RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 ARHGEF25Q86VW2 580 aa18.69■□□□□ 0.58
CDK5RAP3-234ENST00000584525 MARCH10Q8NA82 808 aaPredicted RBP18.69■□□□□ 0.58
CDK5RAP3-234ENST00000584525 KCNH5Q8NCM2 988 aa18.69■□□□□ 0.58
CDK5RAP3-234ENST00000584525 SIN3AQ96ST3 1273 aa18.69■□□□□ 0.58
CDK5RAP3-234ENST00000584525 TTC21BQ7Z4L5 1316 aa18.69■□□□□ 0.58
CDK5RAP3-234ENST00000584525 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
CDK5RAP3-234ENST00000584525 RREB1Q92766 1687 aa18.68■□□□□ 0.58
CDK5RAP3-234ENST00000584525 SLIT3O75094 1523 aa18.68■□□□□ 0.58
CDK5RAP3-234ENST00000584525 NUP188Q5SRE5 1749 aa18.67■□□□□ 0.58
CDK5RAP3-234ENST00000584525 CARD10Q9BWT7 1032 aa18.67■□□□□ 0.58
CDK5RAP3-234ENST00000584525 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
CDK5RAP3-234ENST00000584525 NINLQ9Y2I6 1382 aa18.66■□□□□ 0.58
CDK5RAP3-234ENST00000584525 PARP4Q9UKK3 1724 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-234ENST00000584525 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-234ENST00000584525 EXOC5O00471 708 aa18.65■□□□□ 0.58
CDK5RAP3-234ENST00000584525 PROM2Q8N271 834 aa18.65■□□□□ 0.58
CDK5RAP3-234ENST00000584525 ZBTB7AO95365 584 aa18.64■□□□□ 0.57
CDK5RAP3-234ENST00000584525 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
CDK5RAP3-234ENST00000584525 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
CDK5RAP3-234ENST00000584525 ROCK2O75116 1388 aaKnown RBP18.63■□□□□ 0.57
CDK5RAP3-234ENST00000584525 STK32BQ9NY57 414 aa18.62■□□□□ 0.57
CDK5RAP3-234ENST00000584525 QRICH2Q9H0J4 1663 aa18.62■□□□□ 0.57
CDK5RAP3-234ENST00000584525 BCL9O00512 1426 aa18.61■□□□□ 0.57
CDK5RAP3-234ENST00000584525 KTN1Q86UP2 1357 aaKnown RBP18.61■□□□□ 0.57
CDK5RAP3-234ENST00000584525 TXNRD1Q16881 649 aa18.61■□□□□ 0.57
CDK5RAP3-234ENST00000584525 PEAK1Q9H792 1746 aa18.6■□□□□ 0.57
CDK5RAP3-234ENST00000584525 LRRC37A3O60309 1634 aa18.6■□□□□ 0.57
CDK5RAP3-234ENST00000584525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDK5RAP3-234ENST00000584525 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
CDK5RAP3-234ENST00000584525 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
CDK5RAP3-234ENST00000584525 CCDC7Q96M83 1385 aa18.58■□□□□ 0.57
CDK5RAP3-234ENST00000584525 SLC15A2Q16348 729 aa18.58■□□□□ 0.56
CDK5RAP3-234ENST00000584525 CCER1Q8TC90 406 aaPredicted RBP18.58■□□□□ 0.56
CDK5RAP3-234ENST00000584525 ACSBG1Q96GR2 724 aa18.57■□□□□ 0.56
CDK5RAP3-234ENST00000584525 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
CDK5RAP3-234ENST00000584525 COL18A1P39060 1754 aa18.56■□□□□ 0.56
CDK5RAP3-234ENST00000584525 PTGER2P43116 358 aa18.56■□□□□ 0.56
CDK5RAP3-234ENST00000584525 TMC1Q8TDI8 760 aa18.55■□□□□ 0.56
CDK5RAP3-234ENST00000584525 TRPM1Q7Z4N2 1603 aa18.54■□□□□ 0.56
CDK5RAP3-234ENST00000584525 NME9Q86XW9 330 aa18.54■□□□□ 0.56
CDK5RAP3-234ENST00000584525 MTFR1LQ9H019 292 aa18.53■□□□□ 0.56
CDK5RAP3-234ENST00000584525 NFAT5O94916 1531 aa18.53■□□□□ 0.56
CDK5RAP3-234ENST00000584525 ERBB3P21860 1342 aa18.52■□□□□ 0.56
CDK5RAP3-234ENST00000584525 TNS2Q63HR2 1409 aa18.52■□□□□ 0.56
CDK5RAP3-234ENST00000584525 IL2RBP14784 551 aa18.52■□□□□ 0.56
CDK5RAP3-234ENST00000584525 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-234ENST00000584525 FHDC1Q9C0D6 1143 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-234ENST00000584525 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.55
CDK5RAP3-234ENST00000584525 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.55
CDK5RAP3-234ENST00000584525 CLSPNQ9HAW4 1339 aa18.51■□□□□ 0.55
CDK5RAP3-234ENST00000584525 ANKRD24Q8TF21 1146 aa18.51■□□□□ 0.55
CDK5RAP3-234ENST00000584525 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
CDK5RAP3-234ENST00000584525 CARD11Q9BXL7 1154 aa18.51■□□□□ 0.55
CDK5RAP3-234ENST00000584525 USP31Q70CQ4 1352 aa18.51■□□□□ 0.55
CDK5RAP3-234ENST00000584525 SLC12A5Q9H2X9 1139 aa18.49■□□□□ 0.55
CDK5RAP3-234ENST00000584525 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
CDK5RAP3-234ENST00000584525 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
CDK5RAP3-234ENST00000584525 SBF2Q86WG5 1849 aa18.48■□□□□ 0.55
CDK5RAP3-234ENST00000584525 ARXQ96QS3 562 aa18.47■□□□□ 0.55
CDK5RAP3-234ENST00000584525 ABCC6O95255 1503 aa18.47■□□□□ 0.55
CDK5RAP3-234ENST00000584525 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-234ENST00000584525 SGIP1Q9BQI5 828 aa18.46■□□□□ 0.55
CDK5RAP3-234ENST00000584525 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
CDK5RAP3-234ENST00000584525 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-234ENST00000584525 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-234ENST00000584525 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
CDK5RAP3-234ENST00000584525 ZNF827Q17R98 1081 aa18.44■□□□□ 0.54
CDK5RAP3-234ENST00000584525 AKAP12Q02952 1782 aa18.44■□□□□ 0.54
CDK5RAP3-234ENST00000584525 CD163L1Q9NR16 1453 aa18.44■□□□□ 0.54
CDK5RAP3-234ENST00000584525 LRRC4BQ9NT99 713 aa18.43■□□□□ 0.54
CDK5RAP3-234ENST00000584525 MYOM1P52179 1685 aa18.43■□□□□ 0.54
CDK5RAP3-234ENST00000584525 EDC4Q6P2E9 1401 aaKnown RBP18.42■□□□□ 0.54
CDK5RAP3-234ENST00000584525 IP6K1Q92551 441 aa18.42■□□□□ 0.54
CDK5RAP3-234ENST00000584525 UTRNP46939 3433 aa18.42■□□□□ 0.54
CDK5RAP3-234ENST00000584525 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
CDK5RAP3-234ENST00000584525 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-234ENST00000584525 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
CDK5RAP3-234ENST00000584525 KLHL34Q8N239 644 aa18.4■□□□□ 0.54
CDK5RAP3-234ENST00000584525 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
CDK5RAP3-234ENST00000584525 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
CDK5RAP3-234ENST00000584525 GPR162Q16538 588 aa18.39■□□□□ 0.53
CDK5RAP3-234ENST00000584525 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
CDK5RAP3-234ENST00000584525 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
CDK5RAP3-234ENST00000584525 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
CDK5RAP3-234ENST00000584525 POLD1P28340 1107 aa18.38■□□□□ 0.53
CDK5RAP3-234ENST00000584525 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
CDK5RAP3-234ENST00000584525 COG3Q96JB2 828 aa18.38■□□□□ 0.53
CDK5RAP3-234ENST00000584525 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
CDK5RAP3-234ENST00000584525 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
CDK5RAP3-234ENST00000584525 AMPHP49418 695 aa18.37■□□□□ 0.53
CDK5RAP3-234ENST00000584525 KCNQ4P56696 695 aa18.37■□□□□ 0.53
CDK5RAP3-234ENST00000584525 SLC16A10Q8TF71 515 aa18.37■□□□□ 0.53
CDK5RAP3-234ENST00000584525 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
CDK5RAP3-234ENST00000584525 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
CDK5RAP3-234ENST00000584525 FBLN1P23142 703 aa18.35■□□□□ 0.53
CDK5RAP3-234ENST00000584525 HOXC9P31274 260 aa18.34■□□□□ 0.53
CDK5RAP3-234ENST00000584525 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-234ENST00000584525 ZCRB1Q8TBF4 217 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-234ENST00000584525 PNPLA7Q6ZV29 1317 aa18.33■□□□□ 0.53
CDK5RAP3-234ENST00000584525 PAPPAQ13219 1627 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms