■□□□□ 0.48
MBD1-212ENST00000585672 PPIP5K1Q6PFW1 1433 aa18.04■□□□□ 0.48
MBD1-212ENST00000585672 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
MBD1-212ENST00000585672 BRD1O95696 1058 aa18.03■□□□□ 0.48
MBD1-212ENST00000585672 KRT222Q8N1A0 295 aa18.03■□□□□ 0.48
MBD1-212ENST00000585672 NOS1P29475 1434 aa18.02■□□□□ 0.48
MBD1-212ENST00000585672 AEBP1Q8IUX7 1158 aa18.02■□□□□ 0.48
MBD1-212ENST00000585672 SECISBP2LQ93073 1101 aaKnown RBP18.02■□□□□ 0.48
MBD1-212ENST00000585672 TRERF1Q96PN7 1200 aa18.02■□□□□ 0.48
MBD1-212ENST00000585672 AP5Z1O43299 807 aa18.02■□□□□ 0.47
MBD1-212ENST00000585672 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
MBD1-212ENST00000585672 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
MBD1-212ENST00000585672 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
MBD1-212ENST00000585672 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
MBD1-212ENST00000585672 PLCB2Q00722 1185 aa18■□□□□ 0.47
MBD1-212ENST00000585672 FEZ2Q9UHY8 353 aaPredicted RBP18■□□□□ 0.47
MBD1-212ENST00000585672 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
MBD1-212ENST00000585672 SMTNL1A8MU46 457 aa17.99■□□□□ 0.47
MBD1-212ENST00000585672 ZBTB9Q96C00 473 aa17.99■□□□□ 0.47
MBD1-212ENST00000585672 C1orf115Q9H7X2 142 aa17.99■□□□□ 0.47
MBD1-212ENST00000585672 FAM53CQ9NYF3 392 aa17.99■□□□□ 0.47
MBD1-212ENST00000585672 FOXD4L6Q3SYB3 417 aaPredicted RBP17.99■□□□□ 0.47
MBD1-212ENST00000585672 FOXD4L3Q6VB84 417 aaPredicted RBP17.99■□□□□ 0.47
MBD1-212ENST00000585672 HNRNPMP52272 730 aaKnown RBP eCLIP17.98■□□□□ 0.47
MBD1-212ENST00000585672 USP48Q86UV5 1035 aa17.98■□□□□ 0.47
MBD1-212ENST00000585672 SPC24Q8NBT2 197 aa17.98■□□□□ 0.47
MBD1-212ENST00000585672 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
MBD1-212ENST00000585672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.98■□□□□ 0.47
MBD1-212ENST00000585672 TPM3P06753 285 aa17.97■□□□□ 0.47
MBD1-212ENST00000585672 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
MBD1-212ENST00000585672 ST7Q9NRC1 585 aa17.97■□□□□ 0.47
MBD1-212ENST00000585672 CEP152O94986 1710 aa17.97■□□□□ 0.47
MBD1-212ENST00000585672 IPO8O15397 1037 aaKnown RBP17.97■□□□□ 0.47
MBD1-212ENST00000585672 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
MBD1-212ENST00000585672 MORC1Q86VD1 984 aa17.97■□□□□ 0.47
MBD1-212ENST00000585672 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
MBD1-212ENST00000585672 KMT5BQ4FZB7 885 aa17.96■□□□□ 0.47
MBD1-212ENST00000585672 CCDC183Q5T5S1 534 aa17.96■□□□□ 0.47
MBD1-212ENST00000585672 TMX3Q96JJ7 454 aa17.96■□□□□ 0.47
MBD1-212ENST00000585672 CLTCL1P53675 1640 aa17.96■□□□□ 0.47
MBD1-212ENST00000585672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.96■□□□□ 0.47
MBD1-212ENST00000585672 ZBTB7BO15156 539 aaPredicted RBP17.96■□□□□ 0.47
MBD1-212ENST00000585672 HNRNPH2P55795 449 aaKnown RBP17.96■□□□□ 0.47
MBD1-212ENST00000585672 PLEKHM2Q8IWE5 1019 aa17.96■□□□□ 0.47
MBD1-212ENST00000585672 C16orf45Q96MC5 204 aaPredicted RBP17.96■□□□□ 0.47
MBD1-212ENST00000585672 DISP1Q96F81 1524 aa17.95■□□□□ 0.46
MBD1-212ENST00000585672 REREQ9P2R6 1566 aa17.95■□□□□ 0.46
MBD1-212ENST00000585672 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
MBD1-212ENST00000585672 INTS3Q68E01 1043 aaKnown RBP17.94■□□□□ 0.46
MBD1-212ENST00000585672 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
MBD1-212ENST00000585672 MX1P20591 662 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 FAM193AP78312 1265 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 TTC22Q5TAA0 569 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 ZNF397Q8NF99 534 aaPredicted RBP17.93■□□□□ 0.46
MBD1-212ENST00000585672 KIAA0556O60303 1618 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 PTGS1P23219 599 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 CYP2C19P33261 490 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 MTHFSP49914 203 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
MBD1-212ENST00000585672 CCDC112Q8NEF3 446 aa17.93■□□□□ 0.46
MBD1-212ENST00000585672 TNNT1P13805 278 aa17.92■□□□□ 0.46
MBD1-212ENST00000585672 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
MBD1-212ENST00000585672 RAD51AP2Q09MP3 1159 aa17.92■□□□□ 0.46
MBD1-212ENST00000585672 ABCC11Q96J66 1382 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 MED14O60244 1454 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 FUCA2Q9BTY2 467 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 PAXBP1Q9Y5B6 917 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 GOLGA6L6A8MZA4 724 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
MBD1-212ENST00000585672 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
MBD1-212ENST00000585672 CHMP4CQ96CF2 233 aa17.91■□□□□ 0.46
MBD1-212ENST00000585672 TPRNQ4KMQ1 711 aa17.9■□□□□ 0.46
MBD1-212ENST00000585672 TRIM35Q9UPQ4 493 aa17.9■□□□□ 0.46
MBD1-212ENST00000585672 YEATS2Q9ULM3 1422 aa17.9■□□□□ 0.46
MBD1-212ENST00000585672 ATP10AO60312 1499 aa17.9■□□□□ 0.46
MBD1-212ENST00000585672 NEK4P51957 841 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms