RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 TCP11L2Q8N4U5 519 aa18.48■□□□□ 0.55
UBBP4-202ENST00000584755 SALL2Q9Y467 1007 aaPredicted RBP18.48■□□□□ 0.55
UBBP4-202ENST00000584755 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
UBBP4-202ENST00000584755 GCP02774 474 aa18.47■□□□□ 0.55
UBBP4-202ENST00000584755 HOXC9P31274 260 aa18.47■□□□□ 0.55
UBBP4-202ENST00000584755 AMPHP49418 695 aa18.47■□□□□ 0.55
UBBP4-202ENST00000584755 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
UBBP4-202ENST00000584755 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
UBBP4-202ENST00000584755 ARHGEF25Q86VW2 580 aa18.45■□□□□ 0.54
UBBP4-202ENST00000584755 IP6K1Q92551 441 aa18.45■□□□□ 0.54
UBBP4-202ENST00000584755 LMOD2Q6P5Q4 547 aa18.44■□□□□ 0.54
UBBP4-202ENST00000584755 WWC1Q8IX03 1113 aa18.43■□□□□ 0.54
UBBP4-202ENST00000584755 KDRP35968 1356 aa18.43■□□□□ 0.54
UBBP4-202ENST00000584755 MAPK8IP3Q9UPT6 1336 aa18.42■□□□□ 0.54
UBBP4-202ENST00000584755 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
UBBP4-202ENST00000584755 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
UBBP4-202ENST00000584755 CDCA7LQ96GN5 454 aa18.42■□□□□ 0.54
UBBP4-202ENST00000584755 IGSF1Q8N6C5 1336 aa18.42■□□□□ 0.54
UBBP4-202ENST00000584755 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
UBBP4-202ENST00000584755 HMOX1P09601 288 aa18.41■□□□□ 0.54
UBBP4-202ENST00000584755 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
UBBP4-202ENST00000584755 TRMT2AQ8IZ69 625 aaKnown RBP18.41■□□□□ 0.54
UBBP4-202ENST00000584755 ROBO1Q9Y6N7 1651 aa18.41■□□□□ 0.54
UBBP4-202ENST00000584755 ABCC6O95255 1503 aa18.41■□□□□ 0.54
UBBP4-202ENST00000584755 SLFN5Q08AF3 891 aa18.39■□□□□ 0.54
UBBP4-202ENST00000584755 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.54
UBBP4-202ENST00000584755 GTF3C3Q9Y5Q9 886 aa18.39■□□□□ 0.54
UBBP4-202ENST00000584755 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
UBBP4-202ENST00000584755 WDR63Q8IWG1 891 aa18.39■□□□□ 0.53
UBBP4-202ENST00000584755 EYA1Q99502 592 aa18.39■□□□□ 0.53
UBBP4-202ENST00000584755 CPDO75976 1380 aa18.38■□□□□ 0.53
UBBP4-202ENST00000584755 NEFMP07197 916 aa18.38■□□□□ 0.53
UBBP4-202ENST00000584755 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
UBBP4-202ENST00000584755 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
UBBP4-202ENST00000584755 PHACTR3Q96KR7 559 aa18.38■□□□□ 0.53
UBBP4-202ENST00000584755 COL18A1P39060 1754 aa18.37■□□□□ 0.53
UBBP4-202ENST00000584755 E9PSI1 815 aa18.37■□□□□ 0.53
UBBP4-202ENST00000584755 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
UBBP4-202ENST00000584755 TRIM35Q9UPQ4 493 aa18.37■□□□□ 0.53
UBBP4-202ENST00000584755 ABCA3Q99758 1704 aa18.36■□□□□ 0.53
UBBP4-202ENST00000584755 NCAPD2Q15021 1401 aa18.36■□□□□ 0.53
UBBP4-202ENST00000584755 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
UBBP4-202ENST00000584755 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
UBBP4-202ENST00000584755 CAMTA1Q9Y6Y1 1673 aa18.35■□□□□ 0.53
UBBP4-202ENST00000584755 RIPK4P57078 832 aa18.34■□□□□ 0.53
UBBP4-202ENST00000584755 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.53
UBBP4-202ENST00000584755 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.53
UBBP4-202ENST00000584755 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.53
UBBP4-202ENST00000584755 ZC3H6P61129 1189 aaKnown RBP18.33■□□□□ 0.52
UBBP4-202ENST00000584755 LMO7Q8WWI1 1683 aa18.32■□□□□ 0.52
UBBP4-202ENST00000584755 IL16Q14005 1332 aa18.32■□□□□ 0.52
UBBP4-202ENST00000584755 AXIN2Q9Y2T1 843 aa18.32■□□□□ 0.52
UBBP4-202ENST00000584755 DLG5Q8TDM6 1919 aa18.32■□□□□ 0.52
UBBP4-202ENST00000584755 RGPD5Q99666 1765 aa18.31■□□□□ 0.52
UBBP4-202ENST00000584755 COL22A1Q8NFW1 1626 aaPredicted RBP18.31■□□□□ 0.52
UBBP4-202ENST00000584755 TOM1O60784 492 aa18.3■□□□□ 0.52
UBBP4-202ENST00000584755 NBPF6Q5VWK0 638 aa18.3■□□□□ 0.52
UBBP4-202ENST00000584755 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
UBBP4-202ENST00000584755 LRRC59Q96AG4 307 aaKnown RBP18.3■□□□□ 0.52
UBBP4-202ENST00000584755 LTV1Q96GA3 475 aaPredicted RBP18.3■□□□□ 0.52
UBBP4-202ENST00000584755 NBPF4Q96M43 638 aa18.3■□□□□ 0.52
UBBP4-202ENST00000584755 ERBB3P21860 1342 aa18.3■□□□□ 0.52
UBBP4-202ENST00000584755 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
UBBP4-202ENST00000584755 RGPD2P0DJD1 1756 aa18.29■□□□□ 0.52
UBBP4-202ENST00000584755 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
UBBP4-202ENST00000584755 PLEKHG5O94827 1062 aa18.29■□□□□ 0.52
UBBP4-202ENST00000584755 FAM208AQ9UK61 1670 aaKnown RBP18.29■□□□□ 0.52
UBBP4-202ENST00000584755 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
UBBP4-202ENST00000584755 LMOD3Q0VAK6 560 aa18.28■□□□□ 0.52
UBBP4-202ENST00000584755 RCAN3Q9UKA8 241 aa18.28■□□□□ 0.52
UBBP4-202ENST00000584755 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
UBBP4-202ENST00000584755 PHLPP1O60346 1717 aa18.26■□□□□ 0.51
UBBP4-202ENST00000584755 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
UBBP4-202ENST00000584755 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
UBBP4-202ENST00000584755 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
UBBP4-202ENST00000584755 NEFLP07196 543 aa18.24■□□□□ 0.51
UBBP4-202ENST00000584755 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
UBBP4-202ENST00000584755 CHRNA2Q15822 529 aa18.23■□□□□ 0.51
UBBP4-202ENST00000584755 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
UBBP4-202ENST00000584755 ZNF853P0CG23 659 aa18.22■□□□□ 0.51
UBBP4-202ENST00000584755 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
UBBP4-202ENST00000584755 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
UBBP4-202ENST00000584755 HTATSF1O43719 755 aaKnown RBP18.21■□□□□ 0.51
UBBP4-202ENST00000584755 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
UBBP4-202ENST00000584755 FKBP8Q14318 412 aa18.2■□□□□ 0.5
UBBP4-202ENST00000584755 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
UBBP4-202ENST00000584755 COL5A2P05997 1499 aaPredicted RBP18.2■□□□□ 0.5
UBBP4-202ENST00000584755 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
UBBP4-202ENST00000584755 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
UBBP4-202ENST00000584755 HAP1P54257 671 aaPredicted RBP18.2■□□□□ 0.5
UBBP4-202ENST00000584755 CERKQ8TCT0 537 aa18.2■□□□□ 0.5
UBBP4-202ENST00000584755 FAM83GA6ND36 823 aa18.19■□□□□ 0.5
UBBP4-202ENST00000584755 RRP1P56182 461 aaKnown RBP18.19■□□□□ 0.5
UBBP4-202ENST00000584755 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
UBBP4-202ENST00000584755 GNAI1P63096 354 aa18.18■□□□□ 0.5
UBBP4-202ENST00000584755 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
UBBP4-202ENST00000584755 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
UBBP4-202ENST00000584755 CRB1P82279 1406 aa18.18■□□□□ 0.5
UBBP4-202ENST00000584755 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
UBBP4-202ENST00000584755 COL14A1Q05707 1796 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms