RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 NFX1Q12986 1120 aaKnown RBP8.6□□□□□ -1.03
CDH8-213ENST00000584966 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
CDH8-213ENST00000584966 DHX29Q7Z478 1369 aaKnown RBP8.6□□□□□ -1.03
CDH8-213ENST00000584966 ADH1BP00325 375 aa8.59□□□□□ -1.03
CDH8-213ENST00000584966 INSM1Q01101 510 aaPredicted RBP8.59□□□□□ -1.03
CDH8-213ENST00000584966 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
CDH8-213ENST00000584966 FER1L4A9Z1Z3 1794 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
CDH8-213ENST00000584966 WIPF1O43516 503 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 E2F4Q16254 413 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 CRIPAKQ8N1N5 446 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 DUOX2Q9NRD8 1548 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 DEPDC5O75140 1603 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 MROH1Q8NDA8 1641 aa8.58□□□□□ -1.04
CDH8-213ENST00000584966 RNF17Q9BXT8 1623 aaKnown RBP8.58□□□□□ -1.04
CDH8-213ENST00000584966 GCC2Q8IWJ2 1684 aa8.57□□□□□ -1.04
CDH8-213ENST00000584966 AXIN1O15169 862 aa8.57□□□□□ -1.04
CDH8-213ENST00000584966 ACTN4O43707 911 aaKnown RBP8.57□□□□□ -1.04
CDH8-213ENST00000584966 ROCK1Q13464 1354 aa8.57□□□□□ -1.04
CDH8-213ENST00000584966 MADDQ8WXG6 1647 aa8.57□□□□□ -1.04
CDH8-213ENST00000584966 CFAP65Q6ZU64 1925 aaKnown RBP8.56□□□□□ -1.04
CDH8-213ENST00000584966 RRP7BPQ9NSQ0 103 aa8.56□□□□□ -1.04
CDH8-213ENST00000584966 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
CDH8-213ENST00000584966 KIF15Q9NS87 1388 aa8.56□□□□□ -1.04
CDH8-213ENST00000584966 CFHP08603 1231 aa8.55□□□□□ -1.04
CDH8-213ENST00000584966 ITGAEP38570 1179 aa8.55□□□□□ -1.04
CDH8-213ENST00000584966 CLTCQ00610 1675 aaKnown RBP8.55□□□□□ -1.04
CDH8-213ENST00000584966 RIMS1Q86UR5 1692 aaKnown RBP8.55□□□□□ -1.04
CDH8-213ENST00000584966 CEP152O94986 1710 aa8.54□□□□□ -1.04
CDH8-213ENST00000584966 AVPP01185 164 aa8.54□□□□□ -1.04
CDH8-213ENST00000584966 DNAJB2P25686 324 aa8.54□□□□□ -1.04
CDH8-213ENST00000584966 LMOD2Q6P5Q4 547 aa8.54□□□□□ -1.04
CDH8-213ENST00000584966 NAIPQ13075 1403 aa8.54□□□□□ -1.04
CDH8-213ENST00000584966 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
CDH8-213ENST00000584966 MROH2AA6NES4 1674 aa8.53□□□□□ -1.04
CDH8-213ENST00000584966 C3P01024 1663 aa8.53□□□□□ -1.04
CDH8-213ENST00000584966 VWDEQ8N2E2 1590 aa8.53□□□□□ -1.04
CDH8-213ENST00000584966 NR1I2O75469 434 aa8.53□□□□□ -1.04
CDH8-213ENST00000584966 TOR4AQ9NXH8 423 aa8.53□□□□□ -1.04
CDH8-213ENST00000584966 ARIH1Q9Y4X5 557 aaPredicted RBP8.53□□□□□ -1.04
CDH8-213ENST00000584966 SETD1BQ9UPS6 1966 aaKnown RBP8.53□□□□□ -1.04
CDH8-213ENST00000584966 ARID4BQ4LE39 1312 aaPredicted RBP8.53□□□□□ -1.04
CDH8-213ENST00000584966 UNC13BO14795 1591 aa8.52□□□□□ -1.04
CDH8-213ENST00000584966 KIF3BO15066 747 aa8.52□□□□□ -1.05
CDH8-213ENST00000584966 MLECQ14165 292 aa8.52□□□□□ -1.05
CDH8-213ENST00000584966 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
CDH8-213ENST00000584966 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
CDH8-213ENST00000584966 PRDM15P57071 1507 aaPredicted RBP8.51□□□□□ -1.05
CDH8-213ENST00000584966 KDM5DQ9BY66 1539 aa8.51□□□□□ -1.05
CDH8-213ENST00000584966 ZC3H13Q5T200 1668 aaKnown RBP8.51□□□□□ -1.05
CDH8-213ENST00000584966 CTC1Q2NKJ3 1217 aa8.51□□□□□ -1.05
CDH8-213ENST00000584966 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
CDH8-213ENST00000584966 KCNV2Q8TDN2 545 aa8.51□□□□□ -1.05
CDH8-213ENST00000584966 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
CDH8-213ENST00000584966 HFM1A2PYH4 1435 aa8.51□□□□□ -1.05
CDH8-213ENST00000584966 GGT6Q6P531 493 aa8.5□□□□□ -1.05
CDH8-213ENST00000584966 PTPRMP28827 1452 aa8.5□□□□□ -1.05
CDH8-213ENST00000584966 ABCC3O15438 1527 aa8.49□□□□□ -1.05
CDH8-213ENST00000584966 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
CDH8-213ENST00000584966 SCUBE3Q8IX30 993 aa8.49□□□□□ -1.05
CDH8-213ENST00000584966 CAMSAP1Q5T5Y3 1602 aa8.49□□□□□ -1.05
CDH8-213ENST00000584966 IQGAP3Q86VI3 1631 aa8.49□□□□□ -1.05
CDH8-213ENST00000584966 LOC100996750A0A140TA64 210 aa8.48□□□□□ -1.05
CDH8-213ENST00000584966 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
CDH8-213ENST00000584966 RBM46Q8TBY0 533 aaKnown RBP8.48□□□□□ -1.05
CDH8-213ENST00000584966 KRTAP4-6Q9BYQ5 205 aa8.48□□□□□ -1.05
CDH8-213ENST00000584966 WDR70Q9NW82 654 aa8.48□□□□□ -1.05
CDH8-213ENST00000584966 LMTK2Q8IWU2 1503 aa8.48□□□□□ -1.05
CDH8-213ENST00000584966 E9PCH4 1651 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 TET3O43151 1660 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 TERTO14746 1132 aaKnown RBP8.47□□□□□ -1.05
CDH8-213ENST00000584966 SLC10A3P09131 477 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 RPIAP49247 311 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 PUS10Q3MIT2 529 aaKnown RBP8.47□□□□□ -1.05
CDH8-213ENST00000584966 SPSB2Q99619 263 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 ZMYM3Q14202 1370 aa8.47□□□□□ -1.05
CDH8-213ENST00000584966 PREX1Q8TCU6 1659 aa8.46□□□□□ -1.05
CDH8-213ENST00000584966 SETD5Q9C0A6 1442 aa8.46□□□□□ -1.05
CDH8-213ENST00000584966 CNTLNQ9NXG0 1405 aa8.46□□□□□ -1.05
CDH8-213ENST00000584966 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
CDH8-213ENST00000584966 SNRPBP14678 240 aaKnown RBP8.46□□□□□ -1.06
CDH8-213ENST00000584966 CEBPAP49715 358 aaPredicted RBP8.46□□□□□ -1.06
CDH8-213ENST00000584966 TTC24A2A3L6 582 aaPredicted RBP8.45□□□□□ -1.06
CDH8-213ENST00000584966 TRIM26Q12899 539 aaPredicted RBP8.45□□□□□ -1.06
CDH8-213ENST00000584966 FAM161AQ3B820 660 aa8.45□□□□□ -1.06
CDH8-213ENST00000584966 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
CDH8-213ENST00000584966 ADGRG1Q9Y653 693 aa8.45□□□□□ -1.06
CDH8-213ENST00000584966 WASHC2CQ9Y4E1 1318 aa8.45□□□□□ -1.06
CDH8-213ENST00000584966 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
CDH8-213ENST00000584966 PZPP20742 1482 aa8.45□□□□□ -1.06
CDH8-213ENST00000584966 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
CDH8-213ENST00000584966 ATP13A2Q9NQ11 1180 aa8.44□□□□□ -1.06
CDH8-213ENST00000584966 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
CDH8-213ENST00000584966 SPATA31D1Q6ZQQ2 1576 aa8.44□□□□□ -1.06
CDH8-213ENST00000584966 HRCP23327 699 aa8.43□□□□□ -1.06
CDH8-213ENST00000584966 FBXO31Q5XUX0 539 aaPredicted RBP8.43□□□□□ -1.06
CDH8-213ENST00000584966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms