RNA–Protein interactions for RNA: ENST00000584179.1

LINC00473-204, long intergenic non-protein coding RNA 473, humanhuman

TSL 5 BASIC

Gene LINC00473, Length 1,717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473-204ENST00000584179 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
LINC00473-204ENST00000584179 LMOD2Q6P5Q4 547 aa16.26■□□□□ 0.19
LINC00473-204ENST00000584179 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
LINC00473-204ENST00000584179 ROBO1Q9Y6N7 1651 aa16.26■□□□□ 0.19
LINC00473-204ENST00000584179 ABCC6O95255 1503 aa16.26■□□□□ 0.19
LINC00473-204ENST00000584179 AHDC1Q5TGY3 1603 aaPredicted RBP16.26■□□□□ 0.19
LINC00473-204ENST00000584179 HOXC9P31274 260 aa16.25■□□□□ 0.19
LINC00473-204ENST00000584179 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
LINC00473-204ENST00000584179 IP6K1Q92551 441 aa16.25■□□□□ 0.19
LINC00473-204ENST00000584179 DDX17Q92841 729 aaKnown RBP16.25■□□□□ 0.19
LINC00473-204ENST00000584179 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
LINC00473-204ENST00000584179 ZNF521Q96K83 1311 aa16.24■□□□□ 0.19
LINC00473-204ENST00000584179 NEFMP07197 916 aa16.24■□□□□ 0.19
LINC00473-204ENST00000584179 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
LINC00473-204ENST00000584179 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
LINC00473-204ENST00000584179 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
LINC00473-204ENST00000584179 PIP4K2BP78356 416 aa16.23■□□□□ 0.19
LINC00473-204ENST00000584179 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
LINC00473-204ENST00000584179 TOM1O60784 492 aa16.22■□□□□ 0.19
LINC00473-204ENST00000584179 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
LINC00473-204ENST00000584179 CPDO75976 1380 aa16.22■□□□□ 0.19
LINC00473-204ENST00000584179 KDRP35968 1356 aa16.22■□□□□ 0.19
LINC00473-204ENST00000584179 IGSF1Q8N6C5 1336 aa16.2■□□□□ 0.18
LINC00473-204ENST00000584179 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
LINC00473-204ENST00000584179 ABCA3Q99758 1704 aa16.19■□□□□ 0.18
LINC00473-204ENST00000584179 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
LINC00473-204ENST00000584179 LRRC59Q96AG4 307 aaKnown RBP16.19■□□□□ 0.18
LINC00473-204ENST00000584179 COL18A1P39060 1754 aa16.18■□□□□ 0.18
LINC00473-204ENST00000584179 TMPOP42166 694 aaKnown RBP16.18■□□□□ 0.18
LINC00473-204ENST00000584179 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
LINC00473-204ENST00000584179 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
LINC00473-204ENST00000584179 HMOX1P09601 288 aa16.17■□□□□ 0.18
LINC00473-204ENST00000584179 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
LINC00473-204ENST00000584179 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
LINC00473-204ENST00000584179 EYA1Q99502 592 aa16.16■□□□□ 0.18
LINC00473-204ENST00000584179 FAM208AQ9UK61 1670 aaKnown RBP16.16■□□□□ 0.18
LINC00473-204ENST00000584179 COL22A1Q8NFW1 1626 aaPredicted RBP16.16■□□□□ 0.18
LINC00473-204ENST00000584179 RGPD5Q99666 1765 aa16.16■□□□□ 0.18
LINC00473-204ENST00000584179 CAMTA1Q9Y6Y1 1673 aa16.15■□□□□ 0.18
LINC00473-204ENST00000584179 DLG5Q8TDM6 1919 aa16.15■□□□□ 0.18
LINC00473-204ENST00000584179 E9PSI1 815 aa16.15■□□□□ 0.18
LINC00473-204ENST00000584179 NFE2L2Q16236 605 aa16.15■□□□□ 0.18
LINC00473-204ENST00000584179 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
LINC00473-204ENST00000584179 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
LINC00473-204ENST00000584179 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
LINC00473-204ENST00000584179 HSPA1LP34931 641 aa16.14■□□□□ 0.17
LINC00473-204ENST00000584179 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
LINC00473-204ENST00000584179 TRMT2AQ8IZ69 625 aaKnown RBP16.14■□□□□ 0.17
LINC00473-204ENST00000584179 COL16A1Q07092 1604 aaPredicted RBP16.13■□□□□ 0.17
LINC00473-204ENST00000584179 RIPK4P57078 832 aa16.13■□□□□ 0.17
LINC00473-204ENST00000584179 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
LINC00473-204ENST00000584179 LMOD3Q0VAK6 560 aa16.13■□□□□ 0.17
LINC00473-204ENST00000584179 AEBP1Q8IUX7 1158 aa16.13■□□□□ 0.17
LINC00473-204ENST00000584179 CABLES1Q8TDN4 633 aa16.13■□□□□ 0.17
LINC00473-204ENST00000584179 PHACTR3Q96KR7 559 aa16.13■□□□□ 0.17
LINC00473-204ENST00000584179 ERBB3P21860 1342 aa16.12■□□□□ 0.17
LINC00473-204ENST00000584179 IL16Q14005 1332 aa16.12■□□□□ 0.17
LINC00473-204ENST00000584179 NEUROD2Q15784 382 aa16.12■□□□□ 0.17
LINC00473-204ENST00000584179 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
LINC00473-204ENST00000584179 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
LINC00473-204ENST00000584179 KIAA0232Q92628 1395 aa16.12■□□□□ 0.17
LINC00473-204ENST00000584179 PLEKHG2Q9H7P9 1386 aa16.12■□□□□ 0.17
LINC00473-204ENST00000584179 RGPD2P0DJD1 1756 aa16.11■□□□□ 0.17
LINC00473-204ENST00000584179 LMO7Q8WWI1 1683 aa16.11■□□□□ 0.17
LINC00473-204ENST00000584179 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
LINC00473-204ENST00000584179 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
LINC00473-204ENST00000584179 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
LINC00473-204ENST00000584179 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
LINC00473-204ENST00000584179 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
LINC00473-204ENST00000584179 ZBTB7CA1YPR0 619 aa16.1■□□□□ 0.17
LINC00473-204ENST00000584179 LTV1Q96GA3 475 aaPredicted RBP16.1■□□□□ 0.17
LINC00473-204ENST00000584179 HAP1P54257 671 aaPredicted RBP16.09■□□□□ 0.17
LINC00473-204ENST00000584179 PRDM11Q9NQV5 511 aa16.09■□□□□ 0.17
LINC00473-204ENST00000584179 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.17
LINC00473-204ENST00000584179 GAS2L2Q8NHY3 880 aa16.08■□□□□ 0.17
LINC00473-204ENST00000584179 NBPF4Q96M43 638 aa16.08■□□□□ 0.17
LINC00473-204ENST00000584179 PLEKHG5O94827 1062 aa16.08■□□□□ 0.16
LINC00473-204ENST00000584179 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
LINC00473-204ENST00000584179 COL14A1Q05707 1796 aaKnown RBP16.06■□□□□ 0.16
LINC00473-204ENST00000584179 HTATSF1O43719 755 aaKnown RBP16.05■□□□□ 0.16
LINC00473-204ENST00000584179 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
LINC00473-204ENST00000584179 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
LINC00473-204ENST00000584179 CHRNA2Q15822 529 aa16.04■□□□□ 0.16
LINC00473-204ENST00000584179 AMOTQ4VCS5 1084 aa16.04■□□□□ 0.16
LINC00473-204ENST00000584179 RCAN3Q9UKA8 241 aa16.04■□□□□ 0.16
LINC00473-204ENST00000584179 SUPT16HQ9Y5B9 1047 aaKnown RBP16.04■□□□□ 0.16
LINC00473-204ENST00000584179 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
LINC00473-204ENST00000584179 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
LINC00473-204ENST00000584179 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
LINC00473-204ENST00000584179 WDR17Q8IZU2 1322 aa16.03■□□□□ 0.16
LINC00473-204ENST00000584179 NEFLP07196 543 aa16.02■□□□□ 0.16
LINC00473-204ENST00000584179 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.16
LINC00473-204ENST00000584179 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.15
LINC00473-204ENST00000584179 IFT57Q9NWB7 429 aa16.02■□□□□ 0.15
LINC00473-204ENST00000584179 CSB-PGBD3P0DP91 1061 aa16.01■□□□□ 0.15
LINC00473-204ENST00000584179 GNAI1P63096 354 aa16.01■□□□□ 0.15
LINC00473-204ENST00000584179 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
LINC00473-204ENST00000584179 NLRP2Q9NX02 1062 aa16.01■□□□□ 0.15
LINC00473-204ENST00000584179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
LINC00473-204ENST00000584179 FAM83GA6ND36 823 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms