RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 HSP90AB2PQ58FF8 381 aa22.63■■□□□ 1.21
CUEDC1-212ENST00000584746 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
CUEDC1-212ENST00000584746 HSP90AA1P07900 732 aaKnown RBP22.61■■□□□ 1.21
CUEDC1-212ENST00000584746 PUS7Q96PZ0 661 aaKnown RBP22.61■■□□□ 1.21
CUEDC1-212ENST00000584746 VIRMAQ69YN4 1812 aaKnown RBP22.61■■□□□ 1.21
CUEDC1-212ENST00000584746 HSCBQ8IWL3 235 aa22.61■■□□□ 1.21
CUEDC1-212ENST00000584746 ARHGEF40Q8TER5 1519 aa22.61■■□□□ 1.21
CUEDC1-212ENST00000584746 MAP2P11137 1827 aaKnown RBP22.61■■□□□ 1.21
CUEDC1-212ENST00000584746 PREX1Q8TCU6 1659 aa22.6■■□□□ 1.21
CUEDC1-212ENST00000584746 NEO1Q92859 1461 aa22.6■■□□□ 1.21
CUEDC1-212ENST00000584746 SLC4A10Q6U841 1118 aa22.6■■□□□ 1.21
CUEDC1-212ENST00000584746 RIMS2Q9UQ26 1411 aa22.59■■□□□ 1.21
CUEDC1-212ENST00000584746 USP32Q8NFA0 1604 aa22.59■■□□□ 1.21
CUEDC1-212ENST00000584746 RBM33Q96EV2 1170 aaKnown RBP22.59■■□□□ 1.21
CUEDC1-212ENST00000584746 TSHZ3Q63HK5 1081 aa22.58■■□□□ 1.21
CUEDC1-212ENST00000584746 PRR36Q9H6K5 1346 aa22.58■■□□□ 1.21
CUEDC1-212ENST00000584746 CFAP74Q9C0B2 1584 aa22.58■■□□□ 1.2
CUEDC1-212ENST00000584746 HSP90AB1P08238 724 aaKnown RBP22.58■■□□□ 1.2
CUEDC1-212ENST00000584746 CT47B1P0C2W7 299 aaPredicted RBP22.57■■□□□ 1.2
CUEDC1-212ENST00000584746 PNPLA6Q8IY17 1366 aa22.57■■□□□ 1.2
CUEDC1-212ENST00000584746 RICTORQ6R327 1708 aa22.57■■□□□ 1.2
CUEDC1-212ENST00000584746 F6X3S4 739 aa22.57■■□□□ 1.2
CUEDC1-212ENST00000584746 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
CUEDC1-212ENST00000584746 MCM4P33991 863 aa22.56■■□□□ 1.2
CUEDC1-212ENST00000584746 PNNQ9H307 717 aaKnown RBP22.56■■□□□ 1.2
CUEDC1-212ENST00000584746 GNAI1P63096 354 aa22.56■■□□□ 1.2
CUEDC1-212ENST00000584746 ARHGAP31Q2M1Z3 1444 aa22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 FAM135BQ49AJ0 1406 aa22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 IL16Q14005 1332 aa22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 AAMPQ13685 434 aa22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 ZNF428Q96B54 188 aa22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 CCDC61Q9Y6R9 512 aa22.55■■□□□ 1.2
CUEDC1-212ENST00000584746 ALDH1L2Q3SY69 923 aa22.54■■□□□ 1.2
CUEDC1-212ENST00000584746 LTV1Q96GA3 475 aaPredicted RBP22.54■■□□□ 1.2
CUEDC1-212ENST00000584746 CPS1P31327 1500 aa22.54■■□□□ 1.2
CUEDC1-212ENST00000584746 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.19
CUEDC1-212ENST00000584746 TRAK2O60296 914 aa22.52■■□□□ 1.19
CUEDC1-212ENST00000584746 GSPT1P15170 499 aaKnown RBP22.51■■□□□ 1.19
CUEDC1-212ENST00000584746 CFAP44Q96MT7 982 aa22.51■■□□□ 1.19
CUEDC1-212ENST00000584746 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
CUEDC1-212ENST00000584746 A2ML1A8K2U0 1454 aa22.51■■□□□ 1.19
CUEDC1-212ENST00000584746 CHAMP1Q96JM3 812 aa22.51■■□□□ 1.19
CUEDC1-212ENST00000584746 ZFYVE9O95405 1425 aa22.51■■□□□ 1.19
CUEDC1-212ENST00000584746 MEIS3Q99687 375 aa22.5■■□□□ 1.19
CUEDC1-212ENST00000584746 CHMP5Q9NZZ3 219 aa22.5■■□□□ 1.19
CUEDC1-212ENST00000584746 ACEP12821 1306 aa22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 FOXD4L5Q5VV16 416 aaPredicted RBP22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 G2E3Q7L622 706 aa22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 FOXD4L4Q8WXT5 416 aaPredicted RBP22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 CLTCQ00610 1675 aaKnown RBP22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 XRCC6P12956 609 aaKnown RBP eCLIP22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 KIF2CQ99661 725 aa22.49■■□□□ 1.19
CUEDC1-212ENST00000584746 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
CUEDC1-212ENST00000584746 SLC4A2P04920 1241 aa22.48■■□□□ 1.19
CUEDC1-212ENST00000584746 TNPO1Q92973 898 aaKnown RBP22.48■■□□□ 1.19
CUEDC1-212ENST00000584746 MED14O60244 1454 aa22.46■■□□□ 1.19
CUEDC1-212ENST00000584746 ZNF853P0CG23 659 aa22.46■■□□□ 1.19
CUEDC1-212ENST00000584746 LTKP29376 864 aa22.46■■□□□ 1.19
CUEDC1-212ENST00000584746 NOL8Q76FK4 1167 aaKnown RBP22.46■■□□□ 1.19
CUEDC1-212ENST00000584746 ROBO2Q9HCK4 1378 aa22.46■■□□□ 1.19
CUEDC1-212ENST00000584746 TPRNQ4KMQ1 711 aa22.45■■□□□ 1.18
CUEDC1-212ENST00000584746 RRAGDQ9NQL2 400 aaPredicted RBP22.45■■□□□ 1.18
CUEDC1-212ENST00000584746 AK9Q5TCS8 1911 aa22.45■■□□□ 1.18
CUEDC1-212ENST00000584746 GOLGA6L3A6NEY3 463 aa22.44■■□□□ 1.18
CUEDC1-212ENST00000584746 GAS2L2Q8NHY3 880 aa22.44■■□□□ 1.18
CUEDC1-212ENST00000584746 KIF20BQ96Q89 1820 aa22.44■■□□□ 1.18
CUEDC1-212ENST00000584746 BMP2KLQ5H9B9 411 aa22.44■■□□□ 1.18
CUEDC1-212ENST00000584746 SSFA2P28290 1259 aa22.44■■□□□ 1.18
CUEDC1-212ENST00000584746 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
CUEDC1-212ENST00000584746 ZMYM3Q14202 1370 aa22.43■■□□□ 1.18
CUEDC1-212ENST00000584746 PLEKHM2Q8IWE5 1019 aa22.43■■□□□ 1.18
CUEDC1-212ENST00000584746 USHBP1Q8N6Y0 703 aa22.43■■□□□ 1.18
CUEDC1-212ENST00000584746 ABCC4O15439 1325 aa22.43■■□□□ 1.18
CUEDC1-212ENST00000584746 EXOC6BQ9Y2D4 811 aa22.42■■□□□ 1.18
CUEDC1-212ENST00000584746 PKP1Q13835 747 aa22.42■■□□□ 1.18
CUEDC1-212ENST00000584746 DTNBO60941 627 aa22.41■■□□□ 1.18
CUEDC1-212ENST00000584746 GCC1Q96CN9 775 aa22.41■■□□□ 1.18
CUEDC1-212ENST00000584746 TTC21BQ7Z4L5 1316 aa22.41■■□□□ 1.18
CUEDC1-212ENST00000584746 MSH6P52701 1360 aa22.41■■□□□ 1.18
CUEDC1-212ENST00000584746 EDC4Q6P2E9 1401 aaKnown RBP22.41■■□□□ 1.18
CUEDC1-212ENST00000584746 CALD1Q05682 793 aaKnown RBP22.4■■□□□ 1.18
CUEDC1-212ENST00000584746 MTHFSDQ2M296 383 aaKnown RBP22.4■■□□□ 1.18
CUEDC1-212ENST00000584746 RBM25P49756 843 aaKnown RBP22.4■■□□□ 1.18
CUEDC1-212ENST00000584746 FOXD4L6Q3SYB3 417 aaPredicted RBP22.4■■□□□ 1.18
CUEDC1-212ENST00000584746 FOXD4L3Q6VB84 417 aaPredicted RBP22.4■■□□□ 1.18
CUEDC1-212ENST00000584746 CPSF1Q10570 1443 aaKnown RBP22.39■■□□□ 1.18
CUEDC1-212ENST00000584746 NGDNQ8NEJ9 315 aaKnown RBP22.39■■□□□ 1.18
CUEDC1-212ENST00000584746 API5Q9BZZ5 524 aaKnown RBP22.39■■□□□ 1.18
CUEDC1-212ENST00000584746 TSPYL4Q9UJ04 414 aa22.39■■□□□ 1.18
CUEDC1-212ENST00000584746 MAP3K19Q56UN5 1328 aa22.38■■□□□ 1.17
CUEDC1-212ENST00000584746 DLG5Q8TDM6 1919 aa22.38■■□□□ 1.17
CUEDC1-212ENST00000584746 NCLP19338 710 aaKnown RBP22.38■■□□□ 1.17
CUEDC1-212ENST00000584746 NCBP3Q53F19 620 aaKnown RBP22.37■■□□□ 1.17
CUEDC1-212ENST00000584746 GAS2L3Q86XJ1 694 aa22.37■■□□□ 1.17
CUEDC1-212ENST00000584746 ANKRD26Q9UPS8 1709 aa22.37■■□□□ 1.17
CUEDC1-212ENST00000584746 AMPHP49418 695 aa22.36■■□□□ 1.17
CUEDC1-212ENST00000584746 CEP85Q6P2H3 762 aa22.36■■□□□ 1.17
CUEDC1-212ENST00000584746 SDSP20132 328 aa22.36■■□□□ 1.17
CUEDC1-212ENST00000584746 CDC45O75419 566 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms