RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PRKCSHP14314 528 aaPredicted RBP15.42■□□□□ 0.06
RNF43-208ENST00000584437 CCAR1Q8IX12 1150 aaKnown RBP15.42■□□□□ 0.06
RNF43-208ENST00000584437 PDCL3Q9H2J4 239 aa15.42■□□□□ 0.06
RNF43-208ENST00000584437 UPF3BQ9BZI7 483 aaKnown RBP15.42■□□□□ 0.06
RNF43-208ENST00000584437 MAP3K11Q16584 847 aa15.42■□□□□ 0.06
RNF43-208ENST00000584437 TMCO3Q6UWJ1 677 aa15.41■□□□□ 0.06
RNF43-208ENST00000584437 TRIM22Q8IYM9 498 aa15.41■□□□□ 0.06
RNF43-208ENST00000584437 MPNDQ8N594 471 aa15.41■□□□□ 0.06
RNF43-208ENST00000584437 BLOC1S2Q6QNY1 142 aa15.41■□□□□ 0.06
RNF43-208ENST00000584437 TSR2Q969E8 191 aaKnown RBP15.41■□□□□ 0.06
RNF43-208ENST00000584437 SKIDA1Q1XH10 827 aa15.41■□□□□ 0.06
RNF43-208ENST00000584437 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
RNF43-208ENST00000584437 SLC3A2P08195 630 aaKnown RBP15.4■□□□□ 0.06
RNF43-208ENST00000584437 KRT32Q14532 448 aa15.4■□□□□ 0.06
RNF43-208ENST00000584437 SMARCA4P51532 1647 aa15.4■□□□□ 0.06
RNF43-208ENST00000584437 SYCP1Q15431 976 aa15.4■□□□□ 0.06
RNF43-208ENST00000584437 FILIP1Q7Z7B0 1213 aa15.4■□□□□ 0.06
RNF43-208ENST00000584437 RPAP2Q8IXW5 612 aaPredicted RBP15.4■□□□□ 0.06
RNF43-208ENST00000584437 PDRG1Q9NUG6 133 aa15.4■□□□□ 0.06
RNF43-208ENST00000584437 SYCE3A1L190 88 aa15.39■□□□□ 0.05
RNF43-208ENST00000584437 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
RNF43-208ENST00000584437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.39■□□□□ 0.05
RNF43-208ENST00000584437 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.05
RNF43-208ENST00000584437 MSH5O43196 834 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 CDKL5O76039 1030 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 MCM5P33992 734 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 CCDC102AQ96A19 550 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 PTPN14Q15678 1187 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 FAM177A1Q8N128 213 aaPredicted RBP15.38■□□□□ 0.05
RNF43-208ENST00000584437 STK3Q13188 491 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 CCDC158Q5M9N0 1113 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 RBM33Q96EV2 1170 aaKnown RBP15.38■□□□□ 0.05
RNF43-208ENST00000584437 PLCD4Q9BRC7 762 aa15.38■□□□□ 0.05
RNF43-208ENST00000584437 FANCD2Q9BXW9 1451 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 INCENPQ9NQS7 918 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 CALCOCO1Q9P1Z2 691 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 CGNQ9P2M7 1197 aaKnown RBP15.37■□□□□ 0.05
RNF43-208ENST00000584437 KIAA1107Q9UPP5 1409 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 NEFHP12036 1026 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 CCDC183Q5T5S1 534 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 KIF18AQ8NI77 898 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 ERICH4A6NGS2 130 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 FYB1O15117 783 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 SLFN5Q08AF3 891 aa15.37■□□□□ 0.05
RNF43-208ENST00000584437 NOL7Q9UMY1 257 aaKnown RBP15.37■□□□□ 0.05
RNF43-208ENST00000584437 PLEKHH1Q9ULM0 1364 aa15.36■□□□□ 0.05
RNF43-208ENST00000584437 EPB41L2O43491 1005 aaKnown RBP15.36■□□□□ 0.05
RNF43-208ENST00000584437 SFPQP23246 707 aaKnown RBP eCLIP15.36■□□□□ 0.054e-8■■■■□ 21.6
RNF43-208ENST00000584437 ARHGAP29Q52LW3 1261 aa15.36■□□□□ 0.05
RNF43-208ENST00000584437 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
RNF43-208ENST00000584437 HDGFL1Q5TGJ6 251 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 KDM4AO75164 1064 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 KRT18P05783 430 aaKnown RBP15.35■□□□□ 0.05
RNF43-208ENST00000584437 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
RNF43-208ENST00000584437 CFAP70Q5T0N1 1121 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 SEPT7Q16181 437 aaKnown RBP15.35■□□□□ 0.05
RNF43-208ENST00000584437 NBPF8Q3BBV2 869 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 CRACR2AQ9BSW2 395 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 NACAP1Q9BZK3 213 aa15.35■□□□□ 0.05
RNF43-208ENST00000584437 PLEKHH2Q8IVE3 1493 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 CTNNA3Q9UI47 895 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 NLRP6P59044 892 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 NEMFO60524 1076 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 MCM3P25205 808 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 MAP9Q49MG5 647 aa15.34■□□□□ 0.05
RNF43-208ENST00000584437 SCAND2PQ9GZW5 306 aaPredicted RBP15.34■□□□□ 0.05
RNF43-208ENST00000584437 ERBINQ96RT1 1412 aa15.33■□□□□ 0.05
RNF43-208ENST00000584437 SHTN1A0MZ66 631 aa15.33■□□□□ 0.05
RNF43-208ENST00000584437 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.05
RNF43-208ENST00000584437 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
RNF43-208ENST00000584437 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 ANO10Q9NW15 660 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 ERICH3Q5RHP9 1530 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 CCDC69A6NI79 296 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
RNF43-208ENST00000584437 CBX1P83916 185 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 CFAP100Q494V2 611 aa15.33■□□□□ 0.04
RNF43-208ENST00000584437 FAM193AP78312 1265 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 SYTL4Q96C24 671 aaPredicted RBP15.32■□□□□ 0.04
RNF43-208ENST00000584437 CENPHQ9H3R5 247 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 FAM107BQ9H098 131 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 NLRP2Q9NX02 1062 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 ENOX2Q16206 610 aaKnown RBP15.32■□□□□ 0.04
RNF43-208ENST00000584437 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 WASF1Q92558 559 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
RNF43-208ENST00000584437 CCDC57Q2TAC2 916 aa15.31■□□□□ 0.04
RNF43-208ENST00000584437 TANGO6Q9C0B7 1094 aa15.31■□□□□ 0.04
RNF43-208ENST00000584437 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 GIMAP7Q8NHV1 300 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 TAF4BQ92750 862 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
RNF43-208ENST00000584437 DYNC1I1O14576 645 aa15.3■□□□□ 0.04
RNF43-208ENST00000584437 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms